| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 2,317,225 | IS2 (–) +5 bp | coding (2648‑2652/2850 nt) | rcsC ← | histidine kinase RcsC |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1651548 | NA (NA) | 41 (1.130) | 37/488 | 0.1 | 93.0% | noncoding (706/706 nt) | IS2 | repeat region |
| ? | NC_000913 | = 2317229 | 3 (0.080) | coding (2648/2850 nt) | rcsC | histidine kinase RcsC | |||||
| * | ? | NC_000913 | 2317225 = | 3 (0.080) | 37 (1.020) | 34/488 | 0.2 | 92.3% | coding (2652/2850 nt) | rcsC | histidine kinase RcsC |
| ? | NC_000913 | = 2997691 | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
GGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTG‑ATAGCCCAACGATCCCAACTGATCTGCCAGCAAACGCCGGTTAATCGGATGATCATCCACGACCAGAATCATCATATCGTCATTATCGCTGACCGCTTTGTCCGTTGACGGCAGAGCGTTAGCAGGATCGTCGCTCTCCA > NC_000913/2316981‑2317469 | ggCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAAc < 1:371729/249‑1 (MQ=255) ttacgccagagaaataactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAAccat < 1:95222‑M1/8‑1 (MQ=255) ttacgccagagaaataactggctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAAccat < 1:156169‑M1/8‑1 (MQ=255) aTTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCGTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACtgaat < 1:192614‑M2/251‑6 (MQ=255) aaggccgGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACtggatttgcccctat > 2:3195‑M2/4‑236 (MQ=255) gctggctgctacaccatgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAACCATCCATATTTGGCATGTTGACg < 2:359058‑M1/28‑1 (MQ=255) aaaCGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACtggatttgcccctatattcaatcggaagagcg < 2:28983‑M2/251‑33 (MQ=255) aaaCGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACtggatttgcccctatatt > 1:28983‑M2/1‑219 (MQ=255) acaccatgttgccgggcaacgaaggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAACCATCCATATTTGGCATGTTGACGTCGCTAAg > 1:355266‑M1/214‑249 (MQ=255) cGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGGCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCAGATTACCGGCAACGACAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACtggagttgcccctatatttacagacatctgttatc < 1:48270‑M2/251‑36 (MQ=255) aTCCTTCCTACGAACCCCGCTATTTCCTGACCCGCCCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCATGCGGTAACtggatttgcccctatatttccagacatctgttatcacttaa > 2:309604‑M2/1‑210 (MQ=255) aTCCGTCCTACGAGTCCCGCGATTTCCTGACCCTCTCGGCATCTAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCACCCACCGCATTAGCAGTTACTCCGATTAACGGCAACGTCAGTCC‑AACTGAAGAATGCGTTGCGTCAAGCGGTTACCATACATCTTTGGCCTGTTGACGTCGCTAAGCACGAGATCa > 2:219555/1‑250 (MQ=255) ggcaacgaggtagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatttgttctctaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAACCATCCATATTTGGCATGTTGACGTCGCGAAGCACGATATCAATATGa > 1:254390‑M1/200‑251 (MQ=255) ggcaacgaggaagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcactcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAACCATCCATATTTAGCATGTTGACGTCGCTAAGCACGATATCCATAtgt < 2:193245‑M1/52‑2 (MQ=255) ggtataccgcgattTCCGGACCCTCTCGGCTTATAACGTCAGCTTCTTTTTTTGCACATCCAGCGATACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGATGCATCTCTTCAGCCAACGAATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACtggatttgcccctatatttccagacctcggttatcatttatcccatttcaa > 2:90383‑M2/7‑200 (MQ=255) gAACCCCGCGATTGCCTGACCCTCTCGTCATATAACGTCAGCGTCTGTGTTAGCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCCCAACTGACGAATGCTTTGCGTCAAGCGGTAACtggatttgcccctatattgccagacatctgttatcacttaacccattacaag > 2:11239‑M2/1‑199 (MQ=255) aTCCCGCGATTTCCTGATCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcc > 1:429316‑M2/1‑197 (MQ=255) aTCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcc < 2:316733‑M2/251‑55 (MQ=255) cgcgATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgct > 1:316733‑M2/1‑193 (MQ=255) accgacatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAACAATCCATATTTGGCATGTTGACGTCGCTAACCACGATATCAATATAATTCttgctcagt < 2:379479‑M1/64‑5 (MQ=255) catccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTa > 1:187686‑M1/182‑251 (MQ=255) cccggttcaaagctctgcttaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAgcg > 2:185970‑M1/178‑251 (MQ=255) ctcGGCATATACCGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAAAtggctttgcccctatatttccagacatctgttatcacttaaccccttacaagcccccttccgcagatattcccgg < 2:305479‑M2/251‑76 (MQ=255) ggCATATAACGTCAGCGTCTGTTTTATAACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggc > 1:224583‑M2/1‑173 (MQ=255) ctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTc < 1:318380‑M1/91‑1 (MQ=255) tCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATGCCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacc < 1:342386‑M2/251‑90 (MQ=255) cAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTAACGGCAACGTCAGTCC‑AACTGACGAATGCGTTGCGTCAAGCGGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGt < 1:219555/251‑1 (MQ=255) aattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGtt < 2:297120‑M1/97‑1 (MQ=255) ttgcgatcttttcctgtgttgtacgccgtcagcgtttctccggccctaagacatcaatcatctgttctccaatgtctagtctaaaaactagtattaagactatcacttatttaagtgatatgggttgtctggagattcagggggccagtctaGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGttt > 2:92928‑M1/153‑250 (MQ=255) tcgatcttttcctggttggtacgccgtctgcgtttctccggccctaagacatcaatcagctgttctccaatgactaggctaaaaactagtattaagactatcacttatttaagttatattggttgtctggagattcagggggccagtctaGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTa > 2:318380‑M1/151‑250 (MQ=255) gcgatctgttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTAc > 1:452722‑M1/151‑251 (MQ=255) tATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATCCCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCACCGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACtggatttgcccctatatttccagacctctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgcgcgataacccagcgcactatgc < 2:429517‑M2/251‑103 (MQ=255) tttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAGCCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTG‑At > 1:451120‑M1/144‑250 (MQ=255) aTCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGCTTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcg < 1:202446‑M2/251‑104 (MQ=255) ttACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgtt < 1:28269‑M2/251‑117 (MQ=255) ttACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgtt < 1:308578‑M2/251‑117 (MQ=255) aCCGGCTTCGACAGGCAGCTGTCCATACCGGTCTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACtggatttgcccctctatttcacgcaatctgttatcacttaacccattacaagcccgctgccgcagataatcccgtggcgcgcgataacccagcgcactatgcgggtgccactctatct < 2:80537‑M2/251‑119 (MQ=255) ccGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttata > 1:132053‑M2/1‑132 (MQ=255) cGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCACAACTGACGAATGCGTTGCGTCAAGCGGTAACtggatttgcccctatatttccagacatctgttctcacttaacccattacaagcccgctgccgcagatattcccgtgacgagcgataacccagcgcactatgcggatgccattcgttataatgctcg < 1:425325‑M2/251‑127 (MQ=255) cAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaac > 1:150939‑M2/1‑122 (MQ=255) ggCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgc < 1:58524‑M2/251‑132 (MQ=255) ctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAACCATTCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACAtt > 2:63997‑M1/116‑219 (MQ=255) ctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACAtt < 1:63997‑M1/104‑1 (MQ=255) tccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCAACGACGCCATCATTAGCGGTTTTACATTT‑ATAGCCCAACGATCCAAACTGATCTACCAGc < 2:274818‑M1/136‑1 (MQ=255) ccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtcttaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTG‑ATAGCCCAACGATCCCAACTGATCTGCCAGCa < 1:187194‑M1/137‑1 (MQ=255) gTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCCCAACTGACGAACGCGTTGCGTCAAGCGGTAACtggatttgcccctatatttccagacatctgttatctcttaacccattacaagccctctgccgcagatattcccgttgcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctg > 1:18194‑M2/1‑113 (MQ=255) atcaatcatctgttctccaatgactagtctaacaactagtattcagaatatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGCTATCAATATGATTCTTGCTAAGTACATTACGCGCATCGACGCCATCATTCGCGGTTTTACATTGTAT‑GCCCAACGATCCCAACTGATCTGCCAGCAATCGCCGGTTAATc < 2:43957‑M1/151‑1 (MQ=255) cTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgatcacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgct < 2:454067‑M2/251‑151 (MQ=255) cTCCAGACACCGCTGCTTATCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCACCGTCAGTCCCCACTGACGAATGCGTTGCGTCAAGCGGTAACtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcacgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctccgcaagggtctttgct < 2:408064‑M2/251‑151 (MQ=255) ctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTG‑ATAGCCCAACGATCCCAACTGATCTGCCAGCAAACGCCGGTTAATCGGATGatc < 1:314137‑M1/159‑1 (MQ=255) tccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTG‑ATAGCCCAACGATCCCAACTGATCTGCCAGCAAACGCCGGTTAATCGGATGATCATCCACg < 1:349517‑M1/166‑1 (MQ=255) ccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAACCATACATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTG‑ATAGCCCAACGATCCCAACTGATCTGCCAGCAAACGCCGGTTAATCGGATGATCATCCa > 1:425286‑M1/85‑248 (MQ=255) gctTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccg > 1:408064‑M2/1‑87 (MQ=255) actagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTcgc < 1:72696‑M1/93‑1 (MQ=255) actagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTcgc > 2:72696‑M1/79‑171 (MQ=255) actagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTG‑ATAGCCCAACGATCCCAACTGATCTGCCAGCAAACGCCGGTTAATCGgatgatcatccccgccaaga < 2:212974‑M1/172‑10 (MQ=255) ctagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGACATCATTCGCGGTTTTACATTG‑ATAGCCCAACGATCCCAACTGATCTGCAAGCAAACGCCGGTTAATCGGATGATCATCCACGCCCAGAat < 2:383907‑M1/174‑1 (MQ=255) tCAGCCAACGCATTTGCAGTTACTCCGTTGACCGGCAACGTTAGTCCCAACCGACTAAGGCGTTGCGTCAAGCGTTAACtggatttgcccctatatttccagacatctgttagcacttaacccatgacaatcccgctgccgcagatattcccgtggcgagcgataacccagcgctctatgcggatgccattcgttataatgctcgaacgcctctgcaaggttttgtgctgccgttaacccgtctggtt > 2:26760‑M2/1‑79 (MQ=255) tCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttg > 1:166784‑M2/1‑79 (MQ=255) ctacATTAGCAGTTACTCTGAAAACCGGCAACGTCAGACCCAACTGAAGAATGCGTTGCGTCAAGCTAAAACCACCCATATTTAGCATGTTGACGTCGCTAAGCACGAAATCATTATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTAGCGGTATTACATTG‑ATAGACCACCGATTCGAACAGATCTGCCAGCAAACGCCGGTTAATCGGATGatcatcaaagcccaaaataaccatatcg > 2:434200/4‑229 (MQ=255) aactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTG‑ATAGCCCAACGATCCCAACTGATCTGCCAGCAAACGCCGGTTAATCGGATGATCATCCACGACCAGAATCATCATATCg > 1:383907‑M1/68‑251 (MQ=255) cAGTTACTCCGATTAACGGCAACGTCAGTCCCAACTGACGAATGAGTTGCGTCAAGCGGTAACtggattggcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatagggatgccattcgttatcatgctcgaacgcctctgcatggttctttgctgccgttaccccgactggtttgggctggcacctgtttg < 2:217615‑M2/250‑188 (MQ=255) aagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTG‑ATAGCCCAACGATCCCAACTGATCTGCCAGCAAACGCCGGTTAATCGGATGATCATCCACGACCAGAATCATCATATCGTCATTATCg > 1:297120‑M1/58‑250 (MQ=255) tCCGATTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgc < 1:114812‑M2/251‑196 (MQ=255) gATTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgcttt > 1:416424‑M2/1‑53 (MQ=255) atttaagtgatattggttgtctggagattcagggggccagtctaGTAACCATCCATATTTGGCATGTTGATGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTG‑ATAGCCCAACGATCCCAACTGATCTGCCAGCAAACGCCGGTTAATCGGATGATCATCCACGACCAGAATCATCATATCGTCATTATCGCTGACCGCTTTGTc < 1:117198‑M1/207‑1 (MQ=255) ttaagtgatattggatgtctggagattcagggggccagtctaGAAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGATAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTG‑ATAGCCCAACGATCCCAACTGATCTGCCAGCAAACGCCGGTTAATCGGATGATCATCCCCGACCAGAATCATAATATAGTCATTATCGCTGACCGCTTTGTCCg < 2:315072‑M1/209‑1 (MQ=255) cGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggctctttgctgccgttaacccgtctggtttgggcatgatactgatttagtcacgctttatcgtt > 1:82608‑M2/1‑47 (MQ=255) gCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgtttt > 1:119966‑M2/1‑45 (MQ=255) ccACCTGACGAATGCGTTGCGTCAAGCGGTAACtgtatttacccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagagataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgctgtagtcacgctttatcgttttcacgaagctatc < 1:398747‑M2/251‑219 (MQ=255) tgtctggagattcagggggccagtctaGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTG‑ATAGCCCAACGATCCCAACTGATCTGCCAGCAAACGCCGGTTAATCGGATGATCATCCACGACCAGAATCATCATATCGTCATTATCGCTGACCGCTTTGTCCGTTGACGGCAGAGCGt < 1:275677‑M1/224‑1 (MQ=255) cAACTGACGAATGCGTTGCGTCAAGCTGTAACtggatttgcccctatatttccagacatcttttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggttttggcatgatactgatgtattcacgctttatcgttttcacgaagctctct > 1:81062‑M2/1‑32 (MQ=255) tggagattcagggggccagtctaGTAACCATCCATATTTGGCATGTTGACGTCGCTCAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGACATCATTCACGGTTTTACATTG‑ATAGCCCAACGCTCCCAACTGATCTGCCAGCAAACGCCGGTTAATCGGATGATCAGCCACGACCAGACTCATCATATCGTAATAATCGCTaatcgctttgtccgttgcagtcaaagcttttgc < 2:215493‑M1/228‑17 (MQ=255) ggagattcagggggccagtctaGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTG‑ATAGCCCAACGATCCCAACTGATCTGCCAGCAAACGCCGGTTAATCGGATGATCATCCACGACCAGAATCATCATATCGTCATTATCGCTGACCGCTTTGTCCGTTGACGGCAGAGCGTTAg > 1:193245‑M1/23‑249 (MQ=255) gAATGCGTTGCGTCAAGCGGTAACtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgcctggtttgggcatgatactgatgtagtcacgatttatcgttttcacgacgctctctgctcttcc < 2:120582‑M2/251‑228 (MQ=255) aTGCGTTGCGTCAAGCGGTAACtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtctcgctttatcgttttcacgaagctctctgctattccgt > 1:151104‑M2/1‑22 (MQ=255) ccagtctaGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTG‑ATAGCCCAACGATCCCAACTGATCTGCCAGCAAACGCCGGTTAATCGGATGATCATCCACGACCAGAATCATCATATCGTCATTATCGCTGACCGCTTTGTCCGTTGACGGCAGAGCGTTAGCAGGATCGTCGCtctc < 1:303915‑M1/243‑1 (MQ=255) ccagtctaGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTG‑ATAGCCCAACGATCCCAACTGATCTGCCAGCAAACGCCGGTTAATCGGATGATCATCCACGACCAGAATCATCATATCGTCATTATCGCTGACCGCTTTGTCCGTTGACGGCAGAGCGTTAGCAGGATCGTCGCtctc < 1:408863‑M1/243‑1 (MQ=255) cAAGCGGTAACttgattttcccctatatttccagacatctgttatcacgtaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtctcgctttatcgttttcacgaagctctctgctattccgtttctctcctga > 2:380882‑M2/1‑11 (MQ=255) agtctaGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCAGCATTCGCGGTTTTACATTG‑ATATCCCAACGATCCCAACTGATCTGCCAGCAAACGCCGGTTAATCGGATGATCATCCACGACCAGAATCATCATATCGTCAGTATCGCCGACCGCTTTGTCCGTTGGCGGCAGAGCGTTAGCAGGATCGTCGCTCTCCa > 1:364430‑M1/7‑251 (MQ=255) aGCGGTAACtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggttt > 1:336630‑M2/1‑9 (MQ=255) aGCGGTAACtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggttt < 2:336630‑M2/179‑171 (MQ=255) | GGCATTTGCACTGAATGCCGGATGCGGCGTAAACGCCTTATCCGTCCTACGAATCCCGCGATTTCCTGACCCTCTCGGCATATAACGTCAGCGTCTGTTTTATCACATCCAGCGTTACCGGCTTCGACAGGCAGCTGTCCATACCGGACTCCAGACACCGCTGCTTCTCTTCAGCCAACGCATTAGCAGTTACTCCGATTACCGGCAACGTCAGTCCCAACTGACGAATGCGTTGCGTCAAGCGGTAACCATCCATATTTGGCATGTTGACGTCGCTAAGCACGATATCAATATGATTCTTGCTAAGTACATTAAGCGCATCGACGCCATCATTCGCGGTTTTACATTG‑ATAGCCCAACGATCCCAACTGATCTGCCAGCAAACGCCGGTTAATCGGATGATCATCCACGACCAGAATCATCATATCGTCATTATCGCTGACCGCTTTGTCCGTTGACGGCAGAGCGTTAGCAGGATCGTCGCTCTCCA > NC_000913/2316981‑2317469 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |