| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,193,996 | T→G | D70A (GAT→GCT) | thiE ← | thiamine phosphate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,193,996 | 0 | T | G | 98.0% | 151.0 / ‑4.4 | 49 | D70A (GAT→GCT) | thiE | thiamine phosphate synthase |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base G (23/25); total (24/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.90e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.12e-01 | |||||||||||
CCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCCCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCCACCTCTTCATCGCGCCGATCTTTGATGCGTAGCTGGAGAGTACGTACGCCTGCATCCAACAG‑ACGTTCGATCCACTGTACGCTGTCCACCACCGGGTACAGTCCTGAACGAAAAGGTACAGGAGGAAAATCAGGCTGATACATCACGCTTCCTCCTTACGCAGGTAGATTTCTCCG > NC_000913/4193752‑4194237 | ccGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCCCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTg > 1:124761/1‑250 (MQ=255) cGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCCCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGAt > 1:244232/1‑251 (MQ=255) tGCCAGCTGTTCCAGCCCCTGAGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGACCACCTGTCCCAGCGCGATATCAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCCGGCCTGCCGCGCGGATGGCATTGAGATCGGGGGCTTGCAAATATTCCTGCCCCAAATGGACGCCATCAGCCTGATGCTTGATCGCCAGCCGCCACTAAGCGTTgtta > 2:21252/1‑247 (MQ=255) gCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCCCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTTCAAATCTTCCTTCCCCAAAGGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATaa < 1:313941/250‑1 (MQ=255) cccAGCTGTCCCGCCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTGGCGTCGGAAACCCATGCCCCAGCGCTATATAGGAGGGGCGTGCGGCCAGCGCGACGTCGATTTCAATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTCCCTGCCCCAAATGGACGCGATACGCCTGATGTTTGATCGCCAGCCGCCAGTAAGCGTTGATaaa < 2:329296/250‑1 (MQ=255) ccAGCTGTCCCAGCCCCTGCGGTGCAGAAGGCATCGGTTTGGTTTGCGTCGGGAACACATGTCCCAGCGCGATATAAGAGGGTCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAAc < 1:104141/251‑1 (MQ=255) gCTGTTCCAGCCCCTGCGGTGCAGAAGGCATTTGTTTGGTTTGCGTCGGGAACACATGTCCCAGCGGGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCAGGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTGGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAAt < 1:200080/251‑1 (MQ=255) tCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCCCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTACGCGTTGATAAACAATagcgc > 1:227576/1‑251 (MQ=255) tCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCCCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATcgcg < 1:317436/250‑1 (MQ=255) aGCCCCTGGGGTGCAGAAGGCATCTGTTTGGTTTGCGGCGTGAACACATGTCCCAGCGCTATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATACCGTCATGTGTCGAAACGCCCAGCCGAAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGtt < 1:13406/251‑1 (MQ=255) gCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCCCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGtt > 1:300851/1‑250 (MQ=255) gCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCCCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGcc < 1:200050/251‑1 (MQ=255) aGAAGGCTGCTGTTTGGTTTGCGTCGGGAACAAATGTCCCAGCGCGATATAAGAGGGGTGTGCTGCGAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAAAGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGTTCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGGTATAGCGGCGGCCCa < 1:260318/251‑1 (MQ=255) aGGCGTCTGTTGGGTTTGGGTCGGGAACACATGTTCCAGCGCGATATAAGAGGGGCGTTGTGCCAGGGCGACGTTGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGTCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAACCTCCTTGCCCCAAATGGACTCAATACGCCGGATGCTTGAGCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAgcg < 2:350332/251‑1 (MQ=255) gCATCTTTTTGGTTTGCGCGGGGAACCCTGGCCCCAGCGCGATATAAGAGGGGCGTGCTGCCAGGGCGCCGGCGATTTCCATACCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCa < 2:118428/251‑1 (MQ=255) aTCTGTTTGGTTTGCGTCGGGAACACATGTCCCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAAt > 1:278779/1‑251 (MQ=255) gtttggtttgCGTCGGGAACACATGTCCCAGCGCGATATAAGAGGGGCGTGCTGCCGGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCCATTgcc > 2:146621/1‑251 (MQ=255) gAACACATGTCCCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGCCATCGGcct > 2:157946/1‑249 (MQ=255) tGTCCCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGCTGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATCCGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCCATTGCCGCCCCCACCTCGGCTTCCACctc > 2:23884/1‑251 (MQ=255) cgcgATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCCACCTCTTCATcgc > 1:100342/1‑251 (MQ=255) gATAAAAGGGGGGCGGGCGGCCAGCGCGAGGCCGATTTCCAGAGCGTCATGGGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAAGGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCCACCTCTTCATCGCGcc < 2:100342/251‑1 (MQ=255) atatAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCCACCTCTTCATCGCGCCg > 1:285614/1‑251 (MQ=255) gcgcgcCGTCGATTTCCATATCGTCATTTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGAGCGGGGGCTTGCAAATCTTCCTGCCCCAAAGGGACGCCATACGCCTGATGCTTGAGCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCGACGACATCGGCTTCCACCTCTTCATCGCGCCGATCTTTGATGCGTAGCTGgaga < 1:336261/251‑1 (MQ=255) cGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCCACCTCTTCATCGCGCCGATCTTTGATGCGTAGCTGGAGCgtacgt > 1:333034/1‑251 (MQ=255) aTGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCCACCTCTTCATCGCGCCGATCTTTGATGCGTAGCt > 1:293156/1‑221 (MQ=255) gtgtCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGACAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCCACCTCTTCATCGCGCCGATCATTGATGCGTAGCTTGAGAGTACGTACGCATGCATCCAACAG‑ACGt > 1:161032/1‑251 (MQ=255) caacacccccAGCCGCGGTCCTCCCTCGGGGATGCAATTGAGATCGGTGTCTTGAAAATCTCCCGGCCCCAAAGGTCCGCCTTACGCCTGAGGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCCACCTCTTCATCGCGCCGATCTTTGATGCGTAGCTGGAGAGTACGTACGCCTGCATCCAACAG‑ACGTTCGa < 2:275399/244‑1 (MQ=255) ccGCCCAGCCGCAGGCCGGCCGGGCGGATGGTATTGAGCCTGGTGGATTGAAAACCTCCCGGCCCCAAATGGACGCCATACGCGTGATGCTTGACCGCCAGCCGCTAGTAAGCGTTGATAAAAAATCGCGCGTTTGAGCGGCGGCCCAGCGCAAGTGCCGCCAAGACATCGGCTTCCACCTCTTCATCGCGCCGATCTTTGATGCGTAGCTGGGGAGTACGTATGCCTGCATCCAACAG‑ACGTTCGATCCa < 1:302017/250‑1 (MQ=255) ccccAGCCGCAGGCCGGCCGGGCGGATGGCATTGAGATCGGTGGTTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATTCTTGAGCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCCACCTCTTCATCGCGCCGATCTTTGAGGCGTAGCTGGAGAGTACGTACGCCTGCATCCAACAG‑ACGTTCGATCCACt < 1:312780/250‑1 (MQ=255) cAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCCCGACATCGGCTGCCACCCCTTCATCGCGCCGAACTTTGAAGCGTCGCTGGAGAGTGCGGACACCTGCAGCCCACAGTAC‑TTCGATccccttgaccattg > 2:305662/1‑239 (MQ=255) aTGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCCACCTCTTCATCGCGCCGATCTTTGATGCGTAGCTGGAGAGTACGTACGCCTGCATCCAACAG‑ACGTTCGATCCACTGTACGCTGTCCACCACCGGGTAc > 1:254170/1‑249 (MQ=255) ggCATTGAGATCGGTGGCTTGCAAACCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCCACCTCTTCATCGCGCCGATCTTTGATGCGTAGCTGGAGAGTACGTACGCCTGCATCCAACAG‑ACGTTCGATCCACTGTACGCTGTCCACCACCGGGTACAGTc < 1:181461/251‑1 (MQ=255) gagaTCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCCACCTCTTCATCGCGCCGATCTTTGATGCGTAGCTGGAGAGTACGTACGCCTGCATCCAACAG‑ACGTTCGATCCACTGTACGCTGTCCACCACCGGGTACAGTCCt > 1:6086/1‑247 (MQ=255) cGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCACTTGCCGCCACGACATCGGCTTCCACCTCTTCATCGCGCCGGTCTTTGATGCGTAGCTGGAGAGAACGTACGCCTGCATCCAACAG‑ACGTTCGCACCCCTGTACGCTGTCCACACCCGGGTAAAGTCCTGAACGaaa > 2:286570/1‑250 (MQ=255) tGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCCACCTCTTCATCGCGCCGATCTTTGATGCGTAGCTGGAGAGTACGTACGCCTGCATCCAACAG‑ACGTTCGATCCACTGTACGCTGTCCAACACCGGGTACAGTCCTGCACGAAAAGGTACagg > 1:243883/1‑251 (MQ=255) aaaTCTTCCGGCCCAAAAGGGACGCAATCCCCCGGATGCTTGACCCCCACCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCCACCTCTTCATCGCGCCGATCTTTGATGCGTAGCTGGAGAGTACGTACGCCTGCATCCAACAG‑ACGTTCGATCCACTGTACGCTGTCCACCACCGGGTACAGTCCTGAACGAAAAGGTACaggagg < 2:229638/251‑1 (MQ=255) tctCCTGCCCCAAATGGACGCCATCCGCCTGAGCCTTGACCGCCAGCCGCCAGTAAGCGTTGATAAACAAGCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCCACCTCTTCATCGCGCCGATCTTTGATGCGTAGCTGGAGAGTACGTACGCCTGCATCCAACAG‑ACGTTCGATCCACTGTACGCTGTCCACCACCGGGTACAGTCCTGAACGAAAAGGTACAGGAGGaaa < 2:330867/248‑1 (MQ=255) ttCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACCTCGGCTTCCACCTCTTCATCGCGCCGATCTTTGATGCGTAGCTGGAGAGTACGTACGCCTGCATCCAACAG‑ACGTTCGATCCACTGTACGCTGTCCACCCCCGGGTACAGTCCTGAACGAAAAGGTACAGGAGGaaaa > 2:90034/1‑250 (MQ=255) cccccccccAAAGGGACCCCTAACGCCTGGTGCTGAACCGCCACCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCCACCTCTTCATCGCGCCGATCGTTGATGCGTAGCTGGAGAGTACGTACGCCTGCATCCAACAG‑ACGTGCGATCCACTGTACGCTGTCCACCACCGGGTACAGTCCTGAACGAAAAGGTACAGGAGGAAAATc < 2:30568/246‑1 (MQ=255) aaaTGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCCACCTCTTCATCGCGCCGATCTTTGATGCGTAGCTGGAGAGTACGTACGCCTGCATCCAACAG‑ACGTTCGATCCACTGTACGCTGTCCACCACCGGGTACAGTCCTGAACGAAAAGGTACAGGAGGAAAATCAGGCTGATa < 1:23884/251‑1 (MQ=255) ggACGCCATCCCCCTGATGCTTGATCGCCAGCCGCAAGTAAGCGTTGATAAACAACCGCGCTTTATAGCGGCGGCCCAGCGCAATTCCCGCCACGACATCGGCTTCCACCTCTTCATCGCGCCGATCTTTGATGCGTAGCTGGAGAGTACGTACGCCTGCATCCAACAG‑ACGTTCGATCCACTGTACGCTGTCCACCACCGGGTACAGTCCTGAACGAAAAGGTACAGGAGGAAAATCAGGCTGATACATc < 1:177014/251‑1 (MQ=255) atccGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCCACCTCTTCATCGCGCCGATCTTTGATGCGTAGCTGGAGAGTACGTTCGCCTGCATCCAACAG‑ACGTTCGATCCACTGTACGCTGTCCACCACCGGGTACAGTCCTGAACGAAAAGGTACAGGAGGAAAATCa < 1:327183/229‑1 (MQ=255) aTACGCCTGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGCCATCGGCTTCCACATCTTCATCGCGCCGATCTTTGATGCGTAGCTGGAGAGTACGTACGCCTGCATCCAACAG‑ACGTTCGATCCACTGTACGCTGTCCACCACCGGGTACAGTCCTGAACGAAAAGGTACAGGAGGAAAATCa > 2:327183/1‑232 (MQ=255) cccctgtggCTTGATCGCCAGCCGCCAGGAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCCACCTCTTCATCGCGCCGATCTTTGATGCGTAGCTGGAGAGTACGTACGCCTGCATCCAACAG‑ACGTTCGATCCACTGTACGCTGTCCACCACCGGGTACAGTCCTGAACGAAAAGGTACAGGAGGAAAATCAGGCTGATACATCACGCTtcctc < 2:254170/243‑1 (MQ=255) tGATGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCCACCTCTTCATCGCGCCGATCTTTGATGCGTAGCTGGAGAGTACGTACGCCTGCATCCAACAG‑ACGTTCGATCCACTGTACGCTGTCCACCACCGGGTACAGTCCTGAACGAAAAGGTACAGGAGGAAAATCAGGCTGATACATCCCGCTTCCTCCtt > 2:298993/1‑250 (MQ=255) taTGCTTGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTAAAGCTGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCCACCTCTTCATCGCGCCGATCTTTGATGCGTAGCTGGAGAGTACGTACGCCTGCATCCAACAG‑ACGTTCGATCCACTGTACGCTGTCCACCACCGGGTACAGTCCTGAACGAAAAGGTACAGGAGGAAAATCAGGCTGATACATCACGCTTCCTCCTTa < 1:34441/249‑1 (MQ=255) tGATCGCCAGCCGCCAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCCACCTCTTCATCGCGCCGATCTTTGATGCGTAGCTGGAGAGTACGTACGCCTGCATCCAACAG‑ACGTTCGATCCACTGTACGCTGTCCACCACCGGGTACAGTCCTGCACGAAAAGGTACAGGAGGAAAATCAGGCTGATACATCACGCTTCCTCCTTACGCAGGt > 1:72154/1‑251 (MQ=255) aTCGCCAGCCGCCAGTAAGCGTTGATAAACAACCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCCACCTCTTCATCGCGCCGATCTGTGATGCGTAGCTGGAGAGTACGTACGCGTGCATCCAACAG‑ACGTTCGATCCACGGGACGCTGTCCACCACCGGGTACAGTCCTGAACGAAAAGGTACAGGAGGAAAATCAGGCTGATACATCACGCTTCCTCCTTACGCAGGTAg < 1:51709/251‑1 (MQ=255) cgccAGTAAGCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCCACCTCTTCATCGCGCCGATCTTTGATGCGTAGCTGGAGAGTACGTACGCCTGCATCCCACAG‑ACGTTCGATCCACTGTACGCTGTCCACCACCGGGTACAGTCCTGAACGAAAAGGTACAGGAGGAAAATCAGGCTGATACATCACGCTTCCTCCTTACGCAGGTAGATTTCTCCg > 1:169713/1‑251 (MQ=255) | CCGTGCCAGCTGTTCCAGCCCCTGCGGTGCAGAAGGCATCTGTTTGGTTTGCGTCGGGAACACATGTCCCAGCGCGATATAAGAGGGGCGTGCTGCCAGCGCGACGTCGATTTCCATATCGTCATGTGTCGAAACGCCCAGCCGCAGGCCTGCCGCGCGGATGGCATTGAGATCGGTGGCTTGCAAATCTTCCTGCCCCAAATGGACGCCATACGCCTGATGCTTGATCGCCAGCCGCCAGTAATCGTTGATAAACAATCGCGCGTTATAGCGGCGGCCCAGCGCAATTGCCGCCACGACATCGGCTTCCACCTCTTCATCGCGCCGATCTTTGATGCGTAGCTGGAGAGTACGTACGCCTGCATCCAACAG‑ACGTTCGATCCACTGTACGCTGTCCACCACCGGGTACAGTCCTGAACGAAAAGGTACAGGAGGAAAATCAGGCTGATACATCACGCTTCCTCCTTACGCAGGTAGATTTCTCCG > NC_000913/4193752‑4194237 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |