| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,869,314 | G→A | S120S (TCG→TCA) | yeaH → | DUF444 domain‑containing protein YeaH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,869,314 | 0 | G | A | 97.0% | 87.3 / NA | 33 | S120S (TCG→TCA) | yeaH | DUF444 domain‑containing protein YeaH |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (14/18); minor base C (0/1); total (14/19) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
CGTTCGGTGACTGACGTCGACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCGAAAGATGAGTATCT‑TGATCTGCTCTTTGAAGATTTGGCCTTACCGAATCTGAAACAAAACCAACAACGCCAGCTGACCGAATATAAAACGCATCGGGCGGGTTATACCGCTAACGGCGTTCCGGCCAATATCAGCGTTGTGCGTTCATTGCAGAACTCACTGGCGCGACGCACAGCCATGACGGCAGGCAAGCGGCGGGAACTTCATGCACTGGAAGAGAATTTGGCCATCATC > NC_000913/1869075‑1869548 | cGTTCGGTGACTGCCTTCGACAGCGGAGAATCCGTAGCCATTCCCCCGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGTTCTGCGCCACCGCGTGCATCCGGGCAATGACCAGTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGGTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGGGAATGTCAGGATGAATTTGTCTTTCAGATTTCAATAGATGAGTa < 2:205594/251‑1 (MQ=255) gtCGGGGACTGACGTCGACAGCGGCTAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGGGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATGTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGGGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCTAGGCCAGCCAGGATGGTGAAGGTCAGGATGAAGTTGTCTTTCAGATTTCAAAAGATGAGTAt < 2:77797/249‑1 (MQ=255) actgacGTCGACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGAGTTCAAAAGATGAGTATCT‑TGATCt < 1:138827/251‑1 (MQ=255) ttCGACAGCGGCGAATCCGTATCCCTTCCCACGGAAGATATTAGCGAACCGATGTTTCATCCGGGGCGCGGCGGTCTGCGCCACCGAGTGAATACGGGCAATGACCATTTCGGCCAGAACGACCGAATTGAACGTCCCCAGGGTGGAGGCGAAGGATCCGGCAGTGGTCAGGGCCCGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTTTTTCAGATTTCAAAAGCTGAGTATCT‑TGTTCTGCTCtt > 2:40447/2‑251 (MQ=255) cggcgAATCCGTATCCATTCCCACGGAAGATATTAGCGATCCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCAAAAGATGAGTATCt‑t < 2:141637/232‑1 (MQ=255) cggcgAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCAAAAGATGAGTATCt‑t > 1:141637/1‑232 (MQ=255) gcgAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGAGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCAAAAGATGGGAATCT‑TGATCTGCTCTTTGAAGATTTg > 1:314938/1‑251 (MQ=255) agtaTCCGTAGCCATTCCCACGGAAGATATTAGCGAACCGATGGTTCATCAGGGGCGTTGCTGTCTGCGCCTCCGCGTGCATCCGGGCAATGTCCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTTAAGGTCAGGATGAATTTGTCTTTCAGATTTCAAAAGATGAGTATCT‑GGATCTGATCTTTGAAGATTTgg < 2:98634/248‑1 (MQ=255) ccGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTTCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGGTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCAAAAGATGAGTATCT‑TGATCTGCTCTTTGAAGATTTGGCCtt > 1:70936/1‑250 (MQ=255) tCCCACGGAAGATATTAGCGAACCGATGGTTCATCAGGGGCGTGGCGGTCAGCGCCACCGCGTGCATGCGGGCCATGGCAATTTCGGCCAGAACTACCGAATTGAAAGTACCCAAGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCGGGCCATCATGGATTGTGAAGGTCAGGTTGGATTTGTCTTTCAAATTTCAAAAGTTGTGTATCT‑TGATTTGCTCTTTGGAGATTTGGCCTTaaaaaatcta > 2:333392/1‑241 (MQ=255) cGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCAAAAGATGAGTATCT‑TGATCTGCTCTTTGAAGATTTGGCCTTACCGAATCTGAAACAAAACCAACAACGCCAGCTg < 1:249493/251‑1 (MQ=255) atcaGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCAAAAGATGAGTATCT‑TGATCTGCTCTTTGAAGATTTTGCCTTACCGAATCTGAAACAAAACCAACAACGCCAGCTGACCGAatat > 1:171515/1‑251 (MQ=255) ggCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCAAAAGATGAGTATCT‑TGATCTGCTCTTTGAAGATTTGGCCTTACCGAATCTGAAACAAAACCAACAACGCCAGCTGACCGAATATAAAACGCATcg > 1:136930/1‑251 (MQ=255) gcgctacctcttGCATCCGGGCAATGACCATTTCTTCCAGATCGACCGGATGGACCGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTTGTGTGGGCCAGGCCAGCCAGGATTGTGAAGTGCAGGATGAATTTGTCTTTCAGATTTCAAAAGATGATGATCTGTG‑TCTGCTCTTGGAAGATTTGGACTTACCGCATCTGAAACAAAACCAAAAACGTCATCTGACCGAATATAAAACGcctctggctgg < 2:367134/238‑11 (MQ=255) cgcgTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTACGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCAAAAGATGAGTATCT‑TGATCTGCTCTTTGAAGATTTGGCCTTACCGAATCTGAAACAAAACCAACAACGCCAGCTGACCGAATATAAAACGCATCGGGCGGGTTATACCGc > 1:77541/1‑251 (MQ=255) cgTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCAAAAGATGAGTATCT‑TGATCTGCTCTTTGAAGATTTGGCCTTACCGAATCTGAAACAAAACCAACAACGCCAGCTGACCGAATATAAAACGCATCGGGCGGGTTATACCGCTa < 1:381845/251‑1 (MQ=255) gCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGAGAAGGTCAGGATGAATTTGTCTTTCAGATTTCAAAAGATGAGTATCT‑TGATCTGATCTTTGAAGATTTGGCCTTACCGAATCTGAAACAAAACCAACAACGCCAGCTGACCGAATATAAAACGCATCGGGCGGGTTATACCGCTAACGGCGttacg > 1:16244/1‑248 (MQ=255) gACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCAAAAGATGAGTATCT‑TGATCTGCTCTTTGAAGATTTGGCCTTACCGAATCTGAAACAAAACCAACAACGCCAGCTGACCGAATATAAAACGCATCGGGCGGGTTATACCGCTAACGGCGTTCCGGCCaa < 1:230021/251‑1 (MQ=255) aTTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCAAAAGATGAGTATCT‑TGATCTGCTCTTTGAAGATTTGGCCTTACCGAATCTGAAACAAAACCAACAACGCCAGCTGACCGAATATAAAACGCATCGGGCGGGTTATACCGCTAACGGCGTTCCGGCCAATATc > 2:127505/1‑251 (MQ=255) aCGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTGCCGGCAGTGGACAGGGCCCGTCCAGCCAGGACGGTGAGGGTCAGGATGAATTTGTCTTTCAGAGTTCAAAAGATGAGGATCT‑TGATCTGCTCATTGAAGATTTGGCCTTTCCGGATCTGAAACAAAACCAACAACGCCAGCTGTCCGAATATAAAACGAATCGGGCGGGTTATACCGCTAACGGCGTAACGGCCAATATCAGCggtttgagt > 1:235759/1‑243 (MQ=255) aTTGAACGTCCCCAGGGTGGCGGCGGAGGGTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTGCAGATTTCAAAAGATGAGTATCT‑TGATCTGCTCTTTGAAGATTTGGCCTTACCGAATCTGAAACAAAACCAACAACGCCAGCTGACCGAATATAAAACGCATCGGGCGGGTTATACCGCTAACGGCGTTCCGGCCAATATCAGCGTTGTGCGTTCATTGCa < 2:366021/251‑1 (MQ=255) aTTGAACGTCCCCAGGGTGGCCGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGCTGAATTTGTCTTTCAGATTTCAACAGCTGCGTATCT‑TGATCTGCTCTTTGAAGATTTGACCTTACCGCATCTGAACCAAAACCAACCACGCCAGCTGACCGACTATACAACGCATCGGGCGAGTTAAACCGCTAAAGGCGTTCCGGCCAATATCAGCGttaggagttctatgc > 2:396121/1‑237 (MQ=255) cccccAGGGTGGCGGCTGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCAAAAGATGAGTATCT‑TGATCTGCTCTTTGAAGATTTGGCCTTACCGAATCTGAAACAAAACCAACAACGCCAGCTGACCGAATATAAAACGCATCGGGCGGGTTATACCGCTAACGGCGTTCCGGCCAATATCAGCGTTGTGCGTTCATTGCAGAACTCAc < 1:202224/250‑1 (MQ=255) aGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCAAAAGATTAGTATCT‑TGATCTGCTCTTTGAAGATTTGGCCTTACCGAATCTGAAACAAAACCAACAACGCCAGCTGACCGAATATAAAACGCATCGGGCGGGTTATACCGCTAACGGCGTTCCGGCCAATATCAGCGTTGTGCGTTCATTGCAGAACTCACTGGCGCGACGCACAGCCa < 1:377250/251‑1 (MQ=255) ggTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCGTTCAGATTTCAAAAGATGAGTATCT‑TGATCTGCTCTTTGAAGATTTGGCCTTACCGAATCTGAAACAAAACCAACAACGCCAGCTGACCGAATATAAAACGCATCGGGCGGGTTATACCGCTAACGGCGTGCCGGCCAATATCAGCGTTGTGCGTTCATTGCAGAACTCACTGGCGCGACGCACAGCCAt < 1:69469/251‑1 (MQ=255) cAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCAAAAGATGAGTATCT‑TGATCTGCTCTTTGAAGATTTGGCCTTACCGAATCTGAAACAAAACCAACAACGCCAGCTGACCGAATATAAAACGCATCGGGCGGGTTATACCGCTAACGGCGTTCCGGCCAATATCAGCGTTGTGCGTTCATTGCAGAACTCACTGGCGCGACGCACAGCCATGACGGCAGGCAAgcg < 1:219024/251‑1 (MQ=255) ccaggccagCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCAAAAGATGAGTATCT‑TGATCTGCTCTTTGAAGATTTGGCCTTACCGAATCTGAAACAAAACCAACAACGCCAGCTGACCGAATATAAAACGCATCGGGCGGGTTATACCGCTAACGGCGTTCCGGCCAATATCAGCGTTGTGCGTTCATTGCAGAACTCACTGGCGAGACGCACAGCCATGACGGCAGGCAAGCGGCggg < 1:127505/251‑1 (MQ=255) caggccagCCTGGAAGGTGATGGTAAGGATGAATTTGTCATACAAGTTGCAAAAAATGAGTATCT‑TGAACTGCTCTTTGAAGATGGGTTCTTACCGAATCTGAAACAAAACCAACAACGACAGCTGACCGTATATAAAACGCAGCGGGGGGGTTATTGCGCTAACGGCGGTCCGGCCAATATCAGCGTTGTGCGTCCAGTGCGGAACTCACTGGCGCGACGTAATGTCATGGCGGCAGGCTAGCGTCGGGa < 2:211110/251‑1 (MQ=255) ccagGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCAAAAGATGAGTATCT‑TGATCTGCTCTTTGAAGATTTGGCCTTACCGAATCTGAAACAAAACCAACAACGCCAGCTGACCGAATATAAAACGCATCGGGCGGGTTATACCGCTAACGGCGTTCCGGCCAATATCAGCGTTGTGCGTTCATTGCAGAACTCACTGGCGCGACGCACAGCCATGACGGCAGGCAAGCGGCGGGAAcagaacg > 1:23415/1‑245 (MQ=255) ccagGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCAAAAGATGAGTATCT‑TGATCTGCTCTTTGAAGATTTGGCCTTACCGAATCTGAAACAAAACCAACAACGCCAGCTGACCGAATATAAAACGCATCGGGCGGGTTATACCGCTAACGGCGTTCCGGCCAATATCAGCGTTGTGCGTTCATTGCAGAACTCACTGGCGCGACGCACAGCCATGACGGCAGGCAAGCGGCGGGAAc < 2:23415/245‑1 (MQ=255) gAAGGTCAGGATGAATTTGTCTTTCAGATTTCAAAAGATGAGTATCT‑TGATCTGCTCTTTGAAGATTTGGCCTTACCGAATCTGAAACAAAACCAACAACGCCAGCTGACCGAATATAAAACGCATCGGGCGGGTTATACCGCTAACGGCGTTCCGGCCAATATCAGCGTTGTGCGTTCATTGCAGAACTCACTGGCGCGACGCACAGCCATGACGGCAGGCAAGCGGCGGGAACTTCATGCACTGGAag < 1:392834/250‑1 (MQ=255) aaatttgtcttgacaaTTTCCAAAGATGAGTATCT‑TGAGCTGCTCTTTGAAGATTTGGCATTACGGAATCTGAAACAAAACCAACAACGCCAGCTGACCGAATATAAAACGCATCGGGCGGTTTATACCGCTAACGGCGTTCCGTCCAATATCAGCGTTGTGCGGTCATTGCAGAACTGACTGGCGCGACGCACAGCCATGACGGCAGGCAAGCGGCGGTAACGTCATGCACTGGAAGAGAATATGGCcaa < 2:400986/236‑2 (MQ=255) tGTCTTTCAGATTTCAAAAGATGAGTATCT‑TGATCTGCTCTTTGAAGATTTGGCCTTACCGAATCTGAAACAAAACCAACAACGCCAGCTGACCGAATATAAAACGCATCGGGCGGGTTATACCGCTAACGGCGTTCCGGCCAATATCAGCGTTGTGCGTTCATTGCAGAACTCACTGGCGCGACGCACAGCCATGACGGCAGGCAAGCGGCGGGAACTTCATGCACTGGAAGAGAATTTGGCCatcatc > 1:241192/1‑250 (MQ=255) | CGTTCGGTGACTGACGTCGACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCGAAAGATGAGTATCT‑TGATCTGCTCTTTGAAGATTTGGCCTTACCGAATCTGAAACAAAACCAACAACGCCAGCTGACCGAATATAAAACGCATCGGGCGGGTTATACCGCTAACGGCGTTCCGGCCAATATCAGCGTTGTGCGTTCATTGCAGAACTCACTGGCGCGACGCACAGCCATGACGGCAGGCAAGCGGCGGGAACTTCATGCACTGGAAGAGAATTTGGCCATCATC > NC_000913/1869075‑1869548 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |