New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 256107	2 (0.080)	15 (0.610)	14/470	0.6	57.8%	coding (131/459 nt)	gpt	xanthine‑guanine phsophoribosyltransferase
	?	NC_000913	371382 =	20 (0.810)					coding (144/867 nt)	mhpC	2‑hydroxy‑6‑ketonona‑2,4‑dienedioate hydrolase

CTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAACACTTTTTAAGCCGTAGATAAACAGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCGTTACTGGCGCGTGAACTGGGTATTCGTCATGTCGATACCGTTTGTATTTCCAGCTACGATCACGACAACCAGCGCGAGCTTAAAGTGCTGAAACGCGCAGAAGGCGATGGCGAAGGCTTCATCGTTATTGATGACCTGGTGGATACCGGTGGTACTGCGGTTGCGATTCGTGAAATGTATCCAAAAGCGCACTTTGTCACCATCTTCGCAAAA  >  NC_000913/255881‑256321                                                                                                                                                                                                                                   |                                                                                                                                                                                                                       cTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAACACTTTTTAAGCCGTAGATAAACAGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCtactggctgggcgaaattcagccg                                                                                                                                                                                                >  1:271528‑M1/1‑227 (MQ=255)                        ctATAATCTCGCGCAACCTATTTTCCCCTCGAACACTTTTTAAGCCGTAGATAAACAGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGGACCGGGGGCtaatggctgggcgaacttcagccgcaatatcgatccgctgggagagg                                                                                                                                                                         >  1:79639‑M1/1‑204 (MQ=255)                          ataATCTCGCGCAACCTATTTTCCCCTCGAACACTTTTTAAGCCGTAGATAAACAGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCAGGGGCATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGCTGCCTTCTGACCAATGGAAAGGCATTTTTGCCGTAAGACGTGGCGGTCTGGTAACGGGTGCtacaggctgggcgagattcagccacagaatcgaccggatggtagagg                                                                                                                                                                         >  2:104617‑M1/1‑202 (MQ=255)                             aTCTCGCGCAACCTATTTTCCCCTCGAACCCTTTTTAAGCCGTAGATAAACAGGATGCGACACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGAACAGGGGGCtactggctgggcgcaattcagccgcaatatcgatcagctgggaggtgcggtg                                                                                                                                                                    >  1:203831‑M1/1‑199 (MQ=255)                                                ccccTCGAACACTTTTTAAGCCGTAGATAAACAGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCtactggctgggcgaacttcagccgcaatatcgagccgctggtagaggcgggctatcgggtgatcctgctg                                                                                                                                                  <  1:110567‑M1/250‑71 (MQ=255)                                                                       aagATAAACAGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCtactggctgggcgaacttcagccgcaatatcgatccgctggtagaggcgggctatcgggtgatcctgctggattgtccgggttggggcaagagc                                                                                                                          <  1:55249‑M1/250‑95 (MQ=255)                                                                        aGATAAACAGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCTGGTACACGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCGTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTTGCGGTCTGGTACCGGGTGCtactggctgggctaacttcagccgcaatatcgatccgctggtagaggcgggctatcgggtgagcctgctggattgtccggtttgtggcaagagc                                                                                                                          <  2:106866‑M1/250‑95 (MQ=255)                                                                                                      cGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCGTTACTGGCGCGTGAACTGGGTATTCGTCATGTCGATAACGTTTGTATTTCCAGCTACGATCACGACAACCAGCGCGAGCTTAAAGTGCTGAAACGCGCAGAAGGCGATGGCGAAGGCTTCATCg                                                                                           >  1:78439/1‑251 (MQ=255)                                                                                                                          gggACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAGTCCGTGGCGGTCTGGTACCGGGTTCtactggctgggcgaacttcagccgcaatatcgatccgctggtagaggcgggctatcgggtgatcctgctggattgtccgggttggttcaatagcgattcggtcgttaatagtgggtcgcgatcggatcttaatgcacgaatcc                                                                         <  2:152457‑M1/249‑144 (MQ=255)                                                                                                                                       gATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCtactggctgggcgaacttcagccgcaatatcgatccgctggtagaggcgggctatcgggtgatcctgctggattgtccgggttggggcaagagcgattcggtcgttaatagtggttcgcgatcggatcttaatgcacgaatcctgaaaagcgtggtgg                                                          <  2:152167‑M1/251‑159 (MQ=255)                                                                                                                                        agccatGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCtactggctgggcgaacttcagccgcaatatcgatccgctggtagaggcgggctatcgggtgatcctgctggattgtccgggttggggcaagagcgattcggtcgttaatagtggttcgcgatcggatcttaatgcacgaatcctgaaaagcgtggtgga                                                         <  1:37793‑M1/249‑160 (MQ=255)                                                                                                                                                            aaGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCCGGTACCGGGTGCtactggctgggcgaacttcagccgcaatatcgatccgctggtagaggcgggctatcgggtgatcctgctggattgtccgggttggggcaagagcgattcggtcgttaatagtggttcgcgatcggatcttaatgcacgaatcctgaaaagcgtggtggatcaactggatatcgccaaaa                                     <  1:22104‑M1/251‑180 (MQ=255)                                                                                                                                                                               gAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCtactggctgggcgaacttcagccgcaatatcgatccgctggtagaggcgggctatcgggtggtcctgctgggttgtccggggtggggccagagcgctttggtcgttaatagtgggtcgcgatcggatcttaatgcacgaatcctgaaaagcgtggtggatcaactggatatcgccaaaaaccaactgctgggccaatc                  >  1:212937‑M1/1‑53 (MQ=255)                                                                                                                                                                                     tGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCtactggctgggcgaacttcagccgcaatatcgatccgctggaaggggcgggctatcgggtgatcctgctggattgtccggggtgggggaagaggggttcgggcgttaatagtgggtcgcgatcggatcttaatgaacggatcctgaaaaacggggtgggtcaactgggtatcgccaaaatccacctgctgggcaactcgagggg            >  1:220656‑M1/1‑47 (MQ=255)                                                                                                                                                                                          aGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCtactggctgggcgaactgcagccgcaatatcgatccgctggtagaggcgggctatcgggtgatcctgctggattgtccgggttggggcaagagcgattcggtcgttaatagtggttcgcgatcggatcttaatgcacgaatcctgaaaatcgtggtggatcaactggatatcgccaaaatccacctgctgggcaactcgatggggggcc       <  1:149732‑M1/251‑210 (MQ=255)                                                                                                                                                                                            gctttagtGCCGTATGACGTGGCGGTCTGGTAACTGGTGCGGTACTTGCGCGTGAACTGGGTATTCGTCATGTCGATACCGTTTGTATTTCCAGCTACGATCACGACAACCAGCGCGAGCTTAAAGTGCTGAAACGCGCAGAAGGCGATGGCGAAGGCTTCATCGTTATTGATGACCTGGTGGATACCGGTGGTACTGCGGTTGCGAGTCGTGAAATGTATCCAAAAGCGCACTTTGTCACCATCTTCGCa     <  2:78439/244‑1 (MQ=255)                                                                                                                                                                                                tattGCCTTAAGCCGGGGGGGGCTGGTACCGGGGGCtacggggtgggcgaacttcagccgcaatatcgttccgctggtagaggcggggtatcgggtgatcctgctggattgtccgggttgggtcaagagcgattcggtcgttaatagtggttcgcgatcggatcttaatgcacgaatcctgaaaagcgtggtggatcaactggatatcgccaaaatccacctgctgggcaactcgatggggggccatagt  <  2:212552‑M1/250‑215 (MQ=255)                                                                                                                                                                                                                                   |                                                                                                                                                                                                                       CTGGTTTTTAGTGCGCCAGATCTCTATAATCTCGCGCAACCTATTTTCCCCTCGAACACTTTTTAAGCCGTAGATAAACAGGCTGGGACACTTCACATGAGCGAAAAATACATCGTCACCTGGGACATGTTGCAGATCCATGCACGTAAACTCGCAAGCCGACTGATGCCTTCTGAACAATGGAAAGGCATTATTGCCGTAAGCCGTGGCGGTCTGGTACCGGGTGCGTTACTGGCGCGTGAACTGGGTATTCGTCATGTCGATACCGTTTGTATTTCCAGCTACGATCACGACAACCAGCGCGAGCTTAAAGTGCTGAAACGCGCAGAAGGCGATGGCGAAGGCTTCATCGTTATTGATGACCTGGTGGATACCGGTGGTACTGCGGTTGCGATTCGTGAAATGTATCCAAAAGCGCACTTTGTCACCATCTTCGCAAAA  >  NC_000913/255881‑256321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.