Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 458,790 IS186 (–) +6 bp :: Δ1 bp intergenic (+90/‑93) clpX → / → lon ATP‑dependent Clp protease ATP‑binding subunit ClpX/Lon protease

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 458790 =1 (0.040)28 (0.980) 25/478 0.2 96.5% intergenic (+90/‑98) clpX/lon ATP‑dependent Clp protease ATP‑binding subunit ClpX/Lon protease
?NC_000913 608008 = NA (NA)noncoding (2/1345 nt) IS186 repeat region
* ? NC_000913 = 4587951 (0.040)19 (0.670) 16/476 0.7 94.9% intergenic (+95/‑93) clpX/lon ATP‑dependent Clp protease ATP‑binding subunit ClpX/Lon protease
?NC_000913 = 609351 NA (NA)noncoding (1345/1345 nt) IS186 repeat region

AAGCCGCACTGCTCGATACCATGTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGTCTGGAAGCGGCGATGGACCATGATAAAAAAA  >  NC_000913/458555‑459035
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                
aaGCCGCACTGCTCGATACCATGTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagc                                                                                                                                                                                                                                        <  1:249278‑M1/251‑11 (MQ=255)
 aGCCGCACTGCTCGATACCATGTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcg                                                                                                                                                                                                                                       <  1:26480‑M1/251‑12 (MQ=255)
 aGCCGCACTGCTCGATACCATGTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcg                                                                                                                                                                                                                                       <  1:145761‑M1/251‑12 (MQ=255)
        aatgacattcccccggggcctgaagcaatccccagccgtagcagagttgcagcatcacgaaagtcgctggggcgggttagtgccccggcattacccgccgaagtatccagttctgcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggctcgttaaagcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTa                                                                                                                                                                                                                                >  2:167200‑M1/228‑251 (MQ=255)
                 cccccggggccgtaagccagccccagacgtagcagagttgcagcatcacgaatttcgcggcggcgggttagagccccggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAAt                                                                                                                                                                                                                       <  2:159919‑M1/33‑1 (MQ=255)
                 cccccggggccgtaagccagccccagacgtagcagagttgcagcatcacgaatttcgcggcggcgggttagagccccggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgctgatgggGAAACATCCCCATATACTGACGTACATGTTAAt                                                                                                                                                                                                                       >  1:97513‑M1/219‑251 (MQ=255)
                  ccccggggccgtaagccagccccagacgtagcagagttgcagcatcacgaatttcgcggcggcgggttagagccccggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgcgagtcattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATCCTGACGTAAATGTTAAt                                                                                                                                                                                                                       <  1:344606‑M1/33‑1 (MQ=255)
                        aCGATCTGCCGTCCATGGAAGCCGTCGAAAAAGTGGTTATCGAAGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatct                                                                                                                                                                                                                >  1:130541‑M1/1‑217 (MQ=255)
                           aTCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGACATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCACTTTAATTTTTCCTCTATTCTCGGCGTTGAATGAGTGGGAAACCtcccataagcgctaacttaaggaatgaaccatctga                                                                                                                                                                                                              >  1:173656‑M1/1‑214 (MQ=255)
                               gCCGTCCATGGAAGACTGCGAAAAAGTTGTTAGCGACGAGTCGGTAAGTGATGGTAAAAGCAAATGGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAAGAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGTCGTTGAATGTGTGGGAAACAgcccataagcgctaacttaagggttgaactgtctgaagaat                                                                                                                                                                                                         <  2:41412‑M1/251‑42 (MQ=255)
                                  gTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcg                                                                                                                                                                                                      <  1:30896‑M1/251‑45 (MQ=255)
                                     ccccagacgtagcagagttgcagcatcacgaatttcgcggcggcgggttagagccccggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAg                                                                                                                                                                                                                     >  1:279163‑M1/199‑233 (MQ=255)
                                     ccccagacgtagcagagttgcagcatcacgaatttcgcggcggcgggttagagccccggcattacgtgacgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagcgtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaatttagcgcttatgggTAAACATCCCCATATACTGCCGTACATGTTAAtaa                                                                                                                                                                                                                     <  2:279163‑M1/35‑2 (MQ=255)
                                                   gagttgcagcatcacgaatttcgcggcggcgggttagagccccggcattacgtgccgaaggatccagttcttcgtgcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATAGACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCttatta                                                                                                                                                                                     >  1:307654‑M1/185‑251 (MQ=255)
                                                         cagcatcacgaatttcgcggcggcgggttagagccccggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGc                                                                                                                                                                               <  1:176479‑M1/73‑1 (MQ=255)
                                                               cacgaagttcgcggcggcgggttagagccccggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGaaa                                                                                                                                                                          >  1:204562‑M1/173‑250 (MQ=255)
                                                                 cgaatttcgcggcggcgggttagagtcccgtcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgcccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTa                                                                                                                                                                       >  1:189867‑M1/171‑251 (MQ=255)
                                                                 cgaatttcgcggcggcgggttagagccccggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGaaa                                                                                                                                                                          >  2:110512‑M1/171‑248 (MQ=255)
                                                                 cgaatttcgcggcggcgggttagagccccggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGaaa                                                                                                                                                                          <  1:110512‑M1/78‑1 (MQ=255)
                                                                 cgaatttcgcggcggcgggttagagccccggcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAAtt                                                                                                                                                                        <  1:285045‑M1/80‑1 (MQ=255)
                                                                                           ccccgcatttcgtgtcgaagtatccagttcttcgggcttaccaatatgggccagaactgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaatacctcaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCt                                                                                                                                             >  2:285045‑M1/145‑251 (MQ=255)
                                                                                               gcattacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttacatcatatcaggcgtaataacacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGCTGGCGTTAAGCACAATCGTGTAATCTGATTACCTGGCGGAAATTAAACTAAGCGAGAGCTCTATGAATCCTg                                                                                                                                            <  2:333213‑M1/108‑1 (MQ=255)
                                                                                                 attacgtgccgaagtatccagttcttcgggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGt                                                                                                                                       <  1:147358‑M1/113‑1 (MQ=255)
                                                                                                       gATTTATTGCAAGCCGGAAGAGCAACAGGCATCTGGTGAATAAGTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGTATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataatcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttgtgtaggctgtcagggata                                                                                                                                  <  2:254472‑M1/250‑113 (MQ=255)
                                                                                                              ggCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtccc                                                                                                                           <  1:104720‑M1/250‑120 (MQ=255)
                                                                                                                            gggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACg                                                                                                                                                                                                                                  >  1:141040‑M1/112‑133 (MQ=255)
                                                                                                                            gggcttaccaatatgggccagaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACg                                                                                                                                                                                                                                  <  2:141040‑M1/22‑1 (MQ=255)
                                                                                                                                     aTCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtaccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggagggcagggatactgtcccacgaatggccacctgtaagctcc                                                                                                    >  1:27560‑M1/1‑108 (MQ=255)
                                                                                                                                      tCTGGGGAATAATTAACCACTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTGCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggccacctgtaagctcca                                                                                                   <  2:70409‑M1/250‑144 (MQ=255)
                                                                                                                                        ataggccataattgctgaccagttatcgtgagagtaattaatcggcacgttaaatcatatcaggcgtaataccacaaaccttaagttagcgcttatgggGAAACATCCCCATATAATGACGTACATGTTAATAGATGGCGTGACGCACAGTCGTATCATATGATTACCTGGCGGAAATTAAACTAAGCGAGAGCTCTATGAATCTTGCACGTTCTGAAAGCATTGAAATCCCcgtattgccggtgctcgct                                                                                                <  2:185183‑M1/152‑10 (MQ=255)
                                                                                                                                               agaattgctgaccagttatcgtgagagtaattcatcggcacgttaaatcatatcaggcgtaataccacaacccttaagttagcgcttatggtGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCTGCGCGATGtggtgg                                                                                         <  1:106126‑M1/159‑1 (MQ=255)
                                                                                                                                                    aaCCATTCCCATACAATTAGTTAACCCAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgccgcgttaagacgatgcctcgcgttctgcaattgcgttttgtaggctgtcaggtatactgtcccacgaatggccaccggtaagctccagatgaccatttttgt                                                                                    <  2:190878‑M1/251‑159 (MQ=255)
                                                                                                                                                                 cAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGATCa                                                                       <  1:153752/251‑1 (MQ=255)
                                                                                                                                                                           aCCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCGATTCGCGGCGTTGAATGTGGGGGAAACAtcccataagctctaacttaagggttgaaccatctgaagaatgcgaagcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggccacctgtaagctccagatgaccatttttgttattcgccacaacgagttagttc                                                             <  2:345610‑M1/251‑182 (MQ=255)
                                                                                                                                                                               catcggcacgttaaatcatatcaggcgtaataccacatcccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTc                                                         >  1:260003‑M1/61‑251 (MQ=255)
                                                                                                                                                                                         ttaaatcatatcaggcgtaatcccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGaa                                                <  1:130600‑M1/200‑1 (MQ=255)
                                                                                                                                                                                         aTTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGAGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggccacctgtaagctccagatgaccatttttgttattctccacaacgagttagttcttcttttcggatcc                                               >  2:252548‑M1/1‑56 (MQ=255)
                                                                                                                                                                                          taaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCTGCGCGAtgt                                                                                              >  2:141608‑M1/50‑203 (MQ=255)
                                                                                                                                                                                          taaatcatatcaggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCTGCGCGAtgt                                                                                              <  1:141608‑M1/154‑1 (MQ=255)
                                                                                                                                                                                           tttATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggccacctgtaagctccagatgaccatttttgttattctccacaacgagttagttcttcttttcggatccg                                              <  1:252548‑M1/250‑197 (MQ=255)
                                                                                                                                                                                                     aggcgtaataccacaacccttaagttagcgcttatgggGAAACATCCCCATATACTGACGAACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGtt                                   <  1:205639‑M1/213‑1 (MQ=255)
                                                                                                                                                                                                          aTTTTTACTCTATTCTCGGCGTTGAATGAGGGGGAAAAAtccaataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggagactcgttaagacgatgcctcgcgttcttcaattgcgttttgtcggctgtcagggatactgtcccacgaatggccaactgtaagatccagatgaccatttttgttattctccacaacgagttaggtcttcttttcggcaccggcacttctggggggg                               >  2:164347‑M1/1‑39 (MQ=255)
                                                                                                                                                                                                              ttactctattCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttaagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctgtcagggatactgtcccacgaatggccccctgtaagctccagatgaccatttttgttattctccacaacgaattagttcttcttttagtctccggcacttctggggtggaaatc                          >  2:231276‑M1/4‑35 (MQ=255)
                                                                                                                                                                                                               tCCTCTATTCTCGGCGTTGAATGTGGGGGAAACAtcccataagcgctaacttcagggttgaaccatctgaagaatgcgacgcctcggtgcctcgttacgacgatgcctcgcgttcttcaattgcgttttgtaggctgacagggatcctgtcccacgaatggccacctgtaagctccagatgaccatttttgttattctccacaacgagttagttcttcttttcggatccggcacttctgggggggaaatcc                         >  2:253835‑M1/1‑34 (MQ=255)
                                                                                                                                                                                                                     cccttaagttagcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGTCTGGAAGCGGCGAt                   <  2:161238‑M1/229‑1 (MQ=255)
                                                                                                                                                                                                                               agcgcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGTCTGGAAGCGGCGATGGACCATGAt         >  1:40191‑M1/13‑251 (MQ=255)
                                                                                                                                                                                                                                  gcttatgggGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGTCTGGAAGCGGCGATGGACCATGATaaa      >  1:159919‑M1/10‑251 (MQ=255)
                                                                                                                                                                                                                                      cgggggaAACAtcacataagcgcaaacttaagggttgaaccatctgaagaatgcgtcgcctcggtgcctcgttaagacgatgcctcgcgttcttcaattgcgttttgtaggctggccgcgatactgtcccccgaatggccccctgtaagatccagatgaccatttttgttattctccacaacacgttcgttcttcttttcggatccgtaacttctgggggggaaatccagcaatggctggattttatcgtc  >  2:183711‑M1/2‑11 (MQ=255)
                                                                                                                                                                                                                                                |                                                                                                                                                                                                                                                
AAGCCGCACTGCTCGATACCATGTACGATCTGCCGTCCATGGAAGACGTCGAAAAAGTGGTTATCGACGAGTCGGTAATTGATGGTCAAAGCAAACCGTTGCTGATTTATGGCAAGCCGGAAGCGCAACAGGCATCTGGTGAATAATTAACCATTCCCATACAATTAGTTAACCAAAAAGGGGGGATTTTATCTCCCCTTTAATTTTTCCTCTATTCTCGGCGTTGAATGTGGGGGAAACATCCCCATATACTGACGTACATGTTAATAGATGGCGTGAAGCACAGTCGTGTCATCTGATTACCTGGCGGAAATTAAACTAAGAGAGAGCTCTATGAATCCTGAGCGTTCTGAACGCATTGAAATCCCCGTATTGCCGCTGCGCGATGTGGTGGTTTATCCGCACATGGTCATCCCCTTATTTGTCGGGCGGGAAAAATCTATCCGTTGTCTGGAAGCGGCGATGGACCATGATAAAAAAA  >  NC_000913/458555‑459035

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.