New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1094245 =	NA (NA)	4 (0.110)	4/486	3.4	12.1%	noncoding (1258/1258 nt)	IS3	repeat region
	?	NC_000913	= 3429990	29 (0.800)					coding (34/258 nt)	yrdB	DUF1488 domain‑containing protein YrdB
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GAAAGCTTTAGCGGAAAGGATTCGGGAAAATGTTGAGCGTTTAACTGGCGATAATCCTGAATACGCTATACCACAAAAAGTGACGATTAGTATTGGCGCTGTTGTGACTCAGGAAAATGCGTTAAACCCAAATGAGATCTATCGACTGGCTGATAACGCACTTTACGAGGCGAAAGAGACCGGGCGTAATAAGGTGGTTGT‑GAGGGATGTGGTGAATTTTTGTGAGTCACCATAAAGCGGCATTTTGATCCTACCCACGTAATATGGACACAGGCCTAAGCGAGGTTCTTGTTTTCAAATTGTTCCGGACTGAGGCCGCCACACCAACTGTGCCGCCGCCACCGATTGTAATCACATTCGATATAATTAAACACCGTTGCCCGCATTATTTCCCGGCTGATAAAGTGTTCTCCATGGATACATTCCACTTTCAGCGAATGAAAGAAGCTTTCCACGCAGGCATTATCGTAGCAGCAACCTT  >  NC_000913/1094000‑1094480                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                            gAAAGCTTTAGCGGAAAGGATTCGGGAAAATGTTGAGCGTTTAACTGGCGATAATCCTGAATACGCTATACCACAAAAAGTGACGATTAGTATTGGCGCTGTTGTGACTCAGGAAAATGCGTTAAACCCAAATGAGATCTATCGACTGGCTGATAACGCACTTTACGAGGCGAAAGAGACCGGGCGTAATAAGGTGGTTGT‑GAGGGATGTGGTGAATTTTTGTGAGTCACCATAAAGCGGCATTTTGATcc                                                                                                                                                                                                                                        >  1:321710/1‑251 (MQ=255)                         ggAAAATGTTGAGCGTTTAACTGGCGATAATCCTGAATACGCTATACCACAAAAAGTGACGATTAGTATTGGCGCTGTTGTGACTCAGGAAAATGCGTTAAACCCAAATGAGATCTATCGACTGGCTGATAACGCACTTTACGAGGCGAAAGAGACCGGGCGTAATAAGGTGGTTGT‑GAGGGATGTGGTGAATTTTTGTGAGTCACCATAAAGCGGCATTTTg                                                                                                                                                                                                                                            <  1:216567/223‑1 (MQ=255)                         ggAAAATGTTGAGCGTTTAACTGGCGATAATCCTGAATACGCTATACCACAAAAAGTGACGATTAGTATTGGCGCTGTTGTGACTCAGGAAAATGCGTTAAACCCAAATGAGATCTATCGACTGGCTGATAACGCACTTTACGAGGCGAAAGAGACCGGGCGTAATAAGGTGGTTGT‑GAGGGATGGGGTGAATTTTTGTGAGTCACCATAAAGCGGCATTTTg                                                                                                                                                                                                                                            >  2:216567/1‑223 (MQ=255)                                   gAGCGTTTAACTGGCGATAATCCTGAATACGCTATACCACAAAAAGTGACGATTAGTATTGGCGCTGTTGTGACTCAGGAAAATGCGTTAAACCCAAATGAGATCTATCGACTGGCTGATAACGCACTTTACGAGGCGAAAGAGACCGGGCGTAATAAGGTGGTTGT‑GAGGGATGTGGTGAATTTTTGTGAGTCACCATAAAGCGGCATTTTGATCCTACCCACGTAATATGGACACAGGCCTAAGCGAg                                                                                                                                                                                                       <  1:311797/250‑1 (MQ=255)                                                     aaTCCTGAATACGCTATACCACAAAAAGTGACGACTAGTATTGGCGCGTTTGTGACTCAGGAAAATGCGTTAAACTCAAATGAGATCTATCGACTGGCTGATAACGCACTTTACGAGGCGAAAGAGACCGGGCGTAATAAGGTGGTTGT‑GAGGGATGTGGTGAATTTTTGTGAGTCACCATAAAGCGGCATTTTGATTTTACCCACGTAATAGGGACACAGGTCTAAGCGAGGTTCTTGTTTTCAAATTGt                                                                                                                                                                                    <  2:12487/251‑1 (MQ=255)                                                                cGCTATACCACAAAACGTGACGATTAGTATTGGCGCTGATGTGACTCAGGAAAATGCGTTAAACCCAAATGAGATCTATCGACTGGCTGATAACGCACTTTACGAGGCGAAAGAGACCGGGCGTAATCAGGAGGTTGT‑GAGGGATGTGGTGAATTTTTGTGAGTCACCATAAAGCGGCATTTTGATCCTACCCACGTAATATGGACACAGGCCTAAGCGGGGTTCTTGTTTTCCAATTGTTCCGGACTg                                                                                                                                                                           >  2:425337/1‑249 (MQ=255)                                                                     taCCACAAAAAGTGACGATTAGTATTGGCGCTGTTGTGACTCAGGAAAATGCGTTAAACCCAAATGAGATCTATCGACTGGCTGATAACGCACTTTACGAGGCGAAAGAGACCGGGCGTAATAAGGTGGTTGT‑GAGGGATGTGGTGAATTTTTGTGAGTCACCATAAAGCGGCATTTTGATCCTACCCACGTAATATGGACACAGGCCTAAGCGAGGTTCTTGTTTTCAAATTGTTcc                                                                                                                                                                                 <  2:27422/238‑1 (MQ=255)                                                                     taCCACAAAAAGTGACGATTAGTATTGGCGCTGTTGTGACTCAGGAAAATGCGTTAAACCCAAATGAGATCTATCGACTGGCTGATAACGCACTTTACGAGGCGAAAGAGACCGGGCGTAATAAGGTGGTTGT‑GAGGGATGTGGTGAATTTTTGTGAGTCACCATAAAGCGGCATTTTGATCCTACCCACGTAATATGGACACAGGCCTAAGCGAGGTTCTTGTTTTCAAATTGTTcc                                                                                                                                                                                 >  1:27422/1‑238 (MQ=255)                                                                      aCCACAAAAAGTGACGATTAGTATTGGCGCTGTTGTGACTCAGGAAAATGCGTTAAACCCAAATGAGATCTATCGACTGGCTGATAACGCACGTTACGAGGCGAAAGAGACCGGGCGTAATAAGGTGGTTGT‑GAGGGATGTGGTGAATTTTTGTGAGTCACCATAAAGCGGCATTTTGATCCTACCCACGTAATATGGACACAGGCCTAAGCGAGGTTCTTGTTTTCAAATTGTTCCGGACTGAGgccgcc                                                                                                                                                                   <  2:321710/251‑1 (MQ=255)                                                                                    cGATTAGTATTGGCGCTGTTGTGACTCAGGAAAATGCGTTAAACCCAAATGAGATCTATCGACTGGCTGATAACGCACTTTACGAGGCGAAAGAGACCTGGCGTAATAAGGTGGTTGT‑GAGGGATGTGGTGAATTTTTGTGAGTCACCATAAAGCGGCGTTTTGTTCCTACCCACGTAATATGGACACAGGCCTAAGCGAGGTTCTTGTTTTCAAATTGTTCCGGACTGAGGCCGCCACACCAACTGTgcc                                                                                                                                                     <  1:439799/251‑1 (MQ=255)                                                                                        tAGTATTGGCGCTGTTGTGACTCAGGAAAATGCGTTAAACCCAAATGAGATCTATCGACTGGCTGATAACGCACTTTACGAGGCGAAAGAGACCGGGCGTAATAAGGTGGTTGT‑GAGGGATGTGGTGAATTTTTGTGAGTCACCATAAAGCGGCATTTTGATCCTACCCACGTAATATGGACACAGGCCTAAGCGAGGTTCTTGTTTTCAAATTGTTCCGGACTGAGGCCGCCACACCAACTGTgccgcc                                                                                                                                                  <  1:437484/250‑1 (MQ=255)                                                                                            atgtgggctgtgttgattCAGAAAAATGCGTTAAACCAAAATGAGATCTATCGATTGGTGGATAAGGCTCTTAACGAGGCAAAAGAGCCCGGGCGGAATAAGGTGGTTGT‑GAGGGATGTGGTGAATTTTTGTGAGTCACCATAAAGCGGAATTTTGATCCTCCCCACGTAATAGGGACACAGGCCTACGCGAGGTTCTTGTTTCCAAATTGTTCCGGACTGAGGCCGCCACACCAACTGTGCCGCCGCCa                                                                                                                                              <  2:172685/233‑1 (MQ=21)                                                                                              tGGCGCTGTTGTGACTCAGGAAAATGCGTTAAACCCAAATGAGATCTATCGACTGGCTGATAACGCACTTTACGAGGCGAAAGAGACCGGGCGTAATAAGGTGGTTGT‑GAGGGATGTGGTGAATTTTTGTGAGTCACCATAAAGCGGCATTTTGATCCTACCCACGTAATATGGACACAGGCCTAAGCGAGGTTCTTGTTTTCAAATTGTTCCGGACTGAGGCCGCCACACCAACTGTGCCGCCGCCACCg                                                                                                                                           >  1:181765/1‑251 (MQ=255)                                                                                                  gcTGTTGTGACTCAGGAAAATGCGTTAAACCCAAATGAGATCTATCGACTGGCTGATAACGCACTTTACGAGGCGAAAGAGACCGGGCGTAATCAGGTGGTTGT‑GAGGGATGTGGTGAATTTTTGTGAGTCACCATAAAGCGGCATTTTGATCCTACCCACGTAATATGGACACAGGCCTAAGCGAGGTTCTTGTTTTCAAATTGTTCCGGACTGAGGCCGCCACACCAACTGTGCCGCCGCCACCGCTTg                                                                                                                                       >  2:362988/1‑251 (MQ=255)                                                                                                       tgtgACTCAGGAAAATGCGTTAAACCCAAATGAGATCTATCGACTGGCTGATAACGCACTTTACGAGGCGAAAGAGACCGGGCGTAATAAGGTGGTTGT‑GAGGGATGTGGTGAATTTTTGTGAGTCACCATAAAGCGGCATTTTGATCCTACCCACGTAATATGGACACAGGCCTAAGCGAGGTTCTTGTTTTCAAATTGTTCCGGCCTGCGGCCGCCACACCAACTGTGCCGCCGCCACCGATTGTAATc                                                                                                                                  >  2:437506/1‑251 (MQ=255)                                                                                                        gtgACTCAGGAAAATGCGTTAAACCCAAATGAGATCTATCGACTGGCTGATAACGCACTTTACGAGGCGAAAGAGACCGGGCGTAATAAGGTGGTTGT‑GAGGGATGTGGTGAATTTTTGTGAGTCACCATAAAGCGGCATTTTGATCCTACCCACGTAATATGGACACAGGCCTAAGCGAGGTTCTTGTTTTCAAATTGTTCCGGACTGAGGCCGCCACACCAACTGTGCCGCCGCCACCGATTGTAATc                                                                                                                                  >  1:314234/1‑250 (MQ=255)                                                                                                         gaacccagaaaaaTGCGTTAAACCCAAATGAGATCTATCGTCTGGCTGATAACGCCCTTTACGAGGCGAAAGAGACCGGGTGTAATAAGGTG‑TTGTTGAGGGATGTGGTGAATTTTTGGGAGTCACCATAAAGCGGCTTTTTGATCCTCCCCACGTAATAGGGACACAGGCCTAAGCGAGGTTCTTGTTTTCAAATTGTTCCGGACTGAGGCCGCCACACCAACTGTGCCGCCGCCACCGATTGTAATcac                                                                                                                                <  2:364459/242‑1 (MQ=25)                                                                                                                  aaaaTGAGTTAAACCCAAAGGGGATGTATCGACGGGCGGAGAACGCCTTTTACGAGGCGAAAGAGAACGGGCGTAAAAAGGTGGTTGT‑GAGGGATGTGGTGAATTTTTGTTAGTCACCATAAAGCGGAATTTTGACCCTACTCATGTAATATGGACTTAGGCCGAAGCTAGGTTCTTGTTTTCAAATTGTTCCGGACTGAGGCCGCCACACCAACTGTGCCGTCGCCACCGATTGTAATCACATTCGatat                                                                                                                       <  1:360948/251‑1 (MQ=21)                                                                                                                                   aaggagaTCTACCGCCTGGCTGATAACGAACTTTACGAGGCGAAAGAGACCGGGCGTAATAAGGTGGTTGT‑GAGGGATGTGGTGAATTTTTGTGAGTCACCATAAAGCGGCATTTTGATCCTACCCACGTAATATGGACACAGGCCTAAGCGAGGTTCTTGTTTTCAAATTGTTCCGGACTGAGGCCGCCACACCAACTGTGCCGCCGCCACCGATTGTAATCACATTCGATATAATTAAACACCGTTGcc                                                                                                      <  1:223327/248‑1 (MQ=255)                                                                                                                                   aaTGAGATCTACCGACTGGCTGATAACGCACTTTACGAGGCGAAAGAGACCGGGCGTAATAAGGTGGTTGT‑GAGGGATGTGGTGAATTTTTGTGAGTCACCATAAAGCGGCATTTTGATCCTACCCACGTAATATGGACACAGGCCTAAGCGAGGTTCTTGTTTTCAAATTGTTCCGGACTGAGGCCGCCACACCAACTGTGCCGCCGCCACCGATTGTAATCACATTCGATATAATTAAACACCGTTGcc                                                                                                      <  1:166915/251‑1 (MQ=255)                                                                                                                                          tCTAGCGACTGGCTGATAACGCACTTTACGAGGCGAAAGCGACCGGGCGTAATAAGGAGGTTGT‑GAGGGATGTGGTGAATTTTTGTGAGTCAACATAAAGCGGCATTTTGATCCTACCCACGTAATATGGACACAGGACTAAGCGAGGTTCTTGTTTTCAAATTGTTCCGGACTGAGTCCGCCACACCAACTGTGCCACCGCCACCGATTGTAATCACATTCGATATAATTAATAACCGTTGCCCGCatt                                                                                                >  2:376701/1‑250 (MQ=21)                                                                                                                                                        gATAACGCACATTACGAGGCGAAAGAGAACGGGCGTAATAAGGAGGTTGT‑GAGAGCTGTGGGGAATTTTTGTGAGGCACCATAAAGCGGCATTTTGATCCTACCCACGTAATATGGACACAGGCTTAAGCGAGGTTCTTGTTTTCACATTGTTCCGGACTGAGGCCGCCACACCAACTGTGCCGCCGCCACCTATTGTAATCACAATCGAAATAATTAACAACCGTTGCCCACATTATTTCCCGgatgat                                                                                  >  2:328995/1‑250 (MQ=18)                                                                                                                                                                        aGGCGAAAGAGACCGGGCGTAATAAGGTGGTTGT‑GAGGGATGTGGTGAATTTTTGTGAGTCACCATAAAGCGGCATTTTGATCCTACCCACGTAATATGGACACAGGCCTAAGCGAGGTTCTTGTTTTCAAATTGTTCCGGACTGAGGCCGCCACACCAACTGTGCCGCCGCCACCGATTGTAATCACATTCGATATAATTAAACACCGTTGCCCGCATTATTTCCCGGCTGATAAAGTGTTCTCCATgg                                                                  >  2:355487/1‑250 (MQ=255)                                                                                                                                                                                tagaCCGGGCGTAATAAAGAGGTTGA‑GAGGGATGTGGTGAATTTTTGTGAGTCACAATAAAGCGGCATTTTGATCCTACCCACGTAATATGGACACAGGCCTAAGCGAGGTTCTTGTTTTCAACTTGTACCGGACTGAGGCCACCACACCACCTGTGCCGCCGCCACCGATTGTAATCACATTCGATATAATTAAACACCGCTTCACGAATTATTTCCCTGCTGGTAAAGTGTTCTCCATGGTTACCTTcc                                                         >  2:191218/2‑251 (MQ=17)                                                                                                                                                                                gagaCCGGGCGTAATAAGGTGGTTGT‑GAGGGATGTGGTGAATTTTTGTGAGTCACCATAAAGCGGCATTTTGATCCTACCCACGTAATATGGACACAGGCCTAAGCGAGGTTCTTGTTTTCAAATTGTTCCGGACTGAGGCCGCCACACCAACTGTGCCGCCGCCACCGATTGTAATCACATTCGATATAATTAAACACCGTTGCCCGCATTATTTCCCGGCTGATAAAGTGTTCTCCATGGAtcaattcc                                                         >  2:231889/1‑244 (MQ=255)                                                                                                                                                                                gagaCCGGGCGTAATAAGGTGGTTGT‑GAGGGATGTGGTGAATTTTTGTGAGTCACCATAAAGCGGCATTTTGATCCTACCCACGTAATATGGACACAGGCCTAAGCGAGGTTCTTGTTTTCAAATTGTTCCGGACTGAGGCCGCCACACCAACTGTGCCGCCGCCACCGATTGTAATCACATTCGATATAATTAAACACCGTTGCCCGCATTATTTCCCGGCTGATAAAGTGTTCTCCATGGATACATTcc                                                         >  2:79008/1‑251 (MQ=255)                                                                                                                                                                                         cGTAATAAGGTGGTTGT‑GAGGGATGTGGTGAATTTTTGTGAGTCACCATAAAGCGGCATTTTGATCCTACACACGTAATATGGACACAGGCCTAAGCGAGGTTCTTGTTTTCAAATTGTTCCGGACTGAGGCCGCCACACCAACTGTGCCGCCGCCACCGATTGTAATCACATTCGATATAATTAAACACCGTTGCCCGCATTATTTCCCGGCTGATAAAGTGTTCTCCATGGATACATTCCACTTTCAGc                                                >  1:360798/1‑251 (MQ=255)                                                                                                                                                                                                           gAGGGATGTGGTGAATTTTTGTGAGTCACCATAAAGCGGCATTTTGATCCTACCCACGTAATATGGACACAGGCCTAAGCGAGGTTCTTGTTTTCAAATTGTTCCGGACTGAGGCCGCCACACCAACTGTGCCGCCGCCACCGATTGTAATCACATTCGATATAATTAAACACCGTTGCCCGCATTATTTCCCGGCTGATAAAGTGTTCTCCATGGATACATTCCACTTTCAGCGAATGAAAGAAGCTTTc                               <  1:276308/251‑1 (MQ=255)                                                                                                                                                                                                                               gtgAGTCACCATAAAGCGGCATTTTGATCCTACCCACGTAATATGGACACAGGCCTAAGCGAGGTTCTTGTTTTCAAATTGTTCCGGACTGAGGCCGCCACACCAACTGTGCCGCCGCCACCGATTGTAATCACATTCGATATAATTAAACACCGTTGCCCGCATTATTTCCCGGCTGATAAAGTGTTCTCCATGGATACATTCCACTTTCAGCGAATGAAAGAAGCTTTCCACGCAGGCATTATCGTag            <  1:449890/250‑1 (MQ=40)                                                                                                                                                                                                                                  aGTCACCATAAAGCGGCATTTTGATCCTACCCACGTAATATGGACACAGGCCTAAGCGAGGTTCTTGTTTTCAAATTGTTCCGGACTGAGGCCGCCACACCAACTGTGCCGCCGCCACCGATTGTAATCACATTCGATATAATTAAACACCGTTGCCCGCATTATTTCCCGGCTGATAAAGTGTTCTCCATGGATACATTCCACTTTCAGCGAATGAAAGAAGCTTTCCACGCAGGCATTATCGTagcagc        >  1:110100/1‑251 (MQ=38)                                                                                                                                                                                                                                        cATAAAGCGGCATTTTGATCCTACCCACGTAATATGGACACAGGCCTAAGCGAGGTTCTTGTTTTCAAATTGTTCCGGACTGAGGCCGCCACACCAACTGTGCCGCCGCCACCGATTGTAATCACATTCGATATAATTAAACACCGTTGCCCGCATTATTTCCCGGCTGATAAAGTGTTCTCCATGGATACATTCCACTTTCAGCGAATGAAAGAAGCTTTCCACGCAGGCATTATCGTAGCAGCAACCtt  >  2:218330/1‑251 (MQ=35)                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                            GAAAGCTTTAGCGGAAAGGATTCGGGAAAATGTTGAGCGTTTAACTGGCGATAATCCTGAATACGCTATACCACAAAAAGTGACGATTAGTATTGGCGCTGTTGTGACTCAGGAAAATGCGTTAAACCCAAATGAGATCTATCGACTGGCTGATAACGCACTTTACGAGGCGAAAGAGACCGGGCGTAATAAGGTGGTTGT‑GAGGGATGTGGTGAATTTTTGTGAGTCACCATAAAGCGGCATTTTGATCCTACCCACGTAATATGGACACAGGCCTAAGCGAGGTTCTTGTTTTCAAATTGTTCCGGACTGAGGCCGCCACACCAACTGTGCCGCCGCCACCGATTGTAATCACATTCGATATAATTAAACACCGTTGCCCGCATTATTTCCCGGCTGATAAAGTGTTCTCCATGGATACATTCCACTTTCAGCGAATGAAAGAAGCTTTCCACGCAGGCATTATCGTAGCAGCAACCTT  >  NC_000913/1094000‑1094480

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.