| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,477,804 | C→T | L62F (CTT→TTT) | ynbA → | CDP‑alcohol phosphatidyltransferase domain‑containing protein YnbA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,477,804 | 0 | C | T | 91.3% | 53.9 / ‑5.7 | 23 | L62F (CTT→TTT) | ynbA | CDP‑alcohol phosphatidyltransferase domain‑containing protein YnbA |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (9/12); minor base G (0/2); total (9/14) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CCGTCAGGGGAATTGATGCACCATAGCGCAAACCGAATTATCAAGGATTGATAATGACGCTCTACCAGATAAAACCGCTCTTTCAGTCGCTGTTAAGGCCGACGATGTTTTGGCTTTATAAGCACCACGTTACAGCGAATCACA‑TCACTCTTGCTGCACTGGCGCTTTCTCTTCTTACCGGATTGCTGTTGATGTTGGCGGCACAACCCATCCTCTTTTTGCTATTGCCCATCGTGCT‑TTTTATCCGTATGGCGCTCAATGCGCTGGATGGCATGTTGGCGCGTGAGTGCAACCAGCAAACACGTCTGGGGGCGATTTTGAATGAGACTGGCGATGTTATTTCCGATATTGCGCTCTATTTACCATTTTTATTTTTACCGGAAAGTAACGCATCACTCGTGATACTCATGTTATTTTGCACCATATTGACCGAGTTTTGCGGTTTACTCGCGCAGACGATTAACGGTGTTCGCAGTTATGC > NC_000913/1477568‑1478048 | ccGTCAGGGGAATTGATGCACCATAGCGCAAACCGAATTATCAAGGATTGATAATGACGCTCTACCAGATAAAACCGCTCTTTCAGTCGCTGTTAAGGCCGACGATGTTTTGGCTTTATAAGCACCACGTTACAGCGAATCACA‑TCACTCTTGCTGCACTGGCGCTTTCTCTTCTTACCGGATTGCTGTTGATGTTGGCGGCACAACCCATCCTCTTTTTGCTATTGCCCATCGTGTT‑TTTTATCCGTATg < 1:185859/251‑1 (MQ=255) gATTGATAATGACGCTCTACCAGATAAAACCGCTCTTTCAGTCGCTGTTAAGGCCGACGATGTTTTGGCTTTATAAGCACCACGTTACAGCGAATCACA‑TCACTCTTGCTGCACTGGCGCTTTCTCTTCTTACCGGATTGCTGTTGATGTTGGCGGCACAACCCATCCTCTTTTTGCTATTGCCCATCGTGTT‑TTTTATCCGTATGGCGCTCAATGAGCTGGATGGCATGTTGGCGCGTGAGTGCAAcagg > 1:273184/1‑248 (MQ=255) gATAATGACGCTCTACCAGATAAAACCGCTCTTTCAGTCGCTGTTAAGGCCGACGATGTTTTGGCTTTATAAGCACCACGTTACAGCGAATCACA‑TCACTCTTGCTGCACTGGCGCTTTCTCTTCTTACCGGATTGCTGTTGATGTTGGCGGCACAACCCATCCTCTTTTTGCTATTGCCCATCGTGTT‑TTTTATCCGTATGGCGCTCAATGCGCTGGATGGCATGTTGGCGCGTGAGTGCAACCAGCaa > 1:305409/1‑250 (MQ=255) aGATAAAACCGCTCTTTCAGTCGCTGTTAAGGCCGACGATGTTTTGGCTTTATAAGCACCACGTTACAGCGAATCACA‑TCACTCTTGCTGCACTGGCGCTTTCTCTTCTTACCGGATTGCTGTTGATGTTGGCGGCACAACCCATCCTCTTTTTGCTATTGCCCATCGTGTT‑TTTTATCCGTATGGCGCTCAATGCGCTGGATGGCATGTTGGCGCGTGAGTGCAACCAGCAAACACGTCTGGGGGCGAtt > 1:244293/1‑251 (MQ=255) atccGCTCTATCAGTCGCTGTTAAGGCCGACGATGTGTTGGCTTTATAAGCTCCACGTGACAGCGAATCACA‑TCACTCTTGCTGCACTGTCTCTTTCTCTTCTTACTGGATTGCTGGTGATGTTGGTGGCACAACCCATCCTCTATTTGCTATTGCCCATCGTGTG‑TTTTATCCGTATGGCGCTCAATGCGCTGGATGGCATGTTGGCGCGTGAGTGCAACCAGCAAACACGTCTGGGGGCGATTTTGAAt < 2:244293/249‑1 (MQ=255) cagacGCTGTTAAGGCCGACGATGTTTTGGCTTTATAAGCCCCACGTTACAGCGAATCACA‑TCACTCTTGCTGCACTGGCGCTTTCGCTGCTTACCGGATTGCTGTTGATGTTGGCGGCACAACCCATCCTCTTTTTGCTATTGCCCATCGTGTT‑TTTTATCCGTATGGCGCTCAATGCGCTGGATGTCATGTTGGCGCGTGAGTGCAACTAGCAAACACGTCTGGGGGCGATTTTGAATGAGACTGGCg < 2:260741/246‑1 (MQ=255) aaGGCCGACGATGTTTTGGCTTTATAAGCACTACGTTTCAGCGAATCACA‑TCTCTCTTGCTGCACGGGCGCTTTCTCTTCTTACCGGATTGCTGTTGAGGTTGGCGTCACAACCCATCCTCTTGTTGCTATTGCCCATCGTGGT‑TTTTATCCGTATGGCGCTCAATGCGCTGGATGGTATGTTGGCGCGTGAGTGCAACCAGCAAACACGTCTGGGGGCGAGTTTGAATGAGACTGTCGATGTTATTTcc < 2:283901/250‑1 (MQ=255) ttATAAGCACCACGTTACAGCGAATCACA‑TCACTCTTGCTGCACTGGCGCTTTCTCTTCTTACCGGATTGCTGTTGATGTTGGCGGCACAACCCATCCTCTTTTTGCTATTGCCCATCGTGTT‑TTTTTTCCGTATGGCGCTCAATGCGCTGGATGGCATGTTGGCGCGTGAGTGCAACCAGCAAACACGTCTGGGGGCGATTTTGAATGAGACTGGCGATGTTATTTCCGATATTGCGCTCTATTTAcc < 1:88720/249‑1 (MQ=255) taAGCACCACGTTACAGCGAATCACA‑TCACTCTTGCTGCACTGGCGCTTTCTCTTCTTACCGGATTGCTGTTGATGTTGGCGGCACAACCCATCCTCTTTTTGCTATTGCCCATCGTGTT‑TTTTATCCGTATGGCGCTCAATGCGCTGGATGGCATGTTGGCGCGTGAGTGCAACCAGCAAACACGTCTGGGGGCGATTTTGAATGAGCCTGGCGATGTTATTTCCGATATTGCGCTCTATTTACCatttt > 1:450391/1‑251 (MQ=255) aaGCACCACGTTACAGCGAATCACAATC‑CTCTTGCTGCACTGGCGCTTTCTCTTCTTATCGGATTGCTGTTGATGTTGGCGGCACAACCCATCCTCGTTTTGCTATTGCCCATCTTGTT‑TTTTATCCGTATGGCGCTCAATGCGCTGGATGGCATGTTGGCGCGTGAGTGCAACCAGCAAACACGTCTGTGGGCGATTTTGAATGAGACTGGCGATGTTATTTCCGATATTGCGCTCTAttt < 2:213391/242‑1 (MQ=255) aaGCACCACGTTACAGCGAATCACA‑TCACTCTTGCTGCACTGGCGCTTTCTCTTCTTACCGGATTGCTGTTGATGTTGGCGGCACAACCCATCCTCTTTTTGCTATTGCCCATCGTGTT‑TTTTATCCGTATGGCGCTCAATGCGCTGGATGGCATGTTGGCGCGTGAGTGCAACCAGCAAACACGTCTGGGGGCGATTTTGAATGAGACTGGCGATGTTATTTCCGATATTGCGCTCTAttt > 1:213391/1‑242 (MQ=255) aaGCACCACGTTACAGCGAATCACA‑TCACTCTTGCTGCACTGGCGCTTTCTCTTCTTACCGGATTGCTGTTGATGTTGGCGGCACAACCCATCCTCTTTTTGCTATTGCCCATCGTGTT‑TTTTATCCGTATGGCGCTCAATGCGCTGGATGGCATGTTGGCGCGTGAGTGCAACCAGCAAACACGTCTGGGGGCGATTTTGAATGAGACTGGCGATGTTATTTCCGATATTGCGCTCTATTTACCattttt > 1:273498/1‑251 (MQ=255) cacGTTACATCGAAGCACA‑TCCTTCTTGATGCACTTGCGCTTTCTCTACTTACCGGATTGCTGTTGATTTTGGCGGCACAACCCATTCTCTTTTTTCTTTTGCCCATCGTGTT‑TTTTAGACGTATGGCGCTCAATGCGCTGGATGGCATGTTGGCGCGTGAGTGCAACTAGCAATCACGTCTGGGGGCGATTTTGAATGAGACTGGCGATGTTATTTCCGATATTGCGCTCTATTTTCCatttttattttt < 2:288654/251‑1 (MQ=255) atcaca‑tcacTCTTGCTGCACTGGCGCTTTCTCTTCTTACCGGATTGCTGTTGATGTTGGCGGCACAACCCATCCTCTTTTTGCTATTGCCCATCGTGTT‑TTTTATCCGTATGGCGCTCAATGCGCTGGATGGCATGTTGGCGCGTGAGTGCAACCAGCAAACACGTCTGGGGGCGATTTTGAATGAGACTGGCGATGTTATTTCCGATATTGCGCTCTATTTACCATTTTTATTTTTACCGGAAAGTAAc < 1:137915/251‑1 (MQ=255) tcaca‑tcacTCTTGCTGCACTGGCGCTTTCTCTTCTTACCGGATTGCTGTTGATGTTGGCGGCACAACCCATCCTCTTTTTGCTATTGCCCATCGTGTT‑TTTTATCCGTATGGCGCTCAATGCGCTGGATGGCATGTTGGCGCGTGAGTGCAACCAGCAAACACGTCTGGGGGCGATTTTGAATGAGACTGGCGATGTTATTTCCGATATTGCGCTCTATTTACCATTTTTATTTTTACCGGAAAGTAACg > 1:177620/1‑251 (MQ=255) ggttggcttgtgatgggggcggcACAAGCCATCCTCTTTGTGCTATGGCACAT‑ATGGTGTTTTAACCGTATGGCTCTCAATGTGTTGGATGGCATGGTTGCGCGTGAGTGCATCCAGCAAACACGTCTGGGTGCGATTTTGAATGAGACTGGCGATGTTAGTTCCGATATTGCGCTCTATTTACCATTGTTATTTTTACCGGAATGTAACGCATCCCTCGGGATACTCATGTTATTTTGCACCATATTGAc < 2:163911/234‑1 (MQ=255) gCTGTTGATGTTGGCGGCACAACCCATCCTCTTTTTGCTATTGCCCATCGTGTT‑TTTTATCCGTATGGCGCTCAATGCGCTGGATGGCATGTTGGCGCGTGAGTGCAACCAGCAAACACGTCTGGGGGCGATTTTGAATGAGACTGGCGATGTTATTTCCGATATTGCGCTCTATTTACCATTTTTATTTTTACCGGAAAGTAACGCATCACTCGTGATACTCATGTTATTTTGCACCATATTGACCGAGt < 1:244073/251‑1 (MQ=255) gTTGGCGGCACAACCCATCCTCTTTTTGCTATTGCCCATCGTGTT‑TTTTATCCGTATGGCGCTCAATGCGCTGGATGGCATGTTGGCGCGTGAGTGCAACCAGCAAACACGTCTGGGGGCGATTTTGAATGAGACTGGCGATGTTATTTCCGATATTGCGCTCTATTTACCATTTTTATTTTTACCGGAAAGTAACGCATCACTCGTGATACTCATGTTATTTTGCACCATATTGACCGAGTTTTGCGGtt > 1:115644/1‑251 (MQ=255) ggcACAACCCATCCTCTTTTTGCTATTGCCCATCGTGTT‑TTTTATCCGTATGGCGCTCAATGCGCTGGATGGCATGTTGGCGCGTGAGTGCAACCAGCAATCACGTCTGGGGGCGATTTTGAATGAGACTGGCGATGTTATTTCCGATATTGCGCTCTATTTACCATTTTTCTTTTTACCGGAAAGTAACTCATCACTCTTTTTACTCTTTTTTTTTTGCACCTTAtttcccgtttttttcggtttgctcc > 2:131069/1‑228 (MQ=255) cccATCCTCTTGTTGCTATGTCTCATCGTGTT‑GTTTATCCGTATGGCGCTTAATGCGCTGGATGGCATGTTGGCGAGTGAGTGCAACCAGCAAACACGTCTGGGGGCGATTTTTAATGAGACTGGCGATGTGATTTCCGATATTGCGCTCTATTTTCCATTTTTATTTTTACCGGAAAGTAACGCATCACTCGTGATACTCATGTTATTTTGCACCATATTTACCGAGTTTTGCGGTTTACTCGCGCAGAc < 2:169509/251‑1 (MQ=255) ttttGCTATTGCCCATCGTGTT‑TTTTATCCGTATGGCGCTCAATGCGCTGGATGGCATGTTGGCGCGTGAGTGCAACCAGCAAACACGTCTGGGGGCGATTTTGAATGAGACTGGCGATGTTATTTCCGATATTGCGCTCTATTTACCATTTTTATTTTTACCGGAAAGTAACGCATCACTCGTGATACTCATGTTATTTTGCACCATATTGACCGAGTTTTGCGGTTTACTCGCGCAGACGATTAACg < 2:273498/249‑1 (MQ=255) gCCCATCGTGTT‑TTTTATCCGTATGGCGCTCAATGCGCTGGATGGCATGTTGGCGCGTGAGTGCAACCAGCAAACACGTCTGGGGGCGATTTTGAATGAGACTGGCGATGTTATTTCCGATATTGCGCTCTATTTACCATTTTTATTTTTACCGGAAAGTAACGCATCACTCGTGATACTCATGTTATTTTGCACCATATTGACCGAGTTTTGCGGTTTACTCGCGCAGACGATTAACGGTGTTCGCAGt < 1:47381/250‑1 (MQ=255) aTCGTGTT‑TTTTATCCGTATGGCGCTCAATGCGCTGGATGGCATGTTGGCGCGTGAGTGCAACCAGCAAACACGTCTGGGGGCGATTTTGAATGAGACTGGCGATGTTATTTCCGATATTGCGCTCTATTTACCATTTTTATTTTTACCGGAAAGTAACGCATCACTCGTGATACTCATGTTATTTTGCACCATATTGACCGAGTTTTGCGGTTTACTCGCGCAGACGATTAACGGTGTTCGCAGTTATGc < 2:305409/251‑1 (MQ=255) | CCGTCAGGGGAATTGATGCACCATAGCGCAAACCGAATTATCAAGGATTGATAATGACGCTCTACCAGATAAAACCGCTCTTTCAGTCGCTGTTAAGGCCGACGATGTTTTGGCTTTATAAGCACCACGTTACAGCGAATCACA‑TCACTCTTGCTGCACTGGCGCTTTCTCTTCTTACCGGATTGCTGTTGATGTTGGCGGCACAACCCATCCTCTTTTTGCTATTGCCCATCGTGCT‑TTTTATCCGTATGGCGCTCAATGCGCTGGATGGCATGTTGGCGCGTGAGTGCAACCAGCAAACACGTCTGGGGGCGATTTTGAATGAGACTGGCGATGTTATTTCCGATATTGCGCTCTATTTACCATTTTTATTTTTACCGGAAAGTAACGCATCACTCGTGATACTCATGTTATTTTGCACCATATTGACCGAGTTTTGCGGTTTACTCGCGCAGACGATTAACGGTGTTCGCAGTTATGC > NC_000913/1477568‑1478048 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |