| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 585,707 | IS2 (+) +5 bp | intergenic (‑74/+436) | ompT ← / ← envY | omptin family outer membrane protease OmpT/DNA‑binding transcriptional activator EnvY |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 585707 = | 2 (0.060) | 37 (1.020) | 32/488 | 0.2 | 94.8% | intergenic (‑74/+440) | ompT/envY | omptin family outer membrane protease OmpT/DNA‑binding transcriptional activator EnvY |
| ? | NC_000913 | 1467910 = | NA (NA) | noncoding (1331/1331 nt) | IS2 | repeat region | |||||
| * | ? | NC_000913 | = 585711 | 2 (0.060) | 27 (0.740) | 26/486 | 0.4 | 93.0% | intergenic (‑78/+436) | ompT/envY | omptin family outer membrane protease OmpT/DNA‑binding transcriptional activator EnvY |
| ? | NC_000913 | = 1469240 | NA (NA) | noncoding (1/1331 nt) | IS2 | repeat region | |||||
GAAATAACTGGCTGGCTGCTACACCATGTTGCCGGGCAACGAGGGAGACCGTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCTGGGTTCAAAACCCGGAACGATCTTCACTATGT > NC_000913/1469008‑1469478 | gaAATAACTGGCTGGCTGCTACACCATGTTGCCGGGCAACGAGGGAGACCGTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGCTTCAGTGGGCCAGTCTAAACCCCAGAacttacttt > 2:161632/1‑250 (MQ=25) tAACAGGCTGGCTGCTACACCATGTTGCCGGGCAACGAGGGAGACCGTCATCCCCGGTTCAAAGCTCTGCTGAAAAATTACGATCGTTTCCTGTGTGGTACGCCGGCTGCGATTCTCCGGCAATAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATAACTTATTTAAGTGATCTTGGATGTCTGGAGATTGAGGGGGCCAGTCTACACCCAAGAACTTACTAATGCt > 2:246106/1‑251 (MQ=11) gcggttactccATGTTGCCTGGCAGCGAGGGAGGTCCTCGTCGCCGGGTAAAAGCGCTGCTGAACAATTGCGATCATTTCCTGTGAGGTACGCCGTCTGCTTTTCTCCGGCCCTAAGACATCAATTAGCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGAGTATCATTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAACCCCCAGAACTTTCATATGCTGATTCCGGTg < 2:179463/242‑1 (MQ=11) tgctACACCATGTTGCCGGGCAACGAGGGAGACCGTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCg > 1:396175/1‑251 (MQ=255) gctATACCATTTTGCCGGGAAACGAGGGAGACCGTCATCCTCGGTTCAAAGCTCTGCTGAACAATTGCTATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCg < 1:413314/250‑1 (MQ=255) cccATGTTGCCGGGCAACGAGGGAGACCGTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAAtt < 1:160733/250‑1 (MQ=255) cATGTTGCCGGGCAACGAGGGAGACCGTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGt > 1:323885/1‑251 (MQ=255) cGAGGGAGACCGTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTg < 1:270431/251‑1 (MQ=255) gTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTGTCCTGTGTTGTACGCCGTCTGCGGTTCTCCGGCCCTAAGACATCAATCATCTGTTCTACAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAATTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAAtt < 1:290760/251‑1 (MQ=255) cctgTTCAAAGCTCTTCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTGGTCTGGAGATTCAGGGTTCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAAc < 1:27510/248‑1 (MQ=255) ggTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGc > 1:327208/1‑251 (MQ=255) cAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAAc < 1:401499/250‑1 (MQ=255) ctctGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTAt > 1:81220/1‑251 (MQ=255) ctgctgAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTGAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAactta > 1:17124/1‑177 (MQ=37) tgctgAACAATCTCGATCTTGTCCTGTGTGGTACGCCGTCGGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTAtgt < 1:195083/250‑1 (MQ=255) tGCGATCGTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCCATCATCTGTGCTCCAAGGACTAGTCTAAAAACTAGTATTAAGACTATCACTGATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGTCAGTCTAAACACCAGAACGGACTGATGCTGAATCCGGTGCTAAAACTTTTAATAAAGGTACTTGGATATTCAATTGGGCAACGCAACAGTTATGAGAGAACATgga < 2:45818/250‑2 (MQ=17) ttgccTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCgg < 1:415761/246‑1 (MQ=255) gttcTGTGGGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTAGTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTGAATTGGTTAACGCAACAGTAATGTGAAAACATGGTGTTGCGGAg < 2:25669/247‑1 (MQ=21) ccTGTGTGGTACGCCGTCTGCGTTTCTCCGGACCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGtt < 2:100693/251‑1 (MQ=255) tgtgGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGtttttt > 1:102496/1‑251 (MQ=255) aCGCCGCCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGATCTCCAATGACTAATCTAAAAACTAGTATTAAGACTATCACTTATGTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTGTTTTGAATga < 2:102496/251‑1 (MQ=255) gagTTTCTCCGGCCATAAGAAATCAATCATCTGTTCTCCAATGACTAGTCTACAAACTAGTATTAAGACTATCACTTATTTAAATGATATTGGTTGACTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGATGAGAAAATTGTTAATAAAGGTACTAGTAGTTTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGaaaa > 2:454191/3‑248 (MQ=38) gTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGa < 1:210406/250‑1 (MQ=255) aaaaCTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACATCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACTGAACAgg < 2:87968/251‑1 (MQ=255) aaGACTATCACTTATTTAAGGGATAGTGTTTGTCTGGCGATTCAGGGGGCCAGTCTAAACCACAGAACTTATTTATGATGATTAAGGTGCGAAAATTGTTAATACAGGTACTTGTAGATTCAGATGGTCAACGCAACAGATATGTGAAAACATGGGGGTGCGGAGGTGTTTTGAATGAGCAGAAAATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAAt > 2:33129/1‑251 (MQ=18) aTCACTTAGTTAAGTGATAATGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAATTTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCg < 1:87716/249‑1 (MQ=255) caattacttAAGTGATATTGGTTGTCTGGAGATTCAGCGGGCCAGTCTTAACACCAGAACTTACTTATGCTGATTCCGGAGCGAAAATTGTTAATAAATGTATTTGTAGATTCAATTTGTCAACGCAACAGTTATGTGAAAACATTGGGTTGCGGATGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAAAGGAACAGGCTTCAGTGAAATAGCGAata < 2:349501/244‑1 (MQ=18) gTGATATTGGGTGTGGGGAGATTTAGGGTTCCAGTCAAATCCCCAAAACGTCATGATGGTTATTCCGGTTCTAACATTGTTAATAAAGGTACTTATAGACTCAATTGGTAAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGGTTGTTGAAGGATATGAACATGTACAGCAGAGGAAAAAGCCTGTGTTTTTAAACTATGGAAGAGCGGAACACGCTTCAGTGAGCTAGCGattcccgtgtgttca < 2:220932/251‑15 (MQ=2) tGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCTGGGTTCAAAAccc < 1:395688/250‑1 (MQ=255) tCTGGAGAGTCAGGGGGCAAATCTAACCACCAGCACTTACTTCTGCTGGTTCCGGTGCGAAAATTGTTAATTAAGGTACTGGTAGAGTCACATGGGCAACGCAGAAGTTATGTGAAAACATGGAGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGCGGACACAGCATATGTTTTTGTACTATAGACGAACGAATCAGGATTAAGTAAACTAGCGACTATCCTGGCGTCAAAACCCGGAACg > 2:50497/1‑250 (MQ=12) ggAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTTAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCTGGGTTCAAAACCCGGAACGa < 1:246972/248‑1 (MQ=255) gggggCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCTGGGTTCAAAACCCGGAACGATCTTCACTATGt < 1:295317/251‑1 (MQ=255) | GAAATAACTGGCTGGCTGCTACACCATGTTGCCGGGCAACGAGGGAGACCGTCATCCCCGGTTCAAAGCTCTGCTGAACAATTGCGATCTTTTCCTGTGTGGTACGCCGTCTGCGTTTCTCCGGCCCTAAGACATCAATCATCTGTTCTCCAATGACTAGTCTAAAAACTAGTATTAAGACTATCACTTATTTAAGTGATATTGGTTGTCTGGAGATTCAGGGGGCCAGTCTAAACCCCAGAACTTACTTATGCTGATTCCGGTGCGAAAATTGTTAATAAAGGTACTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATGGGGTTGCGGAGGTTTTTTGAATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGCGAATATCCTGGGTTCAAAACCCGGAACGATCTTCACTATGT > NC_000913/1469008‑1469478 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |