Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,253,002	C→T	intergenic (+17/+83)	dhaR → / ← ycgV	DNA‑binding transcriptional dual regulator DhaR/putative autotransporter adhesin YcgV

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,253,002	0	C	T	100.0%	163.9 / NA	48	intergenic (+17/+83)	dhaR/ycgV	DNA‑binding transcriptional dual regulator DhaR/putative autotransporter adhesin YcgV
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (23/25);  total (23/25)

CGAGCAGGCGACAGATGATGTCAGCGCCACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGG‑AAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTCTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGCCATTACCTTTGAAACTGTACTTCT  >  NC_000913/1252775‑1253239                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                              cGAGCAGGCGACAGATGATGTCAGCGCCACCCGCCTTTCCACCAGTCTGTCATTTGCGGACGTTGAAAACGAGGCAATCATTAACGCAGCCCAGGTCACAGGCGGTCGCCTTTAGGAAATGTCGGCCTTTCTTCGGATCGCACGCACTACGCCAGGGCGG‑GAACAGAAGCAACAATGCATTTATGAAAGGCAGTTTAACCGGCCGGG‑ATTAAA‑AGCAGGAACGATTTTTGATaactcagggtgaattgaat                                                                                                                                                                                                                        >  1:365689/1‑233 (MQ=255)        gCGACAGATGATGTCAGCGCCACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGG‑AAAATGAAGCAACATGGCATTGTTGCGGGGCAGGTTAAGCG‑CCGGGGATGAAA‑GACAGAAAAGATTTTTTATACCTCAGAGGGATCTGTATTTCATTc                                                                                                                                                                                                                 >  1:274063/1‑251 (MQ=255)            cAGATGATGTCAGCGCCACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGG‑AAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTg                                                                                                                                                                                                                                <  1:252483/232‑1 (MQ=255)             aGATGATGTCAGCGCCACCCGCCTTTCCACCAGTCTGTCATTTGCGGACGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGACTTCAGGAAATGACGGCTTTCTTTGGGATCGGCCGCAATACCCTGTGGCGGTAAAAT‑AAGCAACCTGGGACTTATGCAGGGCAGTTTAATCG‑CCGGGGATTAAA‑GACAAAAACGATTTTTGGTACATCCGCGTGAttttttgttcctttcgggg                                                                                                                                                                                                            >  1:675634/1‑233 (MQ=255)                          gcCACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGG‑AAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAAtt                                                                                                                                                                                               <  1:152564/251‑1 (MQ=255)                            cACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACCTGGGATCGGCCGCACTACGCTGTGGCGG‑GAAATGGAGCAACATGGCATTGGTGCAGGGCCGTTTAAGCG‑CCGGGGATGAAA‑GACCGGAACGATTTTTGATACATAAAAGGGGTTTGTATTTCATTTCGGCGGACGCTAACAAattt                                                                                                                                                                                             >  1:394963/1‑251 (MQ=255)                                     ttCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGG‑AAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGAGACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCg                                                                                                                                                                                     <  1:766525/250‑1 (MQ=255)                                              tCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCCTTACTTGGGATCGGCCGCACTACGCTGTGGCGG‑AAAATGAAGCAAAATGGGATTGATGCCGGGGAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGGGATCTGTATTTCATTTCGGCGCACGCTAACAATTTTTAGCATCGTTTAAGGGCt                                                                                                                                                                           >  1:558051/1‑251 (MQ=255)                                                tGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCCTTCAGGAAATGTCGGCTTTAATTGGGATCGGCCGCACTACGCTGTGGCGG‑GAAATTAAGCAACATGGGCTTGATGCAGGGCAGTTTAAGAG‑CCGGGGTTTAAA‑GACAAAAACGATTTTTTATACATCCAAATGATCTTTATTTCATTTCGGCGCCCACTAACAATTTTTCGCATCGTTTTAGGGcctt                                                                                                                                                                         >  1:468307/1‑248 (MQ=255)                                                           gAAGTAGAAAAAGAGGCAAGTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTAGGCTTTACTTGGGATCGGACGCACTACGCTGTGGCGG‑AAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTGCAGCATCGTTTAAGGGCTTGTCTATCCCGCa                                                                                                                                                              <  2:187144/251‑1 (MQ=255)                                                                tGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGG‑AAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTa                                                                                                                                                          <  1:285871/250‑1 (MQ=255)                                                                     aaGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGGCGGCTTTACTTGGGGTCGGCCGCACTACGCTGTGGCGG‑GAAAAGAAACAAAAAAGCATTGATGCGGGGCAGCTTAAGCG‑CCGGGTATGGAA‑GACAGAAACGGTTTTTGATACATTAGAGTGGTTCGTATTTTATTTCGGCGCCCGCCAAAAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCCCCTAAAAgac                                                                                                                                                    >  1:432515/1‑249 (MQ=255)                                                                      agagGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAAGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGG‑AAAATGAAGCAACATGGCATTGTTGCAGGGCAGTTTAAGAG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGCGTGGTCTGTATTTCATTCCGGCGCCCGCTAACAATTTTTCGCATCGTTTTAGGGCTTGTCTATACCGCAATTAAAAACTg                                                                                                                                                   >  1:620931/1‑251 (MQ=255)                                                                                attaACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGG‑AAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATAtc                                                                                                                                         <  2:274063/251‑1 (MQ=255)                                                                                   aaCGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGG‑AAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATAtcct                                                                                                                                       <  1:188383/250‑1 (MQ=255)                                                                                       ccgCCCAGGTCACAGGCTGGCGCATTAATGAAAGGGCGGCTTTCCTGGGGATCGGCCGCACTGCGCTGTGGCGG‑AAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATTAAA‑GACAGAATCGATTTTTGATACATCAGAGTGATCTGTATTCCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCGGAAGCGATATCCTCCGtt                                                                                                                                  <  2:681532/249‑1 (MQ=255)                                                                                       cAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGG‑AAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTGCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCCCCGtt                                                                                                                                  <  2:50020/251‑1 (MQ=255)                                                                                        aGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGG‑AAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTg                                                                                                                                 <  1:262377/251‑1 (MQ=255)                                                                                               gTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGG‑AAAATGAAGCAACATGGCATTGATGCAGGGCAATTTAAGCG‑CCGGGTATGAAAAGA‑AGAAACGGTTTTTTATACCTCAACGTGATATGGATTTTATTCCGGCGCCCGCTAAAAAATTTCCGCATCGTTTAAGGGGTTGTCTATTCCGCCCTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCt                                                                                                                          >  1:554440/1‑251 (MQ=255)                                                                                                gcacaGGCGGTCGCAGTCAGGAAATGGCGGCTTTACTTGGGATCGGCCGCACGACGCTGTGGCGG‑AAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTAGCCCGCACTTAAAAGCTGAAGCGATATACTCCGTTGACTTGCtt                                                                                                                         <  2:144177/250‑1 (MQ=255)                                                                                                        ggacGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGG‑AAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAC‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTTTCTCTCCCGCACTTAAAAGTTTAAGCGATATCCTCCGTTGACTTGATTCTGATCa                                                                                                                  >  2:761825/4‑250 (MQ=255)                                                                                                                    gtaaTGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGG‑AAAATGAAGCAACATGGCAGTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACGTAAAAGCTGAAGCGATATCCACCGTTGACTTGCTTCTGATCAAAGAGGTTACCCt                                                                                                     <  2:468307/249‑1 (MQ=255)                                                                                                                          tCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGG‑AAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATAAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAACTTAAGCGCTATCCTCAGTTGACTTGCTTCTGTTCAAAGAGGTTACCCTGCgtgt                                                                                               >  2:728584/1‑251 (MQ=255)                                                                                                                            ggCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGG‑AAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTa                                                                                              >  1:762699/1‑250 (MQ=255)                                                                                                                                 tACTTGGGATCGGCCGCACTACGCTGTGGCGG‑AAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCg                                                                                         <  2:558051/250‑1 (MQ=255)                                                                                                                                      gggATCGGCCGCACTACGCTGTGGCGG‑AAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGCCTTGCTTCTGCTCAAAGAGGTTACCCTGCGTGTAATCCGCTTCg                                                                                    >  2:219006/1‑250 (MQ=255)                                                                                                                                      gggATCGGCCGCACTACGCTGTGGCGG‑AAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGAATTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCg                                                                                    >  2:690182/1‑250 (MQ=255)                                                                                                                                          gcGGCCGCACTACGCTGGGGCGG‑AAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAATCGATTGTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGTCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATAGCCTCCGTTGACGTGCTGCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATa                                                                               <  2:111348/250‑1 (MQ=255)                                                                                                                                            ggCCGCACTACGCTGTGGCGG‑AAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGa                                                                             <  1:306064/251‑1 (MQ=255)                                                                                                                                            ggCCGCACTACGCTGTGGCGG‑AAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGGAATCCGCTTCGCGAt                                                                                >  2:232768/1‑248 (MQ=255)                                                                                                                                            ggCCGCACTACGCTGTGGCGG‑AAAATGAAGAAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAACGCTGAAGCGATATCCTCCGTTGCCTTGCTTCTGATCAAAGAGGTTATCCTGCGTGTAATCCGCTTCGAGAt                                                                                >  2:564898/1‑248 (MQ=255)                                                                                                                                               cGCACTACGCTGTGGCGG‑AAAATGAAGCAACATGGCATTGCTGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTCTCCCGCACTTACAAGCTTAAGCGATATCCTCCGTTGACTTGCTTCTTATCCAATAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAAtt                                                                          >  2:641490/1‑250 (MQ=255)                                                                                                                                                gCACTACGCTGTGGCGG‑AAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAAtgt                                                                         <  1:690182/251‑1 (MQ=255)                                                                                                                                                            ggCGG‑AAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCtgtttgtt                                                             <  1:641490/251‑1 (MQ=255)                                                                                                                                                              cGG‑AAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTtat                                                           >  1:384736/1‑251 (MQ=255)                                                                                                                                                                  aaaaTGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACt                                                        <  1:232768/251‑1 (MQ=255)                                                                                                                                                                       gAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCa                                                   <  1:491611/251‑1 (MQ=255)                                                                                                                                                                             aCATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACt                                             >  2:808454/1‑251 (MQ=255)                                                                                                                                                                               aTGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTcc                                           >  1:777015/1‑251 (MQ=255)                                                                                                                                                                                 ggCAGTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTGAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTGCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTccc                                          <  2:675634/250‑1 (MQ=255)                                                                                                                                                                                    aTTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGc                                      <  2:219032/251‑1 (MQ=255)                                                                                                                                                                                      tGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGcc                                     <  1:472703/250‑1 (MQ=255)                                                                                                                                                                                                      aatcg‑cCGGTTATGAAA‑TACAGAAACGATTTTTGTTCCATCTGATTGATCTTTATTTCTTTCCGGCCCATGCTAACAATTTTCAGCATCTTTTAAGGGCTTGTCTATCCCGCTCTTAAAATCTGAAGCGATATCCTCCTTTGCCTTGCTTCTTATCAAATAGGTTCCCCTGCGTGTAATCCGCTTCTAGATATAATTTGTGCTGTTTGTTATACTGTGCTCTGACTCCCACGCCGTTATTCCAGCCATTa                     <  1:63766/247‑1 (MQ=255)                                                                                                                                                                                                        gcg‑cCGGGATTGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCGTTTTGTCAGACGGTGCACTGACCCCCACGCCGTTATTCCAGCCATTACCt                  <  2:394963/251‑1 (MQ=255)                                                                                                                                                                                                          g‑cCGGGTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCGGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGCCATTACCttt                <  1:83264/251‑1 (MQ=255)                                                                                                                                                                                                              gggTATGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGCCATTACCTTTGa              >  1:71916/1‑250 (MQ=255)                                                                                                                                                                                                                  aTGAAA‑GACAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGCCATTACCTTTGAAACTg         >  1:677584/1‑251 (MQ=255)                                                                                                                                                                                                                          aCAGAAACGATTTTTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACTCTAACACTTTTCAGCATCGTTTAATGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTAATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTAAACGGTGCACTGACTCCCACGCCGTTATTCCAGCCATTACATTTGAAACTGAACTtct  >  2:755442/1‑251 (MQ=255)                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                              CGAGCAGGCGACAGATGATGTCAGCGCCACCCGCCTTTCCACCAGTCTGTCATTTGCGGAAGTTGAAAAAGAGGCAATTATTAACGCAGCCCAGGTCACAGGCGGTCGCATTCAGGAAATGTCGGCTTTACTTGGGATCGGCCGCACTACGCTGTGGCGG‑AAAATGAAGCAACATGGCATTGATGCAGGGCAGTTTAAGCG‑CCGGGTATGAAA‑GACAGAAACGATTTCTGATACATCAGAGTGATCTGTATTTCATTCCGGCGCACGCTAACAATTTTCAGCATCGTTTAAGGGCTTGTCTATCCCGCACTTAAAAGCTGAAGCGATATCCTCCGTTGACTTGCTTCTGATCAAAGAGGTTACCCTGCGTGTAATCCGCTTCGAGATAGAATGTGTGCTGTTTGTTATACTGTGCACTGACTCCCACGCCGTTATTCCAGCCATTACCTTTGAAACTGTACTTCT  >  NC_000913/1252775‑1253239

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑