| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,934,804 | A→G | intergenic (‑200/+35) | edd ← / ← zwf | phosphogluconate dehydratase/NADP(+)‑dependent glucose‑6‑phosphate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,934,804 | 0 | A | G | 96.0% | 72.6 / ‑4.7 | 25 | intergenic (‑200/+35) | edd/zwf | phosphogluconate dehydratase/NADP(+)‑dependent glucose‑6‑phosphate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (0/1); new base G (10/14); total (10/15) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.20e-01 | |||||||||||
CGAACGTTCAATGATTCGATTTGTTACGCGTAACAATTGTGGATTCATAAAGGCTCCTGAAATTGAGTTGTCAGAGCAGGATGATTCACAACGCGTTTCATTCAGAGGATTTATGACTGAAACG‑CCTGTAACCGGAGCTCATAGGGCAAAAACGTTTCAGTCAGTGTAATAAAAAAAGCCTCGTGGGTGAATCCGCACGAGGCCTGAAAGTGTAAAAATTGTTCTACAATCTGCGCAAGATCATGTTACCGGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTCCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCATTGTCCATCGCCCACGCCTCAGTAATGGAGTCTACCCATTTCCAGGCTTCTTCCACTTCGTCGCGACGTACAAACAGTGCCTGAATACCACGCATGGTTTCCAGCAGCAAA > NC_000913/1934557‑1935046 | cgAACGTTCAATGATTCGATTTGTTACGCGTAACAATTGTGGATTCATAAAGGCTCCTGAAATTGAGTTGTCAGAGCAGGATGATTCACAACGCGTTTCATTCAGAGGATTTATGACTGAAACG‑CCTGTAACCGGAGCTCATAGGGCAAAAACGTTTCAGTCAGTGTAATAAAAAAAGCCTCGTGGGTGAATCCGCACGAGGCCTGAAAGTGTAAAAATTGTTCTACAATCTGCGCAAGATCATGTTGCCg > 1:312835/1‑251 (MQ=255) ttCAATGATTCGATTTGTTACGCGTAACAATTGTGGATTCATAAAGGCTCCTGAAATTGAGTTGTCAGAGCAGGATGATTCACAACGCGTTTCATTCAGAGGATTTATGACTGAAACG‑CCTGTAACCGGAGCTCATAGGGCAAAAACGTTTCAGTCAGTGTAATAAAAAAAGCCTCGTGGGTGAATCCGCACGAGGCCTGAAAGTGTAAAAATTGTTCTACAATCTGCGCAAGATCATGTTGCCGGTaaa > 1:328758/1‑250 (MQ=255) tCAATGATTCGATTTGTTACGCGTAACAATTGTGGATTCATAAAGGCTCCTGAAATTGAGTTGTCAGAGCAGGATGATTCACAACGCGTTTCATTCAGAGGATTTATGACTGAAACG‑CCTGTAACCGGAGCTCATAGGGCAAAAACGTTTCAGTCAGTGTAATAAAAAAAGCCTCGTGGGTGAATCCGCACGAGGCCTGAAAGTGTAAAAATTGTTCTACAATCTGCGCAAGATCATGTTGCCGGTaaaa > 2:276007/1‑250 (MQ=255) gATTAGATTGGTTACGCGTAACAATTGGGGATTCATAAAGGCTCCTGAAATTGAGTTGTCAGATCAGGATGATTCACAACGCGTTTCATTCAGAGGATTTATGACTGAAACG‑CCTGTAACCGGAGCTCATAGGGCAAAAACGTTTCAGTCAGTGTAATAAAAAAAGCCTCGTGGGTGAATCCGCACGAGGTCTGAAAGTGTAAAAATTGTTCTACAATCTGCGCAAGATCATGGTGCCGGTAAAATAAcc < 1:73528/250‑1 (MQ=255) gtttGGTACGCGTAACAATTGTGAATTCATAAAGGCTCCTGAAATTGAGGTGTCAGAGCAGGATGAGTCACAACGCGTTTCATTCAGAGGATATATGACTGAAACG‑CCTGTAACCGGAGCTCATAGGGCTAAAACGTTTCAGTCAGTGTAATAAAAAAAGCCGCGTGGGTGAATCCGCACGAGGCCTGAAAGTGTAAAAAATGTTCTACAATCGGCGCAAGATCATGGTGCTGGTAAAATAACCATAAAgg < 2:1989/250‑1 (MQ=255) gTTACGCGTAACAATTGTGGATTCATAAAGGCTCCTGAAATTGAGTTGTCAGAGCAGGATGATTCACAACGCGTTTCATTCAGAGGATTTATGACTGAAACG‑CCTGTAACCGGAGCTCATAGGGCAAAAACGTTTCAGTCAGTGTAATAAAAAAAGCCTCGTGGGTGAATCCGCACGAGGCCTGAAAGTGTAAAAATTGTTCTACAATCTGCGCAAGATCATGTTGCCGGTAAAATAACCATAAAGGATa > 1:44233/1‑250 (MQ=255) tACGCGTAACAATTGTGGATTCATAAAGGCTCCTGAAATTGAGTTGTCAGAGCAGGATGATTCACAACGCGTTTCATTCAGAGGATTTATGACTGAAACG‑CCTGTAACCGGAGCTCATAGGGCAAAAACGTTTCAGTCAGTGTAATAAAAAAAGCCTCGTGGGTGAATCCGCACGAGGCCTGAAAGTGTAAAAATTGTTCTACAATCTGCGCAAGATCATGTTGCCGGTAAAATAACCATAAAGGATAAg < 1:18661/250‑1 (MQ=255) aGTTGTCAGAGCAGGATGATTCACAACGCGTTTCATTCAGAGGATTTATGACTGAAACG‑CCTGTAACCGGAGCTCATAGGGCAAAAACGTTTCAGTCAGTGTAATAAAAAAAGCCTCGTGGGTGAATCCGCACGAGGTCTGAAAGTGTAAAAATTGTTCTACAATCTGCGCAAGATCATGTTGCCGGTAAAATAACCATAAAGGATAAGCGCAGATAtt > 1:195985/1‑219 (MQ=255) aGTTGTCAGAGCAGGATGATTCACAACGCGTTTCATTCAGAGGATTTATGACTGAAACG‑CCTGTAACCGGAGCTCATAGGGCAAAAACGTTTCAGTCAGGGTAATAAAAAAAGCCTCGTGGGTGAATCCGCACGAGGTCTGAAAGTGTAAAAATTGTTCTACAATCTGCGCAAGATCATGTTGCCGGTAAAATAACCATAAAGGATAAGCGCAGATAtt < 2:195985/219‑1 (MQ=255) atTCACAACGCGTGTCATTCAGATGAATGATGACTGAAACG‑CCTGTAACCGGAGCTCATAGGGCAAAAACGTTTCAGGCAGTGTAATAAAAAAAGCCTCGTGGGTGAATCCGCACGAGGCCTGAAAGTGTAAAAATTGTTCTACAATCTGCGTAAGATCATGTTGCCGGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACCCAGTCCAGGAACTACCATCACGGGTAATCATCGCCACCGAg < 2:312835/251‑1 (MQ=255) catgaagagGATTTATGACTGAAACGGCCT‑TAACCGGAGTACAGAGGGCAAAAACTGTTCAGGCAGTGTAATAAAAAAAGCCGCGTGGGTGAATCCGCACGAGGTATGAAAGTGTAAAAATTGTTCTACAATCTGCGCAAGATCAGGTTGACGGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCAGGCCAGGAACTACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTCCCCa < 2:101104/245‑1 (MQ=255) ttcaGAGGATTTATGACTGAAACG‑CCTGTAACCGGAGCTCATAGGGCAAAAACGTTTCAGTAAGTGTAATAAAAAAAGCCTCGTGGGTGAATCCGCACGAGGCCTGAAAGTGTAAAAATTGTTCTACAATCTGCGCAAGATCATGTTGCCGGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCATTCAAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTCCCCAGGt > 1:243151/1‑251 (MQ=255) ttATGACTTAAACC‑CCTGTAACCGGAGCTCATTGGGCAAAAACGTTTCAGTCAGTGTAATAAAAAAAGCCTCGTGGGGGAATCCGCACGAGGCCTGAAAGTGTAAAAATTGTTCTACAATCTGCGCAAGATCATGTTGCCGGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTCCCCAGGTTCCGTCCtt < 2:195462/250‑2 (MQ=255) cTGAAACG‑CCTGTAACCGGAGCTCATAGGGCAAAAACGTTTCAGTCAGTGTAATAAAAAAAGCCTCGTGGGTGAATCCGCACGAGGCCTGAAAGTGTAAAAATTGTTCTACAATCTGCGCAAGATCATGTTGCCGGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTCCCCAGGTTCCGGCCTGATACGGt > 2:173249/1‑251 (MQ=255) cATAGGGCAAAAACGTTTCAGTCAGTGTAATAAAAAAAGCCTCGTGGGTGAATCCGCACGAGGCCTGAAAGTGTAAAAATTGTTCTACAATCTGCGCAAGATCATGTTGCCGGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTCCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCATTGTCCATc < 1:287313/249‑1 (MQ=255) aGGGCAAAAACGTTTCAGTCAGTGTAATAAAAAAAGCCTCGTGGGTGAATCCGCACGAGGCCTGAAAGTGTAAAAATTGTTCTACAATCTGCGCAAGATCATGTTGCCGGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTCCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCATTGTCCATCGcccc > 2:211858/1‑250 (MQ=255) aaaCGTTTCAGTCAGTGTAATAAAAAAAGCCTCGTGGGTGAATCCGCACGAGGCCTGAAAGTGTAAAAATTGTTCTACAATCTGCGCAAGATCATGTTGCCGGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTCCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCATTGTCCATCGCCCACGCCTCa < 1:173249/251‑1 (MQ=255) aaCGTTTCAGTCAGGGTAATAAAAAAAGCCGCGTGGGTGAATCCGCACGAGGCCGGAAAGGGTAAAAATTGTTCTACAATCTGCGCAAGATCATGTTGCCGGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACGCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTCCCCAGGTGCCGGCCTGATACGGTTGCGGCGCATCATTGTCCATCGCCCACGCCTCAg < 2:243151/251‑1 (MQ=255) tgtAATAAAAAAAGCCTCGTGGGCGAATCCGCACGAGGCCTGAAAGTGTAAAAATTGTTCTACAATCTGCGCAAGATCATGTTGCCGGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTCCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCATTGTCCATCGCCCACGCCTCAGTAATGGAGTCTAcc > 2:199664/1‑251 (MQ=255) ggCCTGAAAGTGGAAAAATTGTTCGACAATCTGCGCAAGATCAGGTTGCCGGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTCCCCAGGTGCCGGCCTGATACGGTTTCGGCGCATCATTGTCCAGCGCCCACGCCTCAGTAATGGAGTCTACCCATTTCCAGGCTTCTTCCACTTCGTCGCGACGTACa < 2:171939/251‑1 (MQ=255) ccTGAAAGTGTAAAAATTGTTCTACAATCTGCGCAAGATCATGTTGCCGGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTCCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCATTGTCCATCGCCCACGCCTCAGTAATGGAGTCTACCCATTTCCAGGCTTCTTCCACTTCGTCGCGACGTACaaa < 1:276007/251‑1 (MQ=255) tGAAAGTGTAAAAATTGTTCTACAATCTGCGCAAGATCATGTTGCCGGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTCCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCATTGTCCATCGCCCACGCCTCAGTAATGGAGTCTACCCATTTCCAGGCTTCTTCCACTTCGTCGCGACGTaaatc > 1:350077/1‑245 (MQ=255) aCAATCTGCGCAATATCATGTTGCCGGTAAAATAACCATACAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTCCCCAGGTTCCGGCCTGATACGTTTTCTGCGCATCATTGTCCATCGCCCACGCCTCAGTAATGGAGTCTACCCTTTTCCAGGCTTCCTCCACTTCGTCGCGACGTACAAACAGTGCCTGAATACCACGCAt < 2:178505/249‑1 (MQ=255) gcgcAAGATCATTGTGCCGGTAAAATAACCATAAAGGACAAGCGCAGATATTACTCAAACCCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCACCGGGTCCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCATTGTCCATCGCCCACGCCTCAGTAATGGAGTCTACCCATTTCCAGGCTTCTTCCACTTCGTCGCGACGTACAAACAGTGCCTGAATACCACGCATGGTTTCcag < 2:56805/251‑1 (MQ=255) attaTGTTACCGGTAAAATAACCATAAAGGATAAGCGCAGATATTCCTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTCCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCATTGTCCATCGCCCACGCCTCAGTAATGGAGTCTACCCATTTCCAGGCTTCTTCCACTTCGTCGCGACGTACAAACAGTGCCTGAATACCACGCATGGTTTCCAGCAGCaaa < 2:131360/248‑1 (MQ=255) | CGAACGTTCAATGATTCGATTTGTTACGCGTAACAATTGTGGATTCATAAAGGCTCCTGAAATTGAGTTGTCAGAGCAGGATGATTCACAACGCGTTTCATTCAGAGGATTTATGACTGAAACG‑CCTGTAACCGGAGCTCATAGGGCAAAAACGTTTCAGTCAGTGTAATAAAAAAAGCCTCGTGGGTGAATCCGCACGAGGCCTGAAAGTGTAAAAATTGTTCTACAATCTGCGCAAGATCATGTTACCGGTAAAATAACCATAAAGGATAAGCGCAGATATTACTCAAACTCATTCCAGGAACGACCATCACGGGTAATCATCGCCACCGAGGCAACGGGTCCCCAGGTTCCGGCCTGATACGGTTTCGGCGCATCATTGTCCATCGCCCACGCCTCAGTAATGGAGTCTACCCATTTCCAGGCTTCTTCCACTTCGTCGCGACGTACAAACAGTGCCTGAATACCACGCATGGTTTCCAGCAGCAAA > NC_000913/1934557‑1935046 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |