| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,238,948 | Δ1 bp :: IS186 (–) +6 bp :: Δ2 bp | coding (337‑342/1521 nt) | mglA ← | D‑galactose/methyl‑galactoside ABC transporter ATP binding subunit |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2238948 = | 0 (0.000) | 15 (0.590) | 15/482 | 0.6 | 100% | coding (342/1521 nt) | mglA | D‑galactose/methyl‑galactoside ABC transporter ATP binding subunit |
| ? | NC_000913 | 2514275 = | NA (NA) | noncoding (3/1345 nt) | IS186 | repeat region | |||||
| * | ? | NC_000913 | = 2238953 | 0 (0.000) | 18 (0.710) | 18/480 | 0.4 | 100% | coding (337/1521 nt) | mglA | D‑galactose/methyl‑galactoside ABC transporter ATP binding subunit |
| ? | NC_000913 | = 2515616 | NA (NA) | noncoding (1344/1345 nt) | IS186 | repeat region | |||||
CTCTTTTAATTTACGAATAATAGTGAACAGATGATTGACCTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCCTTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGCTTCTTTTGCAGAATGGAAATCGATCTCTTTACCCTGGAATAAAATGGTGCCGGAGTCTTTTTGATAAATACCAAACAGGCATTTTAATAATGTCGATTTTCCTGCACCGTTTTCCCCCATTAATGCATGGATAGAATGTGGCCGGACTTTTAAATT > NC_000913/2238699‑2239193 | gagcccatgcagtgacttcacgtaatgacatccccccggggccgtaagccagccccagacgtagcagagttgcagcatcacgaatttcgcggcggcgggttagagccccggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgga > 1:21281‑M1/250‑250 (MQ=255) gcagtgacttcacgtaatgacatccccccggggccgtaagccagccccagacgtagcagagttgcagcatcacgaatttcgcggcggcgggttagagccccggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttcaatcatatcaggcgtaataccacaacccttaagttagcgcttatggATATCGcccc < 1:164555‑M1/10‑1 (MQ=255) gAACAGATGATTGACCTCTTTTTCGGTTAACGAATAAGTCTGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTTGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCCTTTGGTGGGATATCGcccataagcgctaacttaa < 1:222781‑M1/250‑20 (MQ=255) cAGATGATTGACCTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTAAAAAATCGCTTTGGTTTAGCGGTACATTTTGTCCTGATCGACAAACATGCCTTTGGTGGGATATCGcccataagcgctaacttaagggt > 1:92395‑M1/1‑228 (MQ=255) ttCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGTATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCCTTTGGTGGGATATCGcccataagcgctaacttaagggttgaaccatctgaagaat < 1:207060‑M1/250‑41 (MQ=255) cagagttgcagcatcacgaatttcgcggcggcggggtagagccccggcattacgtgccgaagtatccagttcttcgggcgtaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatggATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTAc > 2:20423‑M1/186‑251 (MQ=255) gcagaacaacgaatttcgcggctgcgggttagagccccggcattacgggccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacggtaaatcatatcaggcgtaataccacaacccttaagttagcgcttatggATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGa > 2:154117‑M1/179‑250 (MQ=255) atcacgaatttcgcggcggcgggttagagccccggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatggATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATAcc > 1:4515‑M1/174‑251 (MQ=255) cgTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCCGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCCTTTGGTGGGGTATCGcccataagcgctaacttaagggttgaaccctctgcagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttca > 1:288820‑M1/1‑166 (MQ=255) aaaCGCTTTGGCGATTTCGATCATCTGCATTTGCGACCCGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAACATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCCTTTGGTGGGATATCGcccataagcgctaacttaagggttgaaccatctgaagaatgcgacacctcggtgcctcgttaggacgatgcctcgcgttcttcaattgcgttttg > 2:269579‑M1/1‑156 (MQ=255) ccccggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatggATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGTAATACCATTTTCCAGGGCTTCTTTTGCAGAATgg < 1:20656‑M1/106‑1 (MQ=255) cgtgccgaagtatcctgttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatggATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGCTTCTTTTGCAGAATGGAAATCGATctct < 2:35946‑M1/118‑1 (MQ=255) cGATCATCGGCATTTGCGAAACTGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCCTTTGGTGGGATATCGcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagtcgaggcctc < 2:49219‑M1/213‑75 (MQ=255) tGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCCTTTGGTGGGATATCGcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcatcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccac > 1:157484‑M1/1‑131 (MQ=255) cagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatggATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATATCATTTTCCAGGGCTTCTTTTGCAGAATGGAAATCGATCTCTTTACCCTGGAATa < 1:234742‑M1/131‑1 (MQ=255) agttcttagggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcataggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatggATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGCTTCTTTTGCAGAATGGAAATCGATCTCTTTACCCTGGAATaa < 1:33147‑M1/132‑1 (MQ=255) gATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCCTTTGGTGGGATATCGcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggccacctgta < 1:210033‑M1/251‑136 (MQ=255) ccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcgacacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatggATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGCTTCTTTTGCAGAATGGAAATCGATCTCTTTACCCTGGAATCAAATGGTGCCGGAGTCt < 1:255924‑M1/148‑1 (MQ=255) gcACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTTATCGACAAACATGCCTTTGGTGGGATATCGcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggccacctgtaagctccagatgaccattt < 1:194130‑M1/251‑154 (MQ=255) gATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCCTTTGGTGGGATATCGcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggccacctgtaagctccagatgaccatttttgttat > 1:232054‑M1/1‑91 (MQ=255) atatCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGCCAAACATGCCTTTGGTGGGATATCGcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttaaattgcgttttgtaggctgtcagggatactgtcccacgaatggccacatgtaagctccagatgaccatttttgttattctcc > 1:295604‑M1/1‑86 (MQ=255) agttatcgtgagagtaattcatcggaacgttaaatcatatcaggcgtaataccacaaaccttaagttagcgcttatggATATCGCCCAAGCCACATGTTATACATAACCGAACGTTGTAATACAAGGTTTACATCATGGTGTACCATCGAAATACCATTTTCCAGGGCTTCTTTTGCAGAATGAAAATCGATCTCTTTACCATGGAATAAAATGGAGCCGGAGTCTTTTTTATAAATAcaaaacaagaatt < 2:154635‑M1/173‑7 (MQ=255) ccAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCCTTTGGTGGGATATCGcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggccacctgtaagctccagatgaccatttttgttattctccacaacgagtt < 1:84619‑M1/251‑176 (MQ=255) cGTCAAAAATCGCTTTTGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCCTTTGGTGGGATATCGcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggccacctgtaagctccagatgaccatttttgttattctccacaacgagttagttct < 2:288820‑M1/251‑182 (MQ=255) attcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatggATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGCTTCTTTTGCAGAATGGAAATCGATCTCTTTACCCTGGAATAAAATGGTGCCGGAGTCTTTTTGATAAATACCAAACAGGCATTTTAATAATGTCGAttt > 1:191880‑M1/63‑251 (MQ=255) cAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCCTTTGGTGGGATATCGcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgactggccacctgtaagcaccagatgaccatttttgttattctccacaacgagttagttcttct > 2:233187‑M1/1‑67 (MQ=255) tcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatggATATCGCCCCAACCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGCTTCTTTTTCAGCATGGAAATCGATCTCTTTACCCTGGAATAAAATGGTGCCGGAGTCTTTTTGATAAATACCAAACAGGCATTTTAATAATGTCGATTTTc < 1:160014‑M1/191‑1 (MQ=255) ggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatggATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGCTTCTTTTGCAGAATGGAAATCGATCTCTTTACCCTGGAATAAAATGGTGCCGGAGTCTTTTTGATAAATACCAAACAGGCATTTTCATAATGTCGATTTTCCTGc < 1:95622‑M1/195‑1 (MQ=255) ttGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCCTTTGGTGGGATATCGcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggccacctgtaagctccagatgaccatttttgttattctccacaacgagttagttcttcttttcggatcc < 1:229527‑M1/250‑195 (MQ=255) atcaggcgtaataccacaacccttaagttagctcttatggATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTTTAATACCAGGTTTAACGCCTGGTGTACCATCGAAATACCATTTTCCAGGGCTTCTTTTGCAGAATGGAAATCGATCTCTTTACCCTGGAATAAAATGGTGCCGGAGTCTTTTTGATAAATACCAAACAGGCATTTTAATAATGTCGATTTTCCTGCACCGTTTTCCCCCAt > 2:224244‑M1/41‑250 (MQ=255) tttGTCCTGATCGACAAACATGCCTTTGGTGGGATATCGcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggccacctgtaagctccagatgaccatttttgttattctccacaacgagttagttcttcttttcggatccggcacttctggggggga < 1:5226‑M1/250‑212 (MQ=255) cGACAACCATGCCTTTGGTGGGATATCGcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggccacctgtaagctccagatgaccatttttgttattctccacaacgagttagttcttcttttcggatccggcacttctggggggatactccagcgatg > 2:224499‑M1/1‑28 (MQ=255) tggGATATCGcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggccacctgtaagctccagatgaccatttttgttattctccacaacgagttagttcttcttttcggatccggcacttctgggggggaaatccagcgatggctggattatgtcgtca > 2:273339‑M1/1‑10 (MQ=255) | CTCTTTTAATTTACGAATAATAGTGAACAGATGATTGACCTCTTTTTCGGTTAACGAAGAAGTCGGTTCATCCATAATCACAATTTTCGCGTTATAGGAAAACGCTTTGGCGATTTCGATCATCTGCATTTGCGAAACGGATAATGTGCCGACGCGCGCACGCGGATCGATATCAATATCCAGTTCGTCAAAAATCGCTTTGGTTTCGCGGTACATTTTGTCCTGATCGACAAACATGCCTTTGGTGGGATATCGCCCCAGCCACATGTTATCCATCACCGAACGTTGTAATACCAGGTTTAACTCCTGGTGTACCATCGAAATACCATTTTCCAGGGCTTCTTTTGCAGAATGGAAATCGATCTCTTTACCCTGGAATAAAATGGTGCCGGAGTCTTTTTGATAAATACCAAACAGGCATTTTAATAATGTCGATTTTCCTGCACCGTTTTCCCCCATTAATGCATGGATAGAATGTGGCCGGACTTTTAAATT > NC_000913/2238699‑2239193 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |