| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 907,652 | C→T | E211K (GAG→AAG) | ybjT ← | putative NAD(P)‑binding protein YbjT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 907,652 | 0 | C | T | 95.7% | 71.9 / ‑4.1 | 23 | E211K (GAG→AAG) | ybjT | putative NAD(P)‑binding protein YbjT |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (21/1); total (22/1) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.84e-01 | |||||||||||
CGTACCGCGTCATCGAAAGCGATCAGCCGTTGTGGGATGAGTGCACGTAGCGCGGTATCATCCGCCAGCAGATCGTGTTTCAGCCCCTGAATCAACGCCCTGGCGGTGGTGGGCGGTACGGAAGTAATCACATTGAGAAACCACACCGAAATCCAGCGGGTGGGGAGGGGGATGGGGATCAACCAGCGGCGCTTACCGCTCACCGCCATAAAATGTTCAAACTGTTGCTGATAACTGAGCACCTCTGGTCCGGCGGCTTCGAAGATGCGGTGTTCGCTGGCCGGATGATCTAACAACGCAACCAGATAGTGCAGCAAGTTTTCCAGCGCAATGGGCGTGGTGCGTGAACGAACCCAGCGCGGAGGCGTTAAGACTGGCAGGTTGTAGACCATATCGCGCATGACTTCGAACGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGT > NC_000913/907408‑907891 | cGTACCGCGTCATCGAAAGCGATCAGCCGTTGTGGGATGAGTGCACGTAGCGCGGTATCATCCGCCAGCAGATCGTGTTTCAGCCCCTGAATCAACGCCCTGGCGGTGGTGGGCGGTACGGAAGTAATCACATTGAGAAACCACACCGAAATCCAGCGGGTGGGGAGGGGGATGGGGATCAACCAGCGGCGCTTACCGCTCACCGCCATAAAATGTTCAAACTGTTGCTGATAACTGAGCACCTTTGGTcc > 1:105478/1‑251 (MQ=255) cgcgTCATCGAAAGCGATCAGCCGTTGTGGGATGAGTGCACGTAGCGCGGTATCATCCGCCAGCAGATCGTGTTTCAGCCCCTGAATCAACGCCCTGGCGGTGGTGGGCGGTACGGAAGTAATCACATTGAGAAACCACACCGAAATCCAGCGGGTGGGGAGGGGGATGGGGATCAACCAGCGGCGCTTACCGCTCACCGCCATAAAATGTTCAAACTGTTGCTGATAACTGAGCACCTTTGGTCcggcgg > 1:103061/1‑251 (MQ=255) cAGCCGTTGTGGGATGAGTGCACGTAGCGCGGTATCATCCGCCAGCAGATCGTGTTTCAGCCCCTGAATCAACTCCCTGGCGGTGGTGAGCGGTACGGAAGTAATCACATTTAGAAACCACACCGCCATCCAGCGGGTGGTGAGGGGGATGGGGATCAACCAGCGTCGCTTACCTCTCACCGCCCTAAAATGTTCAAACTGTTGCTGCTAACTGATCCCCTTTGGTCcgtctacttctcagatgcgttatt > 1:311312/1‑229 (MQ=255) cGTTGTGGGATGAGTGCACGTAGCGCGGTATCATCCGCCAGCAGATCGTGTTTCAGCCCCTGAATCAACGCCCTGGCGGTGGTGGGCGGTACGGAAGTAATCACATTGAGAAACCACACCGAAATCCAGCGGGTGGGGAGGGGGATGGGGATCAACCAGCGGCGCTTCCCGCTCACCGCCATAAAATGTTCAAACTGTTGCTGATAACTGAGCACCTTTGGTCCGGCGGCTTCGAAGATGCGGTGTTCGCt > 1:26068/1‑251 (MQ=255) gggATGAGTGCACGTAGCGCGGTATCATCCGCCAGCAGATCGTGTTTCAGCCCCTGAATCAACGCCCTGGCGGTGGTGGGCGGTACGGAAGTAATCACATTGAGAAACCACACCGAAATCCAGCGGGTGGGGAGGGGGATGGGGATCAACCAGCGGCGCTTACCGCTCACCGCCATAAAATGTTCAAACTGTTGCTGATAACTGAGCACCTTTGGTCCGGCGGCTTCGAAGATGCGGTGTTCGCTGGCCgg > 1:243245/1‑251 (MQ=255) gggCGGTACGGAAGAAACAACAATGAAAAACCCCACAGAAACCCAGCGGGGGGGGGGGGGGAGGGGGATAAACCGCCGGCTCTTACCCCCCACCGCCATAAAATGTTCAAACTGTTGCTGATAACTGAGCACCTTTGGTCCGGCGGCTTCGAAGATGCGGTGTTCGCTGGCCGGATGATCTAACAACGCAACCAGATAGTGCAGCAAGTTTTCCAGCGCAATGGGCGTGGTGCGTGAACGAACCCAGcgcg < 1:278676/251‑1 (MQ=255) aCCACACCGAAATCCAGCGGGTGGGGAGGGGGATGGGGATCAACCAGCGGCGCTTACCGCTCACCGCCATAAAATGTTCAAACTGTTGCTGATAACTGAGCACCTTTGGTCCGGCGGCTTCGAAGATGCGGTGTTCGCTGGCCGGATGATCTAACAACGCAACCAGATAGTGCAGCAAGTTTTCCAGCGCAATGGGCGTGGTGCGTGAACGAACCCAGCGCGGAGGCGTTAAGACTGGCAGGTTGTAGAcc > 1:164227/1‑251 (MQ=255) aagtCCAGCGGGTGGGGAGGGGGATGGGGATCAACCAGCGGCGCTTACCGCTCACCGCCATAAAATGGTCAAACTGTTGCTGATAACTGAGCACCTTTGGTCCGGCGGCTTCGAAGATGCGGAGTTCTCTGGCCGGAAGATCTAACAACGCAACCAGATAGGGCAGCACGGTTTCCAGCCCATTAGACGAGGTGCGTGAACGAACCCAGCGCGGAGGCGTTAAGACTGGCAGGGTGTAGACCATAACgcgc > 2:81512/4‑251 (MQ=255) aaaTCCAGCGGGTGGGGAGGGGGATGGGGATCAACCAGCGGCGCTTACCGCTCACCGCCATAAAATGTTCAAACTGTTGCTGATAACTGAGCACCTTTGGTCCGGCGGCTTCGAAGATGCGGTGTTCGCTGGCCGGATGATCTAACAACGCAACCAGATAGTGCAGCAAGTTTTCCAGCGCAATGGGCGTGGTGCGTGAACGAACCCAGCGCGGAGGCGTTAAGACTGGCa > 1:50996/1‑231 (MQ=255) cAGCGGGTGGGGAGGGGGATGGGGATCAACCAGCGGCGCTTACCGCTCACCGCCATAAAATGTTCAAACTGTTGCTGATAACTGAGCACCTTTGGTCCGGCGGCTTCGAAGATGCGGTGTTCGCTGGCCGGATGATCTAACAACGCAACCAGATAGTGCAGCAAGTTTTCCAGCGCAATGGGCGTGGTGCGTGAACGAACCCAGCGCGGAGGCGTTAAGACTGGCAGGTTGTAGACCATATCGCGCATGAc > 1:19699/1‑251 (MQ=255) aacgggaggtgAGGGGGATGGGGATCAACCAGCGGCGCTTAACGCTCACCGCCATAAAATGGTCACACTGTTGCTGCTAACTGAGCACCTTTGGTCCGGCGGCTTCGAAGATGCGGTGTTCGCTGGCCGGATGATCTAACAACGCAACCAGATAGTGCAGCAAGTTTTCCAGCGCAATGTGCGTGGTGCGGGAACGAACCCAGCGCGCAGGCGTTAAGACTGGCCGGTTGTAGGCCCTATcgcccttgaat > 2:333796/11‑243 (MQ=255) gggTGGGGAGGGGGATGGGGATCAACCAGCGGCGCTTACCGCTCACCGCCATAAAATGTTCAAACTGTTGCTGATAACTGAGCACCTTTGGTCCGGCGGCTTCGAAGATGCGGTGTTCGCTGGCCGGATGATCTAACAACGCAACCAGATAGTGCAGCAAGTTTTCCAGCGCAATGGGCGTGGTGCGTGAACGAACCCAGCGCGGAGGCGTTAAGACTGGCAGGTTGTAGACCATATCGCGCATGACTTCg > 1:185902/1‑251 (MQ=255) cAACCAGCGGCGATTACCGCTCACCGCCATACAATGTTCAAACTGTTGCTGATAACTGAGCACCTTTGGTCCGGCGGCTTCGCAGATGCGGTGTTCGCCGGCCGGATGATCTAACAACGCCACCAGATAGTGCAGCACGTTTTCCAGCGCCATGGGCGTGGTGAGTGAACGAACCCAGCGCGGGGGCGTTAAGACTGGCAGGTTGTAGACCATATCGCGCAAGACTTCGAACGCCCCCGCACCTGCGCCa > 2:18386/1‑250 (MQ=255) aaCCAGCGGCGCTTACCGCTCACCGCCATAAAATGTTCAAACTGTTGCTGATAACTGAGCACCTTTGGTCCGGCGGCTTCAAAGATGCGGTGTTCGCTGGCCGGATGATCTAACAACGCAACCAGAGAGTGCAGCAAGTTTTCCAGCGCAATGTGCGTGGTACGTGAACGAACCCAGCGCGAAGGCGTTAAGACTGGCAGGTTGTAGACCATATCGCGCATGACTTCGAACGCCGCGGAACCTgagcaaac > 1:194132/1‑244 (MQ=255) gcTTACCGCTCACCGCCATAAAATGTTCAAACTGTTGCTGATAACTGCGCACCTTTGGTCCGGCGGCTTCGAAGATGCGGTGTTCGCTGGCCGGATGATCTAACAACGCAACCAGATAGTGCAGCAAGTTTTCCAGCGCAATGGGCGTGGTGCGTGAACGAACCCAGCGCGGAGGCGTTAAAACTGGCAGGGTGTAGACCATATCGCGCATGCCTTCGAACGCCGCGGAACATGCGCCAACGATAATTCCg > 2:293763/1‑251 (MQ=255) cTTACCGCTCACCGCCATAAAATGTTCAAACTGTTGCTGATAACTGAGCACCTTTGGTCCGGCGGCTTCGAAGATGCGGTGTTCGCTGGCCGGATGATCTAACAACGCAACCAGATAGTGCAGCAAGTTTTCCAGCGCAATGGGCGTGGTGCGTGAACGAACCCAGCGCGGAGGCGTTACGACTGGCAGGTTGTAGACCATATCGCGCATGACTTCGAACGCCGCGGAACCTGCGCCAACGATAATTCCgg > 1:339464/1‑251 (MQ=255) tAAAATGTTCAAACTGTTGCTGATAACTGAGCACCTTTGGTCCGGCGGCTTCGAAGATGCGGTGTTCGCTGGCCGGATGATCTAACAACGCAACCAGATAGTGCAGCAAGTTTTCCAGCGCAATGGGCGTGGTGCGTGAACGAACCCAGCGCGGAGGCGTTAAGACTGGCAGGTTGTAGACCATATCGCGCATGACTTCGAACGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACg > 1:99861/1‑251 (MQ=255) cTGATAACTGAGCACCTTTGGTCCGGCGGCTTCGAAGATGCGGTGTTCGCTGGCCGGATGATCTAACAACGCAACCAGATAGTGCAGCAAGTTTTCCAGCGCAATGGGCGTGGTGCGTGAACGAACCCAGCGCGGAGGCGTTAAGACTGGCAGGTTGTAGACCATATCGCGCATGACTTCGAACGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGc > 1:134424/1‑250 (MQ=255) tGATAACTGAGCACCTTTGGTCCGGCGGCTTCGAAGATGCGGTGTTCGCTGGCCGGATGATCTAACAACGCAACCAGATAGTGCAGCAAGTTTTCCAGCGCAATGGGCGTGGTGCGTGAACGAACCCAGCGCGGAGGCGTTAAGACTGGCAGGTTGTAGACCATATCGCGCATGACTTCGAACGCCGCGGCACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGc > 1:107350/1‑249 (MQ=255) gATAACTGAGCACCTTTGGTCCGGCGGCTTCGAAGATGCGGTGTTCGCTGGCCGGATGATCTAACAACGCAACCAGATAGTGCAGCAAGTTTTCCAGCGCAATGGGCGTGGTGCGTGAACGAACCCAGCGCGGAGGCGTTAAGACTGGCAGGTTGTAGACCATATCGCGCATGACTTCGAACGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGc > 1:151228/1‑248 (MQ=255) tAACTGAGCACCTTTGGTCCGGCGGCTTCGAAGATGCGGTGTTCGCTGGCCGGATGATCTAACAACGCAACCAGATAGTGCAGCAAGTTTTCCAGCGCAATGGGCGTGGTGCGTGAACGAACCCAGCGCGGAGGCGTTAAGACTGGCAGGTTGTAGACCATATCGCGCATGACTTCGAACGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAAt > 1:190819/1‑251 (MQ=255) aCTGAGCACCTTTGGTCCGGCGGCTTCGAAGATGCGGTGTTCGCTGGCCGGATGATCTAACAACGCAACCAGATAGTGCAGCAAGTTTTCCATCGCAATGGGCGTGGTGCGTGAACGAACCCAGCGCGGAGGCGTTAAGACTGGCAGGTTGTAGACCATATCGCGCATGACTTCGAACGCCGAGGAACCTGCGCCAACGCTACTTCCGGCCCACAGTTCGGACCCTGGTACCATAGCTTCACGCAGaaagg > 2:100252/1‑248 (MQ=255) aCTGAGCACCTCTGGTCCGGCGGCTTCGAAGATGCGGTGTTCGCTGGCCGGATGATCTAACAACGCAACCAGATAGTGCAGCAAGTTTTCCAGCGCAATGGGCGTGGTGCGTGAACGAACCCAGCGCGGAGGCGTTAAGACTGGCAGGTTGTAGACCATATCGCGCATGACTTCGAACGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGACACGGGTACATTCGCTTCACGcgaaatgt > 2:293017/1‑244 (MQ=255) | CGTACCGCGTCATCGAAAGCGATCAGCCGTTGTGGGATGAGTGCACGTAGCGCGGTATCATCCGCCAGCAGATCGTGTTTCAGCCCCTGAATCAACGCCCTGGCGGTGGTGGGCGGTACGGAAGTAATCACATTGAGAAACCACACCGAAATCCAGCGGGTGGGGAGGGGGATGGGGATCAACCAGCGGCGCTTACCGCTCACCGCCATAAAATGTTCAAACTGTTGCTGATAACTGAGCACCTCTGGTCCGGCGGCTTCGAAGATGCGGTGTTCGCTGGCCGGATGATCTAACAACGCAACCAGATAGTGCAGCAAGTTTTCCAGCGCAATGGGCGTGGTGCGTGAACGAACCCAGCGCGGAGGCGTTAAGACTGGCAGGTTGTAGACCATATCGCGCATGACTTCGAACGCCGCGGAACCTGCGCCAACGATAATTCCGGCCCGCAGTTCGGTCACGGGTACATTCGCTTCACGCAGAATGT > NC_000913/907408‑907891 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |