Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	788,785	IS1 (+) +9 bp	coding (45‑53/1041 nt)	galM ←	galactose‑1‑epimerase

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	257908 =	NA (NA)	38 (1.210)	34/480	0.1	94.8%	noncoding (768/768 nt)	IS1	repeat region
	?	NC_000913	788785 =	2 (0.070)					coding (53/1041 nt)	galM	galactose‑1‑epimerase
*	?	NC_000913	= 258675	NA (NA)	40 (1.270)	39/480	0.0	95.1%	noncoding (1/768 nt)	IS1	repeat region
	?	NC_000913	= 788793	2 (0.070)					coding (45/1041 nt)	galM	galactose‑1‑epimerase

GACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTG‑AGGCAGCACCTGGCAC‑GGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/258130‑257908 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCTTGCTGTACGGCAGGCACCAGCTCTTCCGGGATCAGCGCGACGATACAGCCGCCAAATCCGCCGCCGGTCATGCGTACGCCACCTTTGTCGCCAATCACAGCTTTGACGAT  >  NC_000913/788785‑789028                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       aacgcgtgtggtGCCGCTGTATGCAACCCTCCTGAAGTGAAAGATGCACGTAACAAGCAAGCGATATACGCAGCGAATTGAGCTGCATAACCTGAATCTG‑AGGCAGCACCGGGCAC‑GGCTGGGACGGAAGGCGCGGTCGGTCACAAAATCGGTGGAGCTGCATGACAAAGTTATCGGGCTTTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAACAGTCGGTACGGCTGACCATCGGGT                                                                                                                                                                                                                           <  2:192725/238‑1      ATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTG‑TGGCAGCACCTGGCAC‑GGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAACAGTCGGTACGGCTGACCATCGGGTGCCAGg                                                                                                                                                                                                                     >  1:140390/1‑250                GCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTG‑AGGCAGCACCTGGCAC‑GGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTT                                                                                                                                                                                                           >  1:194480/1‑251                              GCCTGAAGGGAAAGCTGCACGTAATCAGCCAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTG‑AGGCAGCACCTGGCAC‑GGCTGGGACAGAAGTCGCTGTCGTTATCACAATCGGAGGAGCTGCATGACAAAGGCATCGGGGATTATCTTAACATAAAACACTATCAATAAGTTGGAGTCATTACCAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTC                                                                                                                                                                                             >  1:16483/1‑251                                                ACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTG‑AGGCAGCACCTGGCAC‑GGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTT                                                                                                                                                                           >  2:287879/1‑251                                                   TAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTG‑AGGCAGCACCTGGCAC‑GGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTAC                                                                                                                                                                        >  1:347820/1‑251                                                       CAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTG‑AGGCAGCACCTGGCAC‑GGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAAC                                                                                                                                                                    <  1:241434/251‑1                                                          CAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTG‑AGGCAGCACCTGGCAC‑GGCTGGGACGGAAGTCGCTGTCGTTCTCAATATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGT                                                                                                                                                                  >  1:253752/1‑250                                                           cacctgcgcgggaAGCGAATTGAGCGGCATAACCTGAAT‑TGTAGGCAGCACCTGG‑ACAGGCAGGGACGGAAGTCTCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGATCATAAAACATTATCAATAAGTTTGAGTCATTACCAACAGTCGGTACTGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTTTCCTGCTCCTTGTGATGGTTTACAAACGTAA                                                                                                                                                                <  1:187749/238‑1                                                                  ATACGCAGCGAATTGAGCGGCATACCCTGAATCTG‑CGGCAGCACCTGGCAC‑GGATGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGAATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATACGGTGGAGTCTTTACCAAAAGTCGGTACGGCTGACCATCGGGGGCCAGTGAGGGAGTTTCGTTCAGACCTGTCTTGCTCCTTGTGCTGGTTTACAAACGTAAAAAGTCT                                                                                                                                                         >  2:179377/1‑251                                                                     CGCAGCGAATTGAGCGGCATAACCTGAATCTG‑AGGCAGCACCTGGCAC‑GGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTG                                                                                                                                                                                 <  1:269759/224‑1                                                                     CGCAGCGAATTGAGCGGCATAACCTGAATCTG‑AGGCAGCACCTGGCAC‑GGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTG                                                                                                                                                                                 >  2:269759/1‑224                                                                       CAGCGAATTGAGCGGCATAACCTGAATCTG‑AGGCAGCACCTGGCAC‑GGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGCGTCATTACCACCAGTCGGTACGGCTGCCCATCGGGTGCCAGTGCGGGCGTTTCGTTCAGCCCTGCCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGACTCTTT                                                                                                                                                     >  2:209110/1‑250                                                                           GAATTGAGCGGCATAACCTGAATCTG‑AGGCAGCACCTGGCAC‑GGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGAGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATAC                                                                                                                                                >  1:324144/1‑251                                                                                GAGCGGCATAACCTGAATCTG‑AGGCAGCACCTGGCAC‑GGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTGCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGT                                                                                                                                            <  1:246723/250‑1                                                                                  GCGGCATAACCTGAATCTG‑AGGCAGCACCTGGCAC‑GGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTT                                                                                                                                         <  1:155531/251‑1                                                                                    GGCATAACCAGAATCTG‑CGGCAGCACCTGGCCC‑GGCTGGGACGGAAGTCGCTGACGTACTCACAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGATGGAGTCATTACCAACAGTCGGTACGGCTGACCATCGGCGGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACACACGTAAAACGGCTCTTTAATACCTGGTTTTt                                                                                                                                       >  2:223438/1‑250                                                                                           CCTGAATCTG‑AGGCAGCACCTGGCAC‑GGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATA                                                                                                                                <  2:132786/251‑1                                                                                             TGAATCTG‑AGGCAGCACCTGGCAC‑GGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGACATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATT                                                                                                                              >  1:223993/1‑251                                                                                              ggATCTG‑AGGCAGCACCTGGCAC‑GGCTGGGACTGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAACAGTCGGTCCGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCGCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTG                                                                                                                             <  2:74004/249‑1                                                                                                    G‑AGGCAGCTCCTGGCAC‑GGCTGGGACGGAAGTCTCGGTCGGTCTCAAAATCGGTGGAGCTTCATGACCAAGTCATCGTGCATTATCTGAACATAAAACACTAACAATAAGTTGGAGTCATTACCAACAGTCGGTACGGCTGACCATCGGGTGCCAGGGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCGTGTGAGGGTTTACAACCGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGC                                                                                                                       <  2:275647/251‑1                                                                                                    G‑AGGCAGCACCTGGCAC‑GGCTTGGCCGGAAGCCGCTGTCGTTATCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTAGCTGAACATAAAACACTATCAACAAGTGGGAGTCATTACCAACAGTCGGTACGGCTGACTATCGGGTGCCAGTGCGGGAGTTTCGTTCTGCACTGTCCTGATCCTTGTGATGGTTTACAAACGTAAAAAGTCGCTTTAATACCTGTTTTTGCTTCATATTGTTCAGC                                                                                                                       <  2:275645/251‑1                                                                                                    G‑AGGCAGCACCTGGCAA‑GGCTGGGACGGAATTCGCTGGCGTTCTCAAAATCGGGGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACCCTACCAATAAGTTGGAGTCAGTACCAACAGGCGGTACGGCGGACCATCGGGTGCCAGTGCGTGAGTTTCGTTCAGCACTGTCCGGCGCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAG                                                                                                                        <  2:316292/250‑1                                                                                                                     C‑GGCTGGGACGGAAGGCGCTGTCGTTCTCAAAATCGGGGGAGCTGCATGACAAAGTCAGCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCCTTACCAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCTTGCTGTACG                                                                                                       <  2:89564/251‑1                                                                                                                                                  aAAAATCGGGGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACGATCAATAAGTTGGAGTCATTACCAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCTTGCTGTACGGCAGGCACCAGCTCTTCCGGGATCAGCG                                                                           <  2:183657/250‑1                                                                                                                                                  CAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCTTGCTGTACGGCAGGCACCAGCTCTTCCGGGATCAGCG                                                                           <  1:154906/251‑1                                                                                                                                                     AATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCTTGCTGTACGGCAGGCACCAGCTCTTCCGGGATCAGC                                                                            <  1:75459/247‑1                                                                                                                                                     AATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCTTGCTGTACGGCAGGCACCAGCTCTTCCGGGATCAGC                                                                            >  2:75459/1‑247                                                                                                                                                          GTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCTTGCTGTACGGCAGGCACCAGCTCTTCCGGGATCAGCGCGACGAT                                                                    >  1:152462/1‑250                                                                                                                                                                                  ggggATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCACCAGTCGGTACGGCTGACCATCGGGTGCCCGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCTTGCTGTACGGCAGGCACCAGCTCTTCCGGGATCAGCGCGACGATACAGCCGCCAAATCCGCCGCCGGTC                                           <  2:253752/247‑1                                                                                                                                                                                                    AAACACTATCAATAAGTTGGAGTCATTACCAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCTTGCTGTACGGCAGGCACCAGCTCTTCCGGGATCAGCGCGACGATACAGCCGCCAAATCCGCCGCCGGTCATGCGTACGCCACCTTTG                         >  1:103750/1‑251                                                                                                                                                                                                     AACACTATCAATAAGTTGGAGTCATTACCAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCTTGCTGTACGGCAGGCACCAGCTCTTCCGGGATCAGCGCGACGATACAGCCGCCAAATCCGCCGCCGGTCATGCGTACGCCACCTTTGT                        <  1:139465/251‑1                                                                                                                                                                                                               ATAAGTTGGAGTCATTACCAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCTTGCTGTACGGCAGGCACCAGCTCTTCCGGGATCAGCGCGACGATACAGCCGCCAAATCCGCCGCCGGTCATGCGTACGCCACCTTTGTCGCCAATCAC              >  1:305565/1‑251                                                                                                                                                                                                                     TGGAGTCATTACCAACAGTCGGTACGGCTGACCCTCGGGTGCCAGAGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCTTGCTGTACGGCAGGCACCCGCTCTTCAGGGATCCGCGCGCCGATACATCCGCCAAATCCGCCGACGGTCATGCGTACGCAACCTTTGTCGCCAATCCCAGCgtt        >  2:61391/1‑248                                                                                                                                                                                                                        gGTCATAACCAACAGTCGGTCCGGCTGACCATCGGGTGTCTGTGAGGGAGTGTCTTTCATCTCTTTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTTCGTCATATTGTTCAGCGACAGCTGGCTGTACGGCAGGCACCAGCTCTTCCGGGTTCAGCGCGACGATACAGCCGCCAAAGCCGCCGCCGGTCATGCGTACGCCCCCTTTGTCGCCAATCACAGCTTTGAt     <  2:293921/250‑2                                                                                                                                                                                                                          TCATTACCAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTACTACCTGTTTTTGCTTCATATTGTTCAGAGACAGCTTGCTGTACGGCAGGCACCAGCTCTTCCGGGATCAGCGCGACGATACAGCCGCCAAATCAGCCGCCGGTCATGCGTACGCCACCTTTGTCGCCAATCACAGCTTTGACG    >  1:36742/1‑250                                                                                                                                                                                                                           CATTACCAACATTCGTTACGGCTGCCCATCGGGTGCCATGGCGGGAGGTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACTTAAAAAGTCTATTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCTTGCTTTACGGCAGGCACCAGCTCTTCCGGGATCAGCGCGACGATACAGCCGCCAAATCCGCCGCCGGTCATGCGTACGCCACCTTTGTCGCCAATCACAGCTTTGACtat  <  2:243832/251‑4                                                                                                                                                                                                                               ACCAACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCTTGCTGTACGGCAGGCACCAGCTCTTCCGGGATCAGCGCGACG                                                                      <  1:188792/179‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTG‑AGGCAGCACCTGGCAC‑GGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/258130‑257908 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACAGTCGGTACGGCTGACCATCGGGTGCCAGTGCGGGAGTTTCGTTCAGCACTGTCCTGCTCCTTGTGATGGTTTACAAACGTAAAAAGTCTCTTTAATACCTGTTTTTGCTTCATATTGTTCAGCGACAGCTTGCTGTACGGCAGGCACCAGCTCTTCCGGGATCAGCGCGACGATACAGCCGCCAAATCCGCCGCCGGTCATGCGTACGCCACCTTTGTCGCCAATCACAGCTTTGACGAT  >  NC_000913/788785‑789028

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.