| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 313,543 | G→A | intergenic (‑301/‑1748) | ykgR ← / → insE1 | putative membrane protein YkgR/IS3 element protein InsE |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 313,543 | 0 | G | A | 100.0% | 57.1 / NA | 20 | intergenic (‑301/‑1748) | ykgR/insE1 | putative membrane protein YkgR/IS3 element protein InsE |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (9/11); total (9/11) | |||||||||||
GAGTTTGGTCAACCAATTTTTTGACATGTATCACAAATTTGAATAGATGTATTACATCAACTATCTTTTATTGCACCAACGTCATTGATATATGTCGCCTGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTGCTGAGGAGCATATCGCATCTCATCATAAT‑GTCGTATCTCCTGGGGTGTTATACAAGATATCGTTGTTGGTGACCTGGGAGAGGAATTGAGTTCTATTAAACCGTCAACTATGCCGGATACATACTGGATTACACTGCAGGCACGCCTTATGAGAGAACGTGCCGCAGTGACGGGTTAATTATCTGAAAGAATTTGTGAGGCTGTATCGGTTACTCATTGATTTGATAGTTTTACTCTCGGGAGAATAATAGATATTTAATCCATTAACGGAAACCAGCCAGTTCCTTTCGATGCCTGAATTTGATCCCATAGTTTATCCGG > NC_000913/313300‑313781 | gAGTTTGGTCAACCAATTTTTTGACATGTATCACACATTTGAATAGATGTATTACATCAACTATCTTTTATTGCACCAACGTCATTGATATATGTCGCCTGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTGCTGAGGAGCATATCGCATCTCATCATAAT‑GTCGTATCTCCTGGGGTGTTATACAAGATATCGTTGTTGGTGACCTGGGAGAGAAATTg > 1:306751/1‑249 (MQ=255) gTCAACCAATTTTTTGACATGTATCACAAATTTGAATAGATGTATTACATCAACTATCTTTTATTGCACCAACGTCATTGATATATGTCGCCTGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTGCTGAGGAGCATATCGCATCTCATCATAAT‑GTCGTATCTCCTGGGGTGTTATACAAGATATCGTTGTTGGTGACCTGGGAGAGAAATTGAGTTCTAtt > 2:123333/1‑251 (MQ=255) gcatccAATTTTTTGACATTTATCACAAAATTGAATAGATGTATTACATCAACTAACTTTTATTGCACCAACGTCAATGATATATGTCGCTTGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCATTCCGTGCGTTGATTGGTGCTGAGGAGCATATCGCATCTCATCATAAG‑GTCGTATCTCCTGGGTTGTTATATAAGATAGCGTTGTTGGTGACCTGGGAGAGAAATTGAGTTCTATTa < 2:287905/247‑1 (MQ=255) tGACATTTATCCCAAATTTGAATAGATGTATTACATCAACTATCTTTTATTGCACCAACTACATTGATATATGTCGCCTGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTGCTGAGGAGCATATCGCATCTCATCATAAT‑GTCGTATCTCCTGTGGTGTTATACAAGATATCGTTGTTGGTGACCTGGGAGAGAAATTGAGTTCTATTAAACCGTCAACTa < 1:230906/250‑1 (MQ=255) gACATGTATCACAAATTTGAATAGATGTATTACATCAACTATCTTTTATTGCACCAACGTCATTGATATATGTCGCCTGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGTGTTGATTGGTGCTGAGGAGCATATCGCATCTCATCATAAT‑GTCGTATCTCCTGGGGTGTTATACAAGATATCGTTGTTGGTGACCTGGGAGAGAGATTGAGTTCTATTAAACCGTCAACTATg < 1:27169/251‑1 (MQ=255) aCATGTATCCCAAATTTGAATAGATGTATTACATCAACTATCTTTTATTGCACCAACGTCATTGATATATGTCGCCTGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTGCTGAGGAGCATATCGCATCTCATCATAAT‑GTCGTATCTCCTGGGGTGTTATACAAGCTATCGTTGTTGGTGACTTGGGAGAGAAATTGAGTTCTATTAAACCGTCAACTATGc > 1:322987/1‑251 (MQ=255) ttGAATAGATGTATTACATCAACTATCTTTTATTGCACCAACGTCATTGATATATGTCGCCTGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTGCTGAGGAGCATATCGCATCTCATCATAAT‑GTCGTATCTCCTGGTGTGTTATACAAGATATCGTTGTTGGTGACCTGGGAGAGAAATTGAGTTCTATTAAACCGTCAACTATGCCGGATACATACTgg < 2:348917/250‑1 (MQ=255) tACATCAACTATCTTTTATTGCACCAACGTCATTGATATATGTCGCCTGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTGCTGAGGAGCATATCGCATCTCATCATAAT‑GTCGTATCTCCTGGGGTGTTATACAAGATATCGTTGTTGGTGACCTGGGAGAGAAATTGAGTTCTATTAAACCGTCAACTATGCCGGATACATACTGGATTACACTGCAGGc > 1:187526/1‑250 (MQ=255) cAACTATCTTTTATTGCACCAACGTCATTGATATATGTCGCCTGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTGCTGAGGAGCATATCGCATCTCATCATAAT‑GTCGTATCTCCTGGGGTGTTATACAAGATATCGTTGTTGGTGACCTGGGAGAGAAATTGAGTTCTATTAAACCGTCAACTATGCCGGATACATACTGGATTACACTGCAGGCACGCCt < 1:228050/251‑1 (MQ=255) aaCTATCTTTTATTGCACCAACGTCATTGATATATGTCGCCTGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTGCTGAGGAGCATATCGCATCTCATCATAAT‑GTCGTATCTCCTGGGGTGTTATACAAGATATCGTTGTTGGTGACCTGGGAGAGAAATTGAGTTCTATTAAACCGTCAACTATGCCGGATACATACTGGATTACACTGCAGGCACGCCtt < 1:123333/251‑1 (MQ=255) atatatGTCGCCTGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTGCTGAGGAGCATATCGCATCTCATCATAAT‑GTCGTATCTCCTGGGGTGTTATACAAGATATCGTTGTTGGTGACCTGGGAGAGAAATTGAGTTCTATTAAACCGTCAACTATGCCGGATACATACTGGATTACACTGCAGGCACGCCTTATGAGAGAACGTGCCGCAGTGACGGGtt > 1:173894/1‑250 (MQ=255) aaTGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTGCTGAGGAGCATATCGCATCTCATCATAAT‑GTCGTATCTCCTGGGGTGTTATACAAGATATCGTTGTTGGTGACCTGGGAGAGAAATTGAGTTCTATTAAACCGTCAACTATGCCGGATACATACTGGATTACACTGCAGGCACGCCTTATGAGAGAACGTGCCGCAGTGACGGGTTAATTATCTGAAAGAATTTGTGAGGCTGt > 1:231977/1‑250 (MQ=255) cGGGCGTTGATTGGTGCTGAGGAGCATATCGCATCTCATCATAAT‑GTCGTATCTCCTGGGGTGTTATACAAGATATCGTTGTTGGTGACCTGGGAGAGAAATTGAGTTCTATTAAACCGTCAACTATGCCGGATACATACTGGATTACACTGCAGGCACGCCTTATGAGAGAACGTGCCGCAGTGACGGGTTAATTATCTGAAAGAATTTGTGAGGCTGTATCGGTTACTCATTGATTTGATAGTTTTAct < 1:198039/251‑1 (MQ=255) gaggagCATATCGCATCTCATCAGAATTGT‑GTATCTCCTGGGGTGGTATACAAGATATCGTTGTTTGTGACCTGGGAGAGAAATTGAGTTCTATGAAACCGTCAACTATGCCGGATACATACTGGATTTCACTGCAGGCATGCCTTATGAGAGAACTTGCCGCAGTGACGGGTTAATTATCTGAAAGAATTTGTGAGGATGTATCGGTTACTCATGGATTTGATAGTTTTACTCTCGGTAGAATAATAGa < 2:230120/250‑1 (MQ=255) aggagCATATCTCATCTCATCTTAAT‑GTCGTATCTCCTGGGGTGTTATACAAGATATCGTTGTTGGTGACCTGGGAGAGAAATTGAGTTCTATTAAACCGTCAACTATGTCGGATACATACTGGATTACACTGCAGGCACGCCTTATGAGAGAACGTGCCTCAGTGACGTGTTAATTATCTGAAAGATTTTGTGAGGCTGTATCGGTTACTCATTGATTTGTTAGTTTTACTCTCTTTAGAATAATAGata < 1:276357/251‑1 (MQ=255) atatCGCATCTCATCATAAT‑GTCGTATCTCCTGGGGTGTTATACAAGATATCGTTGTTGGTGACCTGGGATAGAAATTGAGTGCTATTAAACCGTCAACTATGCCGGATACATACTGGATGACACTGCAGGCACGCCTTATGAGAGAACGTGcc < 2:17808/154‑1 (MQ=255) atatCGCATCTCATCATAAT‑GTCGTATCTCCTGGGGTGTTATACAAGATATCGTTGTTGGTGACCTGGGAGAGAACTTGAGTTCTATTAAACCGTCAACTATGCAGGATACATACTGGATTACACTGCAGGCACGCCTTATGAGAGAACGTGcc > 1:17808/1‑154 (MQ=255) t‑GTCGTATCTCCTGGGGTGTTATACAAGATATCGTTGTTGGTGACCTGGGAGAGAAATTGAGTTCTATTAAACCGTCAACTATGCCGGATACATACTGGATTACACTGCAGGCACGCCTTATGAGAGAACGTGCCGCAGTGACGGGTTAATTATCTGAAAGAATTTGTGAGGCTGTATCGGTTACTCATTGATTTGATAGTTTTACTCTCGGGAGAATAATAGATATTTAATCCATTAACGGAAAccagcc > 1:18678/1‑251 (MQ=255) gtgtTATACCAGATATCGTTGTTGGTGACCTGGGAGAGAAATTGAGTTCTATTAAACCGTCAACTATGCCGGAAACATACAGGAATACACTACAGGCACGCCTTAAGAGAGAAAGTGCCGCAGTGACGAGTTAATTATCTGAAAGACTTTGTGAGGCTGTATCGGATACTCATTGCTTTGATAGATTTTCTCACGGGAGAATAATAGCTATTTACTCCATTAACGGTAACCAGCCAGATTCTTTCGATgac > 2:227438/1‑249 (MQ=255) gACCGGGGTGAGAAATTGAGTTCTATTTAACCGTCAACTATGCCGGATACATACTGGATTACCCTTCAGGCACGCCTTATGAGAGAACGTGCCGCAGTGACGGGTTAATTATCTGAAAGAATTTGTGAGGCTGTATCGGTTACTCATTGATTTGATAGTTTTACTCTCGGGAGAATAATAGATATTTAATCCATTAACGGAAACCAGCCAGTTCCTTTCGATGCCTGAATTTGATCCCATAGTTTATCCgg < 2:231977/251‑1 (MQ=255) | GAGTTTGGTCAACCAATTTTTTGACATGTATCACAAATTTGAATAGATGTATTACATCAACTATCTTTTATTGCACCAACGTCATTGATATATGTCGCCTGAAGTCAGTTCCGGGAATGAGTCTGATCTCAAGACTGGCCCAGTCCGGGCGTTGATTGGTGCTGAGGAGCATATCGCATCTCATCATAAT‑GTCGTATCTCCTGGGGTGTTATACAAGATATCGTTGTTGGTGACCTGGGAGAGGAATTGAGTTCTATTAAACCGTCAACTATGCCGGATACATACTGGATTACACTGCAGGCACGCCTTATGAGAGAACGTGCCGCAGTGACGGGTTAATTATCTGAAAGAATTTGTGAGGCTGTATCGGTTACTCATTGATTTGATAGTTTTACTCTCGGGAGAATAATAGATATTTAATCCATTAACGGAAACCAGCCAGTTCCTTTCGATGCCTGAATTTGATCCCATAGTTTATCCGG > NC_000913/313300‑313781 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |