New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 275149	NA (NA)	31 (1.070)	25/484	0.2	100%	noncoding (1/1195 nt)	IS5	repeat region
	?	NC_000913	579184 =	0 (0.000)					coding (411/411 nt)	ybcV	DUF1398 domain‑containing protein YbcV

AATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATTAAAAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTATTTCTTGAGAATTTAACATTTACAACCTTTTTAAGTCCTTT  >  NC_000913/578943‑579426                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                   tccagcggagaaggtcgccggccattcccagccttggggtaaaacggcgcgatgccgtccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctctgttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggactttttcgcaccctccTTAGCGTgg                                                                                                                                                                                                                                            <  2:150002‑M2/9‑1 (MQ=255)     gaggataaggtcgccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaagctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgcttaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgaaaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGa                                                                                                                                                                                                                                       <  2:254073‑M2/14‑1 (MQ=255)                  ccggccattaccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgatgaattcactgtcggcgagggtaagttgatgactcatggttgaccctgttatatggctccagatgacaaacatgaactcatctcagggacttgttcgccacttccTTAGCGAGGAAAGATTTATTTAGTGtt                                                                                                                                                                                                                          >  2:24062‑M2/225‑251 (MQ=255)                          taccagccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcctatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGc                                                                                                                                                                                                                  >  2:156598‑M2/217‑251 (MQ=255)                                ccttggggtaaaacggctcgatgacttccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCtctc                                                                                                                                                                                                              >  1:259402‑M2/211‑249 (MQ=255)                                                      gacttccacaaagttttgccttggcagaatctgctccatgcggtacaagaaaatctctttactggtctgacggctcttactgctgaattcactgacggcgaaggtaagttgaggactcatgaagaaccctgtgctatggctccagatgacaaacatgatctcatatcagggacttgttcgcacctttcGTAGCGTGTAAATATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTatcta                                                                                                                                                                                       <  2:227899‑M2/62‑3 (MQ=255)                                                          tccaccatgttttgccatggcagaatctgctccatgcgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAgg                                                                                                                                                                                    <  1:136776‑M2/65‑1 (MQ=255)                                                                                              ctggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTCAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGAAATc                                                                                                                                              >  2:93090‑M2/149‑251 (MQ=255)                                                                                                ggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATc                                                                                                                                              <  1:168764‑M2/103‑1 (MQ=255)                                                                                                 gacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaaggtgatgactcatgatgaaccctgttctatggctccagaggacaaacatgatctcatatcggggacttggtcgcaccgtccGTAGCGTGGAAAGATTTGTGTAGTGTTGTGAATGCTCTGAGTAAAGAGGAATGAATTATCAAAGGTATAGTAATAGCTTTTATGTTCGTGGATATTTGTAATCCAt                                                                                                                                           <  1:160656‑M2/106‑1 (MQ=255)                                                                                                  acaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATc                                                                                                                                          <  2:155859‑M2/107‑1 (MQ=255)                                                                                                             tcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCt                                                                                                                               >  1:17928‑M2/134‑251 (MQ=255)                                                                                                                   ctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAAt                                                                                                                                                                                                 >  2:306814‑M2/128‑179 (MQ=255)                                                                                                                   ctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGGGGTCTGAATGCTCTCAGTAAATAGTAAt                                                                                                                                                                                                 <  1:306814‑M2/52‑1 (MQ=255)                                                                                                                                    ccttccgaattcgctgtcggcgaaggtaaggtgatgactcatgatgaaccctgttatctcgcaccagatgacaaacatgatctcatatcaggtacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCTACCGGAAAACTCCTGCTTTAGCAAGCTTTTCCctggt                                                                                                        <  2:246470‑M2/141‑3 (MQ=255)                                                                                                                                    actgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATCGTAATATCTTTTATGTTCGTGGATATTTTTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGt                                                                                                         >  2:225977‑M2/111‑250 (MQ=255)                                                                                                                                       gctgaattcactgtcggcgaaggtcagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGAAAAACTCCTGCTTTAGAAAGTTTTTCCATGTATTg                                                                                                     >  2:341040‑M2/108‑251 (MQ=255)                                                                                                                                       gctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAat                                                                                                                                                                           <  2:61881‑M2/74‑1 (MQ=255)                                                                                                                                       gctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAat                                                                                                                                                                           >  1:61881‑M2/108‑181 (MQ=255)                                                                                                                                       gctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTAt                                                                                                       <  1:62093‑M2/142‑1 (MQ=255)                                                                                                                                           aattccctgtcggcgaaggtaagttgatgactcatgatgaaccctgctatatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTTTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTATTATCTTTTATTTTCGTGTATATTTGTAATCCATCGGAAAACTCTTGCTTTAGCAAGATTTTCCCTGTATTGCtgt                                                                                                 >  2:113337‑M2/104‑250 (MQ=255)                                                                                                                                                           aggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAACGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTg                                                                                 >  1:138456‑M2/88‑251 (MQ=255)                                                                                                                                                             gtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTgtgt                                                                                                                                                                                                                                >  1:16154‑M2/86‑106 (MQ=255)                                                                                                                                                             gtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacgtgttcgcaccttccTTAGCGTGGAAAGATTTgtgt                                                                                                                                                                                                                                <  2:16154‑M2/21‑1 (MQ=255)                                                                                                                                                                  ttgatctctcatgatgcagagtgttctctggctccagatgacaaacatgatctcatatcaggggcttgttcgcaccttccTTAGCGTGGAAAGAATTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAGGGTATAGTATTATATTTTATGTTCGAGATTATTTGTAATACATAGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTTATTTCTCTTGTTTTCa                                                                           >  2:54515‑M2/81‑250 (MQ=255)                                                                                                                                                                          tcatgatgaaccctgttctatggctccagatgccaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGAGTTCTGAGTGCTCTCAGTACATAGTAATGAATTATCAAAGGTCTAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATc                                                                                                                                          >  2:309766‑M2/73‑179 (MQ=255)                                                                                                                                                                          tcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGGATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATc                                                                                                                                          <  1:309766‑M2/107‑1 (MQ=255)                                                                                                                                                                           catgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCa                                                                   <  1:131567‑M2/178‑1 (MQ=255)                                                                                                                                                                            atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATAttt                                                                                                                                                    >  2:57931‑M2/71‑167 (MQ=255)                                                                                                                                                                            atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATAttt                                                                                                                                                    <  1:57931‑M2/97‑1 (MQ=255)                                                                                                                                                                                                                                          caccttccTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTATTTCTTGAGAATTTAACATTTACAACCTTTTTAAGTCCttt  >  1:251799‑M2/9‑251 (MQ=255)                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                   AATTAAACAAACCCTAAACAATGAGTTGAAATTTCATATTGTTAATATTTATTAATGTATGCCAGGTGCGATGAATCGTCATTGTATTCCCGGATTAACTATGTCCACAGCCCTGACGGGGAACTTCTCTGCGGGAGTGTCCGGGAATAATTAAAAACGATGCACACAGGGTTTAGCGCGTACATGTATTGTATTATGCCAACACCCCGGTGCTGACACGGAAGAAACCGGACGTTATGATTTAGCGTGGAAAGATTTGTGTAGTGTTCTGAATGCTCTCAGTAAATAGTAATGAATTATCAAAGGTATAGTAATATCTTTTATGTTCGTGGATATTTGTAATCCATCGGAAAACTCCTGCTTTAGCAAGATTTTCCCTGTATTGCTGAAATGTGATTTCTCTTGATTTCAACCTATCATAGGACGTTTCTATAAGATGCGTATTTCTTGAGAATTTAACATTTACAACCTTTTTAAGTCCTTT  >  NC_000913/578943‑579426

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.