New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	257908 =	NA (NA)	34 (1.170)	31/484	0.1	94.4%	noncoding (768/768 nt)	IS1	repeat region
	?	NC_000913	792873 =	2 (0.070)					coding (916/1473 nt)	modF	ABC family protein ModF

AATATCCAGCCACTGCTGCACCAGTTTTTGCTGGCGATCCGAAACGGCCTGATAAATGCCAATCGAATCAAAATAGCCAGAAAGAATCACATTACGCACGGTAGTGCTGACCCGGTAATCCAGATGCAAACTACTGCTGACGTAACCGATATGCTTTTTGATATCCCAGATGGTTTCGCCGCTGCCGCGACGTCGTCCGAAAAGCGTCAAATCGTTGCTGTAACCTTGCGGATGATCGCCAGTAACCAGGCTTAATAACGTCGATTTTCCTGCACCATTTGGCCCGACAATTTGCCAGTGTTCGCCTGGATTCACCTGCCAGCTAAGGTTATTAAGAATGGGGCGATCGTTATAAGAAACCACGCCATTGTTCAGCACAATGCGCGGTTCGTTGGCGGGTAAGGCGTGACGTGCTGAAGGTTCATCCGGCTCCGGCAGTTGCACACCTTCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTG  >  NC_000913/792628‑793119                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                       cctttgacgtggtgatatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaccactatcaataagttggagtcattaccCCAGGc                                                                                                                                                                                                                                                   >  1:175389‑M2/246‑251 (MQ=255)    ttgacgtggtgatatggattacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcatttccCCAGGCt                                                                                                                                                                                                                                                  <  1:314245‑M2/7‑1 (MQ=255)     tgacgtggtgatatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGGCTta                                                                                                                                                                                                                                                >  1:348912‑M2/242‑250 (MQ=255)              gatatggatgacggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacggagctaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaagcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGGCTTAATAACGTCg                                                                                                                                                                                                                                       <  1:327030‑M2/18‑1 (MQ=255)                 atggatgacggatggctggacgctgtatgaatcccgcctgaatggaaagctgcacggaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaagcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatccggcattatctgaacataaaacactaacaataagttggagtcatttccCCAGGCTTAATAACGTCGAtt                                                                                                                                                                                                                                    <  2:254330‑M2/21‑1 (MQ=255)                        acggatggctggccgctgtatgaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaatcagttggagtcattaccCCAGGCTTAATAACGTCGATTTTCCTgcc                                                                                                                                                                                                                            >  1:51449‑M2/223‑250 (MQ=255)                              ggctggccgctgtatgaatcccgcctgaagggaacgctgcacgtaatcagcaagcgatatacgcagcgaattgcgcggcataacctgcatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgaccaagacatcggcaattatctgaacataaaaaattaccaataagttggagtcattaccCAAGGCTTAATAACGACGACTTTACTGCACCAttt                                                                                                                                                                                                                      >  2:320057‑M2/217‑251 (MQ=255)                                            ggaatcccgcctgaagggaaagctgcacgtaatcagcaatcgatatacgcagcgaattgtgcggcataacctgaatctgaggcagcacctggcacggctgggacggaaggcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGGCTTAATAACGTCGATTTTCCTGCACCATTTGGCCCGACAATTTg                                                                                                                                                                                                        <  1:193147‑M2/49‑1 (MQ=255)                                             gaatcccgcctgaagggaaagctgcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaagctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGGCTTAATAACGTCGATTTTCCTGCACCATTTGGCCCGACAATTTGc                                                                                                                                                                                                       <  1:161421‑M2/50‑1 (MQ=255)                                                                    gcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGGCTTAATAACGTCGATTTTCCTGCACCATTTGGCCCGACAATTTGCCAGTGTTCGCCTGGATTCACCt                                                                                                                                                                                 <  1:232904‑M2/72‑1 (MQ=255)                                                                    gcacgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGGCTTAATAACGTCGATTTTCCTGCACCATTTGGCCCGACAATTTGCCAGTGTTCGCCTGGATTCACCTg                                                                                                                                                                                >  1:70450‑M2/179‑251 (MQ=255)                                                                    gaacgtaataagcaagcgatatacgcagcgaattgtgcggcctaacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtagttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGGCTTACTAACGTCGATTTTCCTGCACCATTTGGCCCGACAATTTGCCAGTGATCGCCTGGATTCACCTg                                                                                                                                                                                >  1:70454‑M2/179‑251 (MQ=255)                                                                       cgtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggccgggacggatgtcgctgtcgttctcaaaatctgtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagacattaccCCAGGCTTAATAACGTCGATTTTCCTGCACCATTTGGCCCTACAATTTGCCAGTGTTCGCCTGGATTCACCTGCCa                                                                                                                                                                             <  1:218160‑M2/76‑1 (MQ=255)                                                                        gtaatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGGCTTAATAACGTCGATTTTCCTGCACCATTTGGCCCGACAATTTGCCAGTGTTCGCCTGGATTCACCTGcc                                                                                                                                                                              >  1:284771‑M2/175‑249 (MQ=255)                                                                          aatcagcaagcgatatacgcagcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGGCTTAATAACGTCGATTTTCCTGCACCATTTGGCCCGACAATTTGCCAGTGTTCg                                                                                                                                                                                              <  1:217572‑M2/59‑1 (MQ=255)                                                                          aatcagcaagcgatatacgcagcgaattgagcggcataaactgaatctgaggcagcacctggcacggctgggacggaagacgctgtcgttctcaaaatcggtggggctgcatgaaaaagtcatcgggcattatctgaacatacaacactatcaataagttggagtcattaccCCAGGCTTAATAACGTCGATTTTCCTGCACCATTTGGCCCGACAATTTGCCAGTGTTCg                                                                                                                                                                                              >  2:217572‑M2/173‑231 (MQ=255)                                                                              cgcaagcggtatacgccgcgaattgagcggcataacctgaatctgaggcagcacctggcacggctgggacggaagtccctgtcgttctcaaaatcggaggagctgcatgacaccgtcatcgggcattatctgaacataaaacactatcaataaattggaggcattaccCCAGGCTTAATAACATCGATTTTCCTGAACCATTTGGCCGTACAATTTGACAGTGTTAGCCTGGCTTCACCTGCCAGCTAAgg                                                                                                                                                                      >  2:25582‑M2/169‑251 (MQ=255)                                                                                                     gtattGCTGACCCGGTAATCCATATGCAAACTACTGCTGACGTAACCTATATGCTTTTTGATATCCCATATGTTTTCGCCGCTGCCGCGACGTCGTCCGAAAAGCGTCAAATCGTTGCTGTAACCTTGCGGTTGATCGCCAGTAACCAGGCTTAATAACGTCGATTTTCCTGCACCATTTGGCCCGACAATTTGCCTGTGTTCGCCTGGATTCACCTGCCAGCTAAGGTTATTAAGAATGGGGCGATCGtt                                                                                                                                               <  1:101908/247‑1 (MQ=255)                                                                                                                                gcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGGCTTAATAACGTCGATTTTCCTGCACCATTTGGCCCGACAATTTGCCAGTGTTCGCCTGGCTTCACCTGCCAGCTaa                                                                                                                                                                        >  2:335455‑M2/119‑199 (MQ=255)                                                                                                                                gcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGGCTTAATAACGTCGATTTTCCTGCACCATTTGGCCCGACAATTTGCCAGTGTTCGCCTGGATTCACCTGCCAGCTaa                                                                                                                                                                        <  1:335455‑M2/81‑1 (MQ=255)                                                                                                                                gcacctggcacggctgggacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGGCTTAATAACGTCGATTTTCCTGCACCATTTGGCCCGACAATTTGCCAGTGTTCGCCTGGATTCACCTGCCAGCTAAGGTTATTAAGAATGGGGCGATCGTTATAAGAAACCACGCCATTGTTCAGcac                                                                                                                    <  1:25582‑M2/133‑1 (MQ=255)                                                                                                                                             cgggtacggaagtcgctgtcgttctcaaaatcggtggagctgcatgacaaagttatcggtcattatctgaacataaaacactatcattaagttggagtcattaccCCAGGCTTAATAACGGCTATTTTCCTGCACCATGTGGCCCGACAATTTGCCAGTGTTCGCCTGGATTCACCTGCCAGCTAAGGTTATTAAGAATGGGGCGATCGTTATAAGAAACCACGCCATTGTTCAGCACAATTCGCGGTTCg                                                                                                       <  1:232999‑M2/146‑1 (MQ=255)                                                                                                                                                                    ctcaaaatcggtggagctgcatgacaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGGCTTAATAACGTCGATTTTCCTGCACCATTTGGCCCGACAATTTGCCAGTGTTCGCCTGGATTCACCTGCCAGCTAAGGTTATTAAGAATGGGGCGATCGTTATAAGAAACCACGCCATTGTTCAGCACAATGCGCGGTTCGTTGGCGGGTAAGGCGTGACGTGc                                                                                >  1:199153‑M2/83‑251 (MQ=255)                                                                                                                                                                             ggtggagctgcatgacaaagtcatcaagccttatctgaacataaaccactatcaataagttggagtcattaccCCAGGCTTAATAACGTCGATTTTCCTGCACCATTTGGCCCGACAATTTGCCAGTGTTCGCCTGGATTCACCTGCCAGCTAAGGTTATTAAGAATGGGGCGATCGTTATAAGAAACCACGCCATTGTTCAGCCCAATGCGCGGTTCGTTGGCGGGTAAGGCGTGACGTGCTGCAGGTTc                                                                       >  1:272071‑M2/74‑251 (MQ=255)                                                                                                                                                                                       aaggacaaaatgacagggaattatctgaccataaaaccctatcaataagttggagtcattaccCCAGGCTTAATACCGTCGATTGTCCTGCACCATTTGGCCCGACAATTTGCCAGTGTTCGCCTGGATTCACCGGCCAGCTAAGGTTATTAAGAATGGGGCGATCGTTATAAGAAACCACGCCATTGTTCAGCACAATGCGCGGTTCGTTGGCGGGTAAGGCGTGACGTGCTGAAGGTTCAtccggctcc                                                             <  2:70686‑M2/188‑1 (MQ=255)                                                                                                                                                                                          cgcgACGTCGTCCGAAAAGCGTCACATCGTTGCTGTAACCTTGCGGATGATCGCCAGTAACCAGGCTTAATAACGTCGATTTTCCTGCACCATTTGGCCCGACAATTTGCCCGTGTTCGCCTGTATTCACCTGCCAACTACGGTTATTACGAATGGGGCGCTCGTTATAAGAAACCACGCCATTGTTAAGAACAATGCGCGGTTCGTTGGCGGGGAAGGCGTGACGTGATGAAGGTTCAtccgggtccggg                                                          >  2:133869/1‑250 (MQ=255)                                                                                                                                                                                           acaaagtcatcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGGCTTAATAACGTCGATTTTCCTGCACCATTTGGCCCGACAATTTGCCAGTGTTCGCCTGGATTCACCTGCCAGCTAAGGTTATTAAGAATGGGGCGATCGTTATAAGAAACCACGCCATTGTTCAGCACAATGCGCGGTTCGTTGGCGGGTAAGGCGTGAAGTGCTGAAGGTTCatccggctccggcc                                                         >  1:115063‑M2/60‑250 (MQ=255)                                                                                                                                                                                             aaagtcatcaggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGGCTTAATAACGTCGATTTTCCTGCACCATTTGGCCCGACAATTTGCCAGTGTTCGCCTGGATTCACCTGCCAGCTAAGGTTATTAAGAATGGGGCGATCGTTATAAGAAACCACGCCATTGTTCAGCACAATGCGCGGTTCGTTGGCGGGTAAGGCGTGACGTGCTGAAGGCTCATCCGGCTCCGGCagg                                                       >  1:161844‑M2/58‑250 (MQ=255)                                                                                                                                                                                                  catcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGGCTTAATAACGTCGATTTTCCTGCACCATTTGGCCCGACAATTTGCCAGTGTTCGCCTGGATTCACCTGCCAGCTAAGGTTATTAAGAATGGGGCGATCGTTATAAGAAACCACGCCATTGTTCAGCACAATGCGCGGTTCGTTGGCGGGTAAGGCGTGACGTGCTGAAGGTTCATCCGGCTCCGGCAGTTGcac                                                  >  1:154093‑M2/53‑251 (MQ=255)                                                                                                                                                                                                  catcgggcattatctgaacataaaacactatcaataagttggagtcattaccCCAGGCTTAATAACGTCGATTTTCCTGCACCATTTGGCCCGACAATTTGCCAGTGTTCGCCTGGATTCACCTGCCAGCTAAGGTTATTAAGAATGGGGCGATCGTTATAAGAAACCACGCCATTGTTCAGCACAATGCGCGGTTCGTTGGCGGGTAAGGCGTGACGTGCTGAAGGTTCATCCGGCTCCGGCAGTTGca                                                   <  1:73183‑M2/198‑1 (MQ=255)                                                                                                                                                                                                                               atcaataagttggagtcattaccCCAGGCTTAATAACGTCGATTTTCCTGCACCATTTGGCCCGACAATTTGCCAGTGTTCGCCTGGATTCACCTGCCAGCTAAGGTTATTAAGAATGGGGCGATCGTTATAAGAAACCACGCCATTGTTCAGCACAATGCGCGGTTCGTTGGCGGGTAAGGCGTGACGTGCTGAAGGTTCATCCGGCTCCGGCAGTTGCACACCTTCAAGCTGTTCACTATGCGCCAGtt                     <  1:203012‑M2/228‑1 (MQ=255)                                                                                                                                                                                                                               aacaataagatggaggcatttccCCAGGCTTAAGAACGTCGATTTTCCTGCACCATTTGTCCCGACAATTTGCCAGTGTTCGCCTGGATTCACCTGCCAGCTAAGGTTATTAAGAATGGGGCGATCGTTATAAGAAACCACGCCAGTGTTCAGCACAATGCGCGGTTCGTTGGCGGGTAAGGCGTGACGTGCTGAAGGTTCATCCGGCTCCGGCAGTTGCACACCTTCAAGCTGTTCACTATGCGCCAGtt                     <  2:154093‑M2/228‑1 (MQ=255)                                                                                                                                                                                                                                    taagttggagtcattaccCCAGGCTTAATAACGTCGATTTTCCTGCACCATTTGGCCCGACAATTTGCCAGTGTTCGCCTGGATTCACCTGCCAGCTAAGGTTATTAAGAATGGGGCGATCGTTATAAGAAACCACGCCATTGTTCAGCACAATGCGCGGTTCGTTGGCGGGTAAGGCGTGACGTGCTGCAGGTTCATCCGGCTCCGGCAGTTGCACACCTTCAAGCTGTTCACTATGCGCCAGTTGcgcg                >  1:139338‑M2/19‑251 (MQ=255)                                                                                                                                                                                                                                    aaaggtggagtcattaccCCAGGCTTAATAACGTCGATTTTCCTGCACCATTGGGCCCGACAATTTGCCAGTGTGCGCCTGGATTCACCTGCCAGCTAAGGTTATTAAGAATGGGGCGATCGTTAGAAGAACCCACGCCATTGTTCAGCACAATGCGCGGTTCGTTGGCGGGTAAGGCGTGACGTGCTGAAGGTTCATCCGGCTCCGGCAGTTGCACACCTTCAAGCTGTTCACTATGCGCCAGTTGcgcg                <  2:284771‑M2/233‑1 (MQ=255)                                                                                                                                                                                                                                               cattaccCCAGGCTTAATAACGTCGATTTTCCTGCACCATTTGGCCCGACAATTTGCCAGTGTTCGCCTGGATTCACCTGCCAGCTAAGGTTATTAAGAATGGGGCGATCGTTATAAGAAACCACGCCATTGTTCAGCACAATGCGCGGTTCGTTGGCGGGTAAGGCGTGACGTGCTGAAGGTTCATCCGGCTCCGGCAGTTGCACACCTTCAAGCTGTTCACTATGCGCCAGTTTCGCGCCGCGTGCttg     >  1:104377‑M2/8‑251 (MQ=255)                                                                                                                                                                                                                                                  taccCCAGGCTTAATAACGTCGATTTTCCTGCACCATTTGGCCCGACAATTTGCCAGTGTTCGCCTGGATTCACCTGCCAGCTAAGGTTATTAAGAATGGGGCGATCGTTATAAGAAACCACGCCATTGTTCAGCACAATGCGCGGTTCGTTGGCGGGTAAGGCGTGACGTGCTGAAGGTTCATCCGGCTCCGGCAGTTGCACACCTTCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGCttgttg  >  1:339002‑M2/5‑251 (MQ=255)                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                       AATATCCAGCCACTGCTGCACCAGTTTTTGCTGGCGATCCGAAACGGCCTGATAAATGCCAATCGAATCAAAATAGCCAGAAAGAATCACATTACGCACGGTAGTGCTGACCCGGTAATCCAGATGCAAACTACTGCTGACGTAACCGATATGCTTTTTGATATCCCAGATGGTTTCGCCGCTGCCGCGACGTCGTCCGAAAAGCGTCAAATCGTTGCTGTAACCTTGCGGATGATCGCCAGTAACCAGGCTTAATAACGTCGATTTTCCTGCACCATTTGGCCCGACAATTTGCCAGTGTTCGCCTGGATTCACCTGCCAGCTAAGGTTATTAAGAATGGGGCGATCGTTATAAGAAACCACGCCATTGTTCAGCACAATGCGCGGTTCGTTGGCGGGTAAGGCGTGACGTGCTGAAGGTTCATCCGGCTCCGGCAGTTGCACACCTTCAAGCTGTTCACTATGCGCCAGTTGCGCGACGAGTGCTTGTTG  >  NC_000913/792628‑793119

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.