| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,061,935 | G→A | S46N (AGC→AAC) | torD → | trimethylamine‑N‑oxide reductase‑specific chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,061,935 | 0 | G | A | 93.7% | 178.9 / NA | 63 | S46N (AGC→AAC) | torD | trimethylamine‑N‑oxide reductase‑specific chaperone |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (32/27); minor base C (2/2); total (34/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGTGGAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGT‑GTTT‑ACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGC‑TGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGC‑AGGGATGGAAACCAGCGG‑CAATTTCAACGAACCGGCAGATCATCTGGCGAT > NC_000913/1061691‑1062181 | ggtggAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGT‑GTTT‑ACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGGCGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAAcc < 1:344965/251‑1 (MQ=255)ggtggAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGT‑GTTT‑ACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAAc < 1:583541/250‑1 (MQ=255)ggtggAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGT‑GTTT‑ACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAAc < 1:574826/250‑1 (MQ=255)ggtggAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGT‑GTTT‑ACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAAc < 1:321291/250‑1 (MQ=255) ggAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGT‑GTTT‑ACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAAccgcc < 1:562218/251‑1 (MQ=255) ggAAATGGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGT‑GTTT‑ACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGATccgcc < 1:588715/251‑1 (MQ=255) tACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGT‑GTTT‑ACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTgcggcg > 1:448240/1‑251 (MQ=255) cggcccAGTGGAGCAGGTGACGGCGTTTAACGGCCACGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGT‑GTTT‑ACGACTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGCTGGCTGACTGGTTTTC‑GTTGCTGAAAACCGAACCGCCGCTCCCTGCGGCGGttg > 2:118944/6‑248 (MQ=255) aCAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGT‑GTTT‑ACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGaaaggg > 2:732938/1‑247 (MQ=255) agccggTGACGGCGTTTAACGGCCCCGTGGAGCTGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGGGACATCAGGACCACGCTGACAGCACAACAGATTGCCTGT‑GTTT‑ACGCCTGGCTAGCGCAGTTGTTCTACCTTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGGTGGCTGACTGGATTTC‑GTTGCTGAAAAACGAACCGCCGCTCCCTGcggcgggtgacggtcgggaa > 2:200493/5‑236 (MQ=255) gACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGT‑GTTT‑ACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTAt > 1:222576/1‑251 (MQ=255) cggggTTTAACGGCCCCGGGGAGATGGTGGCGCAGTGAGAATAGGCTCCCGCGTCGCAGGTGAAATCATGACCCCGCTGACAGCACAACAGATTGCCTGT‑GTTT‑ACGCCTGGCTAGCGCATTTGTTCCCCCGTGAGCGGGACGATGAACAACTGACGAAAATCGCCAGGGCGAAGAGGGCTGAAGGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTg < 2:143100/247‑1 (MQ=255) cGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGT‑GTTT‑ACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAACCGAACCGCCGCTCACTGCGGCGGTGAACGGGGTGGAAAACCGTCTTGccc > 2:612506/1‑250 (MQ=255) ttAACGTCCCCGTGGAGATGGAGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGT‑GTTT‑ACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGGACGAGCTGGGAAACCGTATTGCCACgg > 2:749265/1‑250 (MQ=255) ttAACGGCCCCGTGGAGAGGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGT‑TTTT‑ACGCCTGGCTAGCGCAGTTGTTCCCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACg < 1:575873/250‑1 (MQ=255) aaCGGCCCCGTGGAGATGGGGGCGAAGTGGGAAAATGTTCCCGCGTCGCAGGGAAAATCATGCCCACTCTGACAGCACAATAGATTGCTTTT‑GTTT‑ACGCTTGGTTACCGACTTTGTTTTCCGGTGAGCGGGACGATGAAAAACTGACTCAAACCACCAGTGCTCATATGGCTGAA‑GGTTTTCTGTTGCTAAAAACCAACCCGCCGCTCTCTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCt < 1:6257/250‑1 (MQ=255) ggCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGT‑GTTT‑ACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGAc > 1:21659/1‑250 (MQ=255) agaTGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGT‑GTTT‑ACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACg > 1:703508/1‑251 (MQ=255) cgcAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGT‑GTTT‑ACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTc > 1:457790/1‑251 (MQ=255) aatGTCCCCGCGTCGAGGGTGAAATCAGGCCCCCGCTGAAAGCACAACAGATTGCCTGG‑GTTT‑CCGCCTGGCTAGCGCAGTTGTCCCCCCGTGAGCTGGACGATGAACAACGGACGCAAATCGCCTGTGCGAAGAGGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGcc < 1:732938/250‑1 (MQ=255) gTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGT‑GTTT‑ACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATACCCGTCTGGAACTGGCcgcg > 1:741838/1‑251 (MQ=255) gtagCAGGTAAAATCATGTCCACGTTGACAGAACAACTGTTTGC‑TGTTGTTT‑CCGCCTGTCGAGCGCAGTTGTTCCCCCGTGAGCTGGAGGATGAAAAACGGACGAAAATCGCAAGGGCGCAGATGGTTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTg < 1:585613/248‑1 (MQ=255) aaactCATGCCCACGCTGACCGCACAACAGTGTGCCTGT‑GTTT‑CCGCAGGGCTGGCGCAGTTGTTCCCCCGGGAGATGGACAAGAAAAAACTGCCGAAAATCGCCGGTGCGCAGATGGTTGAAGGGTTTTC‑GTTGCGAAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGTCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGtt < 2:225990/247‑1 (MQ=255) aaaTCATGACCACGCTGACAGCACAACAGATTGCCTGT‑GTTT‑ACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGGCTTTTGCGGCCTGttt > 1:242406/1‑251 (MQ=255) cagtccccctgtGACAGAACAACAGATTGC‑TGT‑TTTTTCCGCCTGGCTAGCGCTGTTGTTCCCCTGGGGGCTGGAGGATGAACAACTGACGCAACTCGCCGGTTCGCAGAGGTCGGAGTGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCtga < 2:741619/240‑1 (MQ=255) cGCTGACAGCACAACAGTGTGCCTGT‑GTTT‑CCGCCGGGCTAGCGCAGTTTTTCCCCCGTGGGCGGGACGATAAACAACTGCCGCAAACCGCCTGTGCGCAGATGGCGGAATTTTTTTG‑TTTGCTAAAAAACGACCCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGac < 1:610416/251‑1 (MQ=255) cGCTGACAGCACAACAGATTGCCTGT‑GTTT‑ACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGCTGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGac > 1:567614/1‑251 (MQ=255) aCAGCACAACAGATTGCCTGT‑GTTT‑ACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGGGAACGAGCCGGAAAAACGGATTGCCCCCCTGACAGGACGTGAAGAGGCCCGGCTGGAACCGGCCGCGGCCTTTTGCGGCCTGttttttattgccggcaaac > 2:51099/1‑234 (MQ=255) gCACAACAGATTGCCTGT‑GTTT‑ACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAAACGTATTGCCACGCTGGCAGTACGGGCCGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGGCTGTTTCTGTTGACCGacaaacaaac > 2:465592/1‑249 (MQ=255) gCACAACAGATTGCCTGT‑GTTT‑ACGCCTGGCTAGCGCAGTTGTTCCCCCGTGAGCGGGACGATGAACAACTGACGCAAATCCCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCAAAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAgc < 1:51099/251‑1 (MQ=255) acaacaGTTTCCCGGT‑GTT‑‑ACCCCTGGCTAGGGCAGTTTTTCCCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTAAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAgcggc < 1:470137/251‑1 (MQ=255) ttGCCTGT‑GTTT‑ACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGGAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGC‑TGCCg > 1:516202/1‑251 (MQ=255) cTGT‑GTTT‑ACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGGGGACGAGCTGGGAAACCGTATTGCCACGCTGACAGTAAGTGACGGTGCCCGGCTGGAACCGGCCGCGGACTTTTGCGGCCTGTTTTTGGTGGCCGACAAACAAGAGGGGC‑TGCCGGATg > 2:793976/1‑251 (MQ=255) gt‑gtTT‑ACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAAATGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGGATTGCCACGCTGACAGGACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTTCGGCCTGTTTCTGATGAACGACAAACAAGCGGCGC‑TGCCGGATGc > 1:513142/1‑250 (MQ=255) gtTT‑ACGCTTGGCGAGCGAATTTGTCCCCCCGTGAGCGGGACGATGAACACCTGACGAAAACCGCCGGTGCGCAGAGGGCTGAATGGTTTCC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGC‑TGCCGTATGCATc < 1:380902/251‑1 (MQ=255) ttt‑ACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGGGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTTCGGCCTGTTTCTGATGACCGGCAAACAAGCGGCGC‑TTCCGTATGCATCg > 1:810743/1‑251 (MQ=255) cGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGGATTGCCACGCTGACAGTACGTGACGGAGCCCGGCTGGAACTGGCCGCGGACTTTTGCGGGCTGTTTCTGATGACCGACAAACAAGAGGCGC‑TGGCGTATGCATCgggcc > 2:782482/1‑248 (MQ=255) cTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGCACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTTCCACGCTTGCAGTACGTGGCGATGCCCGTCTGGGACTGGCCGCTGGCTTTTTCGGCCCGTTTCTGCTGACCGACACACCATCGGCGC‑TGCCGTATGCAttgggctaa > 1:92444/1‑242 (MQ=255) tGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGGACGCGCTGGAACACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGGCTTTTGCGGCCCGTTTCTGATGACCCCCCAACAAACGGCGCATCCCG‑ATGCATCgggccaca > 2:15812/1‑244 (MQ=255) ttCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAAACGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACACACAAGCCGCGC‑TGCCGTATGCATCGGCCTACAAACAGGACGAGCaa > 1:203387/1‑249 (MQ=255) ctcCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGC‑TGCCGTATGCATCGGCCTACAAACAGGACGGGCAag > 1:378132/1‑248 (MQ=255) ccccGTGAGCTGGACGATGACCACCTGACAAAAATCCCAAGTGCGCAGTGGGCTGAAGGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGC‑TGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGAt < 1:228246/250‑1 (MQ=255) cccGTGAGCGGGACGAAAAACAACGGACGAAAACCGCCAGTGCGCAGAGGGTTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGC‑TGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGAtt < 1:782482/251‑1 (MQ=255) cGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGGACGAGCTGGAAAACCGTATTGCCCCGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGGCTTTTGCGGCCTGTTTCTTATGACCGCCAAACAACCGGCGC‑TGCCGTAAGCCTCGGCATACAAACCGGAAGAGCAagggagta > 2:579439/1‑244 (MQ=255) cGTGAGCTGAACGATAAACAACTGACGCAAATCGCCAGTGCGCAGAGGGCTGAATGTTTTTC‑GTTGCAGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGC‑TGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTaa < 1:594460/251‑1 (MQ=255) tGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACCGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTTTGGTGACCGGCAAAAAAACCGGGC‑TGCCGGATGCATCGGCCTACAAAAAGGACGGGCAAGAGATTaacc > 2:393099/1‑249 (MQ=255) gaaagataaacaacggccacAAATCGCCAGTGCGAAGATGGCTGAATGTTTTCC‑GTTGTAAAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGC‑TGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGt < 1:431057/232‑1 (MQ=255) gacgagaaacaagTGACGAAAATCGCCAGGGCGCAGAGGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGC‑TGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGtt < 1:579439/244‑1 (MQ=255) gACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGAcc > 1:57612/1‑183 (MQ=255) aaacaccTGACGCAAGTCGCCGGTGCGCAGGGGGCGGAATGGTTTTG‑TTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGC‑TGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGa < 1:48340/250‑1 (MQ=255) caacTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCCCGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGGACGGCAAACAACCGGCGC‑TGCCGGATTCCTCGGCCTCCCAACAGGACGGGCAAGAGGTTAAAAGCTTTTTAggttaggg > 2:217091/1‑244 (MQ=255) acTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGGTTCTGATGACCGACAAACAAGCGGCGC‑TGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGc > 1:393368/1‑249 (MQ=255) gACGAAAATCGCCAGGGCGCATATGGAGGAATGTTTTCC‑GTTGCTAAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGC‑TGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGC‑AGGGa < 1:26204/251‑1 (MQ=255) aaccGCCAGTGCGCAGATGGCTGAATGTTTTTC‑GTTGCTAAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGC‑TGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGC‑AGGGATGGaaa < 1:612506/248‑1 (MQ=255) ccAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGGCAGTACGGGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGGCCGACCAACAAGCGGCGC‑TGCCGGCTGCATCGGCCTACAAACAGGACGAGCAAGCGATTAAATGCTTGttcattgtggacggggggggaacaagc > 2:261143/1‑226 (MQ=255) gCTGAATGGTTTGC‑GTTGCAAAAAAACGACCCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGC‑TGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGC‑AGGGATGGAAACCAGCGG‑CAATGTCAACGa < 2:102398/251‑1 (MQ=255) gaaaTGGTTTTC‑GTTGCTAAAAAACAAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGC‑TGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGC‑AGGGATGGAAACCAGCGG‑CAATTTCAACGAAc < 1:793976/249‑1 (MQ=255) aaTGGTTTTC‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCGCGCTGACAGTAAGTGCCGGTGCCCCTCTGGAACTGGCCGCGGACCTTTGCGGCCTGTTTCTGCTGACCGCCAACCAAGCGGCGC‑TGCCGTTTGGATCTGCCTACAAACAGGACGAGCAAGAGATTAACAGCTTGTTTGGTGAGGCCAGGG‑TGGAAACCACCGGGCAAttcaaagaa > 1:481981/1‑241 (MQ=255) c‑GTTGCTGAAAAACGAACCGCCGCTCACTGCGGCGGGGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGC‑TGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACCCTTGTTAGTTGAGGC‑AGGGATGGGAACCAGCGG‑AAATTTTAACCACCCCGCAGatcc > 2:525434/1‑249 (MQ=255) ttGCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCAAGCTGACAGTACGTGACGATGCCCGTCTGGGAATGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGC‑TGCCGTATGCACCGGCCTACAAAAAGGACGAGCAAGAGATAAAACACTTGTTAGTTGAGGG‑AGGGAGGGGAACCCGCGG‑CAATTTCAACGGAACGGCAGATCctct > 1:446452/1‑251 (MQ=255) gtcTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGC‑TGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGC‑AGGGATGGAAACCAGCGG‑CAATTTCAACGAACCGGCAGATCATCt < 1:359045/248‑1 (MQ=255) gCTGAAAAACGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCgg > 1:384254/1‑111 (MQ=255) aaaaCCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGC‑TGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGC‑AGGGATGGAAACCAGCGG‑CAATTTCAACGAACCGGCAGATCATCTGGCGat < 1:241112/251‑1 (MQ=255) | GGTGGAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGTTCCCGCGTCGCAGGTGAAATCATGACCACGCTGACAGCACAACAGATTGCCTGT‑GTTT‑ACGCCTGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGGTTTTC‑GTTGCTGAAAAGCGAACCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGC‑TGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGC‑AGGGATGGAAACCAGCGG‑CAATTTCAACGAACCGGCAGATCATCTGGCGAT > NC_000913/1061691‑1062181 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |