New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2290113	NA (NA)	3 (0.120)	3/486	2.8	12.5%	noncoding (1/1195 nt)	IS5	repeat region
	?	NC_000913	2421265 =	21 (0.820)					coding (645/648 nt)	yfcG	disulfide bond oxidoreductase YfcG
Rejected: Frequency below/above cutoff threshold.

ACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCCGGCAGTCAAGAACTGGCATGAGCGGATCCGTTCGCGCCCTGCCACCGGGCAGGCACTGCTAAAAGCACAACTCGGTGATGAGCGTTCGGATAGTTAACAGAAACAGGTTCTCGTGTATTATTTCATCCTAAGTAAAACAACGGAGAACCTGCAATGGCACAACCTGCCGCTATTATTCGTATAAAGAACCTTCGTTTGCGTACGTTTATCGGAATTAAGGAAGAAGAAATTAACAACCGTCAGGATATTGTTATCAATGTGACGATCCACTACCCCGCCGATAAAGCGCGCACTAGCGA  >  NC_000913/2421029‑2421470                                                                                                                                                                                                                                             |                                                                                                                                                                                                              caccagcgcctggtccATTTACGGAAAAAGCGGCATGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTTGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCCGGCAGTCAAGAACTGGCATGAGCGGATCCGTTCGCGCCCTGCCACCGGGCAGTCACTGCTAAAAGCACAACTCGGTGATGAGCGTTCTGATAGTTAACAGAAACatgt                                                                                                                                                                                                 <  2:264347/237‑4 (MQ=255) acgcAGCGTCTTTACCATGTACTGAACAAGCGGCTTGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTTCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCCGGCAGTCAAGAACTGGCATGAGCGGATCCGTTCGCGCCCTGCCACCGGTCAGGCACGGCTAAAAGCACAACTCGGTGATGAGCGGTCGGATAGTTAACAGAAACAGGt                                                                                                                                                                                                 <  2:36869/248‑1 (MQ=255)            ttgccATGTACTGAACAAGCGGTTGTAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGTTATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCCGGCAGTCAAGAACTGGCATGAGCGGATCCGTTCGCGCCCTGCCACCGGGCAGGCACTGCTAAAAGCACAACTCGGTGATGAGCGTTCGGATAGTTAACAGAAACAGGTTCTCGTGtat                                                                                                                                                                                       <  2:87659/247‑1 (MQ=255)                                      aaaaCTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCCGGCAGTCAAGAACTGGCATGAGCGGATCCGTTCGCGCCCTGCCACCGGGCAGGCACTGCTAAAAGCATAACTCGGTGATGAGCGTTCGGATAGTTAACAGAAACAGGTTCTCGTGTATTATTTCATCCTAAGTAAAACACCGgag                                                                                                                                                            <  2:87797/251‑1 (MQ=255)                                          gcttgatgactttcaccattttttgccatggcagatactgctccatgcgggacaagaaactctctttccttgtctgacggcgcttactgctgaattcactgtcggcgaagggaagttgatgactcatgatgatccctgttctatggctccagattacaaacatgatctcatatcatgtacttgttctcaccttccTTAACAGAAACAGGTTCTCGTGTATTATTTCATCCTAAGTAAAACAACTGAGAAcc                                                                                                                                                        <  2:22110‑M2/56‑1 (MQ=255)                                                 tggctggGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCCGGCAGTCAAGAACTGGCATGAGCGGATCCGTTCGCGCCCTGCCACCGGGCAGGCACTGCTAAAAGCACAACTCGGTGATGAGCGTTCGGATAGTTAACAGAAACAGGTTCTCGTGTATTATTTCATCCTAAGTAAAACAACGGAGAACCTGCAATg                                                                                                                                                 >  1:116988/1‑251 (MQ=255)                                                   gctggGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCCGGCAGTCAAGAACTGGCATGAGCGGATCCGTTCGCGCCCTGCCACCGGGCAGGCACTGCTAAAAGCACAACTCGGTGATGAGCGTTCGGATAGTTAACAGAAACAGGTTCTCGTGTATTATTTCATCCTAAGTAAAACAACGGAGAACCTGCAATGGc                                                                                                                                               <  1:49834/251‑1 (MQ=255)                                                    ctggGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCCGGCAGTCAAGAACTGGCATGAGCGGATCCGTTCGCGCCCTGCCACCGGGCAGGCACTGCTAAAAGCACAACTCGGTGATGAGCGTTCGGATAGTTAACAGACACAGGTTCTCGTGTATTATTTCATCCTAAGTAAAACAACGGAGAACCTGCAATGGcc                                                                                                                                              >  1:47198/1‑250 (MQ=255)                                                    ctggGAGGCGAGAAATACAGCATTGAGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCCGGCAGTCAAGAACTGGCATGAGCGGATCCGTTCGCGCCCTGCCACCGGGCAGGCACTGCTAAAAGCCCACCTCGGTGATGAGCGTTCGGATAGTTAACAGAAACAGGTTCTCGTGTATTATTTCCTCCTAAGTAAAACAACGGAGAACATGCAATggac                                                                                                                                              >  2:35714/1‑249 (MQ=255)                                                         aGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCCGGCAGTCAAGAACTGGCATGAGCGGATCCGTTCGCGCCCTGCCACCGGGCAGGCACTGCTAAAAGCACAACTCGGTGATGAGCGTTCGGATAGTTAACAGAAACAGGTTCTCGTGTATTATTTCATCCTAAGTAAAACAACGGAGAACCTGCAATGGCACAAcc                                                                                                                                         <  1:220283/251‑1 (MQ=255)                                                                                  atTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCCGGCAGTCAAGAACTGGCATGAGCGGATCCGTTCGCGCCCTGCCACCGGGCAGGCACTGCTAAAAGCACAACTCGGTGATGAGCGTTCGGATAGTTAACAGAAACAGGTTCTCGTGTATTATTTCATCCTAAGTAAAACAACGGAGAACCTGCAATGGCACAACCTGCCGCTATTATTCGTATAAAGAAc                                                                                                                <  1:20798/251‑1 (MQ=255)                                                                                    tGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCCGGCAGTCAAGAACTGGCATGAGCGGATCCGTTCGCGCCCTGCCACCGGGCAGGCACTGCTAAAAGCACAACTCGGTGATGAGCGTTCGGATAGTTAACAGAAACAGGTTCTCGTGTATTATTTCATCCTAAGTAAAACAACGGAGAACCTGCAATGGCACAACCTGCCGCTATTATTCGTATAAAGAACCt                                                                                                              >  1:285799/1‑251 (MQ=255)                                                                                         cgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatgtctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACAGAAACAGGTTCTCGTGTATTATTTCATCCTAAGTAAAACAACGGAGAACCTGTAATGGCACAACCTGCCGCtatt                                                                                                                               <  2:109812‑M2/81‑1 (MQ=255)                                                                                         cgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatgtctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAACAGAAACAGGTTCTCGTGTATTATTTCATCCTAAGTAAAACAACGGAGAACCTGTAATGGCACAACCTGCCGCtatt                                                                                                                               >  1:109812‑M2/149‑229 (MQ=255)                                                                                                 ggggTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCCGGCAGTCAAGAACTGGCATGAGCGGATCCGTTCGCGCCCTGCCCCCGGGCAGGCACTGCTAAAAGCACAACTCGGTGATGAGCGTTCGGATAGTTAACAGAAACAGGTTCGCGTGTATTATTTCATCCTAAGTAAAACAACGGAGAACCTGCAATGGCCCAACCTGCCGCTATTAGTCGTATAAAGAACCTTCGTTTGCGTACg                                                                                                 <  2:47198/250‑1 (MQ=255)                                                                                                          gCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCCGGCAGTCAAGAACTGGCATGAGCGGATCCGGTCGCGCCCTGCCACCGGGCAGGCACTGCTAAAAGCACAACTCGGTGATGAGCGTTCGGATAGTTAACAGAAACAGGTTCTCGTGTATTATTTCATCCTAAGGAAAACAACGGAGAACCTGCAATGGCACAACCTGCCGCTATTATTCGTATAAAGAACCTTCGTTTGCGTACGTTTATCgg                                                                                         <  1:35714/250‑1 (MQ=255)                                                                                                             tggaaacGCCAGCGAATTGACCTAGCAATGTATCAGGCTGTCAAGAACTGGCATGAGCGGATCCGTTCGCGCCCTGCCACCGGGCAGGCACTGCTAAAAGCACACCTCGGTGATGAGCGTTCGGATAGTTAACAGAAACAGGTTCTCGTGTATTATTTAATCCTAAGTAAAACAACGGAGAACCTGCAATGGCTCAACCTGCCGCTATTATTCGAATAAAGAACCATCGCTTGCGTACGTTTATCGGAAtt                                                                                     >  1:10110/7‑251 (MQ=255)                                                                                                                              tGACCTAGCAATGTATCCGGCAGTCAAGAACTGGCATGAGCGGCTCCGTTCGCGCCCTGCCACCGGGCAGGCACTGCTAAAAGCACAACTCGGTGATGAGCGTTCGGCTAGTTCACAGAAACAGGTTCTCGTGTATTATTTCATCCTAAGTAAAACAACGGAGAACCTGCAATGGCACAACCTGCCGCTATTATTCGTATAAAGAACCTTCGTTTGCGTACGTTTATCGGAATTAAGGAAGAAGACATTa                                                                     >  1:14552/1‑250 (MQ=255)                                                                                                                                                        aGAACTGGCATGAGCGGATCCGTTCGCGCCCTGCCACCGGGCAGGCACTGCTAAAAGCACAACTCGGTGATGAGCGTTCGGATAGTTAACAGAAACAGGTTCTCGTGTATTATTTCATCCTAAGTAAAACAACGGAGAACCTGCAATGGCACAACCTGCCGCTATTATTCGTATAAAGAACCTTCGTTTGCGTACGTTTATCGGAATTAAGGAAGAAGAAATTAACAACCGTCAGGATATTGTTATCAAtt                                          >  2:193393/1‑250 (MQ=255)                                                                                                                                                            cTGGCATGAGCGGATCCGTTCGCGCCCTGCCACCGGGCAGGCACTGCTAAAAGCACAACTCGGTGATGAGCGTTCGGATAGTTAACAGAAACAGGTTCTCGTGTATTATTTCATCCTAAGTAAAACAACGGAGAACCTGCAATGGCACAACCTGCCGCTATTATTCGTATAAAGAACCTTCGTTTGCGTACGTTTATCGGAATTAAGGAAGAAGAAATTAACAACCGTCAGGATATTGTTATCAATGTGAc                                      >  1:102707/1‑251 (MQ=255)                                                                                                                                                                      cGGATCCGTTCGCGCCCTGCCACCGGGCAGGCACTGCTAAAAGCACAACTCGGTGATGAGCGTTCGGATAGTTAACAGAAACAGGTTCTCGTGTATTATTTCATCCTAAGTAAAACAACGGAGAACCTGCAATGGCACAACCTGCCGCTATTATTCGTATAAAGAACCTTCGTTTGCGTACGTTTATCGGAATTAAGGAAGAAGAAATTAACAACCGTCAGGATATTGTTATCAATGTGACGATCCACTAc                            <  1:189732/251‑1 (MQ=255)                                                                                                                                                                                   gcCCTGCCACCGGGCAGGCACTGCTAAAAGCACAACTCGGTGATGAGCGTTCGGATAGTTAACAGAAACAGGTTCTCGTGTATTATTTCATCCTAAGTAAAACAACGGAGAACCTGCAATGGCACAACCTGCCGCTATTATTCGTATAAAGAACCTTCGTTTGCGTACGTTTATCGGAATTAAGGAAGAAGAAATTAACAACCGTCAGGATATTg                                                   <  1:130704/215‑1 (MQ=255)                                                                                                                                                                                       tGCCACCGGGCAGGCACTGCTAAAAGCACAACTCGGTGATGAGCGTTCGGATAGTTAACAGAAACAGGTTCTCGTGTATTATTTCATCCTAAGTAAAACAACGGAGAACCTGCAATGGCACAACCTGCCGCTATTATTCGTATAAAGAACCTTCGTTTGCGTACGTTTATCGGAATTAAGGAAGAAGAAATTAACAACCGTCAGGATATTGTTATCAATGTGACGATCCACTACCCCGCCGATAAAgcgcg           >  1:289421/1‑251 (MQ=255)                                                                                                                                                                                                 caggccatGCTAAAAGCACAACTCGGTGCTGAGCGTCCGGATAGTTAACAGAAACAGGCTATCGTGCATTATTTCATCCTAAGTAAAACAACGGAGAACCTGAAATGGCACAACCTGCCGCTATTATTCGTATAAAGAACATTCGTTTGCGTACGTTTATCGGACTTAAGGAAGAAGAAATTAACAACCGTCAGGATATTGTTATCAATGAGACGATCAACTACCCCGCCGATAAAGCGCGAACTAGCGa  >  2:144212/8‑250 (MQ=255)                                                                                                                                                                                                                                             |                                                                                                                                                                                                              ACTCAGCGTCTTTACCATGTACTGAACAAGCGGCTGGAAAACTCGCCCTGGCTGGGAGGCGAGAACTACAGCATTGCGGATATTGCCTGCTGGCCGTGGGTTAATGCCTGGACTCGCCAGCGAATTGACCTAGCAATGTATCCGGCAGTCAAGAACTGGCATGAGCGGATCCGTTCGCGCCCTGCCACCGGGCAGGCACTGCTAAAAGCACAACTCGGTGATGAGCGTTCGGATAGTTAACAGAAACAGGTTCTCGTGTATTATTTCATCCTAAGTAAAACAACGGAGAACCTGCAATGGCACAACCTGCCGCTATTATTCGTATAAAGAACCTTCGTTTGCGTACGTTTATCGGAATTAAGGAAGAAGAAATTAACAACCGTCAGGATATTGTTATCAATGTGACGATCCACTACCCCGCCGATAAAGCGCGCACTAGCGA  >  NC_000913/2421029‑2421470

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.