| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,966,530 | 2 bp→TT | coding (114‑115/1260 nt) | rho → | transcription termination factor Rho |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,966,530 | 0 | C | T | 98.5% | 226.7 / ‑3.9 | 66 | I38I (ATC→ATT) | rho | transcription termination factor Rho |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (38/26); total (40/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.49e-01 | |||||||||||
| * | NC_000913 | 3,966,531 | 0 | C | T | 98.5% | 228.6 / ‑3.9 | 66 | L39L (CTG→TTG) | rho | transcription termination factor Rho |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (39/26); total (40/26) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.22e-01 | |||||||||||
ACTCTCCTGTGACCAGGCAGCGAAAAGACATGA‑GTCGATGACCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TCCTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACC‑ATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAA > NC_000913/3966292‑3966760 || cctctCCTGGGACCAGGCAGCGAAAAGACATGA‑GGCGATGACCTTAAACAGGCATGGATGACCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCAc < 2:482811/250‑1 (MQ=255)aCTCTCCTGTGACCAGGCAGCGAAAAGACATGA‑GTCGATGACCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCAc > 1:244876/1‑251 (MQ=255) ctctCCTGTGACCAGGCAGCGAAAAGACATGA‑GTCGATGACCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGCGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCC‑TTTTGAA‑GCAGCACg > 1:803912/1‑251 (MQ=255) cccttggACCAGCCAGCGAAAAGACA‑GACGGCGATGACCGTAAACAGGCATGTATTATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCaa < 2:607717/245‑1 (MQ=255) gACCAGGCAGCGAAAAGACATGA‑GTCGATGACCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTg < 1:220885/251‑1 (MQ=255) aCCAGGCAGCGAAAAGACATGA‑GTCGATGACCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAATgg > 2:17147/1‑251 (MQ=255) cAGGCAGCGAAAAGACATGA‑GTCGATGACCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTCTGCGTAAGCAGGAAATTATTTTTTCCA‑TTTTGAA‑TCAGCACGCAAAGAGTGGCg > 2:727723/1‑251 (MQ=255) cAGGCAGCGAAAAGAAATGA‑GTCGATGACCGTAAACAGGCATGGATGATCCTGACATACAATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATAAGCAGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGAGGCTGGCAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCAAGCAAAGAGTGGCg > 1:745993/1‑251 (MQ=255) ggCAGCGAAAAGACATGA‑GTCGATGACCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGaa < 1:510920/251‑1 (MQ=255) aGCGAAAAGACATGA‑GTCGATGACCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGa > 1:587365/1‑247 (MQ=255) gAAAAGACATGA‑GTCGATGACCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGat‑att > 2:248616/1‑250 (MQ=255) aaGACATGA‑GTCGATGACCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTTCCA‑TTTTGAA‑GCACCACGCAAAGAGGGGCGAAAAT‑ATCttt > 2:430139/1‑251 (MQ=255) gACATGA‑GTCGATGACCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTgg < 1:533515/251‑1 (MQ=255) a‑GTCGATGACCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGAGCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATgg < 1:494606/251‑1 (MQ=255) a‑GTCGATGACCGAAAACAGGCATGGATGATCCTGACATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGCAACTATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGAAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGAAAGGAGTGGCGAAGAT‑ATATTTGGTGTTgg > 1:721115/1‑251 (MQ=255) tCGATGACCGTAAACAGGCATGGATGACCCTGCCATACCATTCACACCATTAAGTTCGAACTTTACCCCAAGTTTAAGAACTCACACCACTATAAATCTTAACCACTTAGAGACTCCGCCGGTTTCTCAACTGATCACTCTCGGCGGAAATATGGGGCTGGAAACCCTGGCTCGTATGCGTCAGCGGGACATTATTTTTGCCC‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGCAGaggtcgttaggtatggcg > 1:326960/1‑234 (MQ=255) gcGATGACCGTAAACAGGTATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCg < 2:492503/250‑1 (MQ=255) cGATGACCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGt > 1:669291/1‑251 (MQ=255) gTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGgaga < 1:402000/251‑1 (MQ=255) tAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTgg > 1:745037/1‑247 (MQ=255) aaaCAGGCATGGATGAACCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAAGACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGata < 2:62803/251‑1 (MQ=255) gaagtgatgctCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTCCTGTAGATATTGCAg < 2:169426/246‑1 (MQ=255) tgatCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGCAggatggat > 1:574178/1‑251 (MQ=255) atCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAGGAT‑ATCTTTGGTGTTGGGGTACTGGGGATATTGAAGGATGGAttt > 2:715332/1‑251 (MQ=255) atCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGAttt < 1:550934/251‑1 (MQ=255) gccattacATTCTCAACATTAAGTTCGAGATTGACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGCATGATTGATTTGGtt < 2:734444/243‑1 (MQ=255) aTACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGAAGGATGGATTTGGTTtcct > 2:638072/1‑251 (MQ=255) aTTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTg < 1:428566/239‑1 (MQ=255) aacaTTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGc > 1:114919/1‑249 (MQ=255) gTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTCCTGGAGATATTGCAGGATGGATTTGGTTTCCTCAGTTCCGCAgcacgatcc > 2:114516/1‑243 (MQ=255) tCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCtc > 2:196404/1‑250 (MQ=255) cGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCGTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCGCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTa < 1:722673/250‑1 (MQ=255) aTTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCg < 1:17147/251‑1 (MQ=255) aTTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGAGCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCg < 1:8018/251‑1 (MQ=255) tACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGcc < 1:347074/250‑1 (MQ=255) ccccAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGCGATATTGCCGGATGGATTTg > 1:43321/1‑213 (MQ=255) ccccAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTg < 2:43321/213‑1 (MQ=255) aGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGGTTTGGTTTCCTCCGTTCCGCAGACAGCTCCCACCTCCCCGGTCCtgt > 2:671741/1‑250 (MQ=255) aGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCtg > 1:791141/1‑250 (MQ=255) ttAAGAACTCACACCACTATGACTCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGGTGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCtgatgc > 2:215532/1‑250 (MQ=255) ttAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCCCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑ATTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATATTTGGTGACGGCGTAATGGAGATATTGCAGGATGGATTTGGTTTCTCCCGTTCCGCAGTAAGATCCTACCTCGCCGGTCCtgatg > 2:542529/1‑250 (MQ=255) aaGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGAc < 2:194724/250‑1 (MQ=255) aCTCAAACCACTATGAAACTTACCGAATTAACGACTACGCCGGTTTCTGCGCAGATCACTCTCAGCGAAAATATGGAGCTGGAAAACCTGGCTCGAATGCGTACGCAGGAAATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGCTGGCGCACTGGGGATATTGAAGGTAGGCTTTGGTTTCCTCGGTTACGCAGACCGCCCCTACCTCCCCgatcggaatgtcatct > 2:537519/1‑235 (MQ=255) cTCACACAACTATGAATCTTACCGAATTACAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCCCGCAAAAAGTGGCGAAGCT‑ATCTTTGGATAAGGCGGACTGGAGATATTGACGGCAGGATTTGGTTTCCTCCGTTCCGCAGACCGCTCCTACCCAGCCGGTCCtgattgcatcctc > 2:88630/1‑242 (MQ=255) cacTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACCCTCGGCGAAAATATGGGGCTGGCAAACCTGGCTCGAATGCGTAAGCAGGACATTATTTTT‑CCACTTTTGAA‑GCAGCCCGCGAAGAGGGGCGAAGAT‑ATCTTTGGGGATGGAGTACTGGAGATATTGGAGGATGGGTTTGGTTTCCTCCGTGCCGCAGACAGCTCCTACCTCGCCGGTCCTTGTGGCATCTACGTTAccc > 1:62859/1‑251 (MQ=255) acTATGAAGCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAATCCTGGCTCGTATGCGTAAGCAGGACATGATTTGTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATGTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGTTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTcccc < 1:112660/251‑1 (MQ=255) tCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATgg > 2:196766/1‑153 (MQ=255) tCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATgg < 1:196766/153‑1 (MQ=255) gAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGCAGTATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAACCAAATccgccg > 1:474163/1‑251 (MQ=255) aaTTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGgag < 1:179905/155‑1 (MQ=255) aaTTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGgag > 2:179905/1‑155 (MQ=255) aaTTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGt > 1:436711/1‑251 (MQ=255) gAATACGCCGGTTTCTGAGCTGCTCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCCGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGCCAGCTCCTACCTCGCCGGTCCTGATGCCCTCTACGTTTCCCCTAGCCAAATCCGCCGttttcacc > 2:327458/1‑246 (MQ=255) gAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTACGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAAcc > 2:314137/1‑251 (MQ=255) ggTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCATGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTg > 1:22386/1‑251 (MQ=255) ggTTTCTGAGCGGATCACTCTCGGCGAAAATATGGGGCGGGAAACCCTGGCTCGTAGGCGTAAGCAGGACATTATTTTTGCCA‑TTTGGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑AGCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCATACAGCTCTTCCCTCGCCGGTCCTTAGGACAGCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTg < 1:715332/251‑1 (MQ=255) gAAAATATGGGGCTGGAAACCCTGGCTCCTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGAGGCCAAGAT‑ATCTTTGGTTATGGCGTACTGGAGATATTGCCGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCCAATCCGCCGTTTCAACCTCCGCCCTGGTGATACC‑CTCTCTGGCAAGAtttc > 2:416004/1‑249 (MQ=255) aacccTGGCTGGTAGGCGTAAGCGGGACATTATTTTTGC‑T‑TTTTGAAAGCAGCAGGCAAAGAGGGGCGAAGAT‑TTCTTGGGTGAGGGCGTACGGGAGATATTGAGGGATGTATTTGGTTCCCTCCGTCCCGCAGACAGCTCCTCCCTCGCCGTTCCTTAGGACATTTACGTTCCCCCTAGCAAAATCCGCCGTTTCAACCCCCGAACGGGTGATACC‑ATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTg < 1:114516/248‑1 (MQ=255) cTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCCGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACC‑ATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGCACg > 2:13831/1‑251 (MQ=255) tGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACC‑ATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGc > 2:599632/1‑251 (MQ=255) gctggttggCGTAAGCAGGATATTAGTTTTGCCT‑TTTCGAA‑TCAGCACGCAAAGAGTGGC‑AATATTATCTTGGGTGATGGCTGGCTGAATATATTGCAGGATGGATTGGTTTTCCTCCGTTCCGCAGACAGCTCTTACCCCGCCGGTCCTGATGACACCTACTGTTCCCTTAGCCAAACCCGCCGTTTCACCCCCCGCACTTTTGATACC‑ATCTCTGGTAAGATTCGCCCGCCGAAAGAACGTGAACGCTa < 1:676039/243‑1 (MQ=255) gCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGCCAGCTCCTACCTCGCCGGTCCTGCTGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACC‑ATCTCTGGTAAGATTCGCCCGCCGAAAGACGGGGAACGCt > 2:470783/1‑250 (MQ=255) cttATGCGAAAGCGGGACATTTTTTTTCCCT‑TTTTAAA‑GCGGCACGAAAAGAGGGGGGAAGAT‑ATTTTTGGTGATGGCGTACGGGAGATATGGCAGGAGGGATTTGGTTTCCCCCTTCCCGCAGACAGCCCCTCCCCCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCCCCGCACTGGTGATCCC‑ATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTAt < 1:248616/247‑1 (MQ=255) aTGCGTAAGCAGGACATTATTTTTGCCA‑TCCTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTCCCTCGCCGGTCCTGATGGCATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACC‑ATCTCTGGTAAGATTCGCCCGCCGGAAGAAGGGTAACGCTAtttttc > 2:176891/1‑249 (MQ=255) aGCAGGACATTATTTTTGCCA‑TATTGAA‑GCAGCACGCAAAGAGTGGCGAGGAT‑ATCTTTGGGGATGGCGTACTGGAGATAGTGCTGGGTGGATTTGGTTTCCTCCGTTCCGCAGACAACTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCCAATCCGCCGTTTCAACCTCCGCACTGG‑GGTACCCATCTCTGGAAACATTCGACAGCCGAAAGAAAGTGAACGCTAtttttctcatacg > 2:591576/1‑242 (MQ=255) ggACATTATTTTTGCCA‑TTTTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACC‑ATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGaa > 1:729097/1‑249 (MQ=255) || ACTCTCCTGTGACCAGGCAGCGAAAAGACATGA‑GTCGATGACCGTAAACAGGCATGGATGATCCTGCCATACCATTCACAACATTAAGTTCGAGATTTACCCCAAGTTTAAGAACTCACACCACTATGAATCTTACCGAATTAAAGAATACGCCGGTTTCTGAGCTGATCACTCTCGGCGAAAATATGGGGCTGGAAAACCTGGCTCGTATGCGTAAGCAGGACATTATTTTTGCCA‑TCCTGAA‑GCAGCACGCAAAGAGTGGCGAAGAT‑ATCTTTGGTGATGGCGTACTGGAGATATTGCAGGATGGATTTGGTTTCCTCCGTTCCGCAGACAGCTCCTACCTCGCCGGTCCTGATGACATCTACGTTTCCCCTAGCCAAATCCGCCGTTTCAACCTCCGCACTGGTGATACC‑ATCTCTGGTAAGATTCGCCCGCCGAAAGAAGGTGAACGCTATTTTGCGCTGCTGAA > NC_000913/3966292‑3966760 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |