| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,636,925 | G→C | R77P (CGC→CCC) | creC → | sensory histidine kinase CreC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,636,925 | 0 | G | C | 98.7% | 279.2 / ‑2.9 | 77 | coding (230/1425 nt) | creC | sensory histidine kinase CreC |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (35/41); minor base . (1/0); total (36/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.68e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.08e-01 | |||||||||||
AGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGT‑TGCTGGGCTATTTTTTACTGGTGG‑CG‑GTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGCC > NC_000913/4636679‑4637148 | aGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGT‑TGCTGGGCTATTTTTTACTGGTGG‑CG‑GTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCcccc < 1:72112/250‑1 (MQ=255) cTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGT‑TGCTGGGCTATTTTTTACTGGTGG‑CG‑GTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGGTTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGGTTAATCAGCTACAA‑CATCCCCCGttt > 1:466397/1‑251 (MQ=255) cTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGT‑TGCTGGGCTATTTTTTACTGGTGG‑CG‑GTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGGTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGGCCCGGTTTGCTCTCTGGGGACCCAACGCCTGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGttt > 1:613052/1‑251 (MQ=255) gAGGGGCCTGTAATGCGTATCGGCATGCGGTTGT‑TGCTGGGCTATTTTTTACTGGTGG‑CG‑GTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGttt < 1:669391/249‑1 (MQ=255) gAGGGGCCTGTAATGCGTATCGGCATGCGGTTGT‑TGCTGGGCTATTTTTTACTGGTGG‑CG‑GTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTcg < 1:609744/251‑1 (MQ=255) gTAATGCGTATCGGCATGCGGTTGT‑TGCTGGGCTATTTTTTACTGGTGG‑CG‑GTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAat < 1:434946/249‑1 (MQ=255) gTAATGCGTATCGGCATGCGGTTGT‑TGCTGGGCTATTTTTTACTGGTGG‑CG‑GTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGGTGCTGGCGGAGCTGGCGCGTCCCGATTTGCGCTCTGGGGACCCCACGCATGGGCAAATGGCGCAGGCGTTTAATCACCTACAA‑CATCCCCCGTTTCGCGCCAatat > 1:238222/1‑251 (MQ=255) gTAATGCGTATCGGCATGCGGT‑GTGTGCTGGGCTATTTTTTACTGGTGG‑CG‑GTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAatat < 2:631238/251‑1 (MQ=255) aaTGCGTATCGGCATGCGGTTGT‑TGCTGGGCTATTTTTTACTGGTGG‑CG‑GTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCg < 1:332255/251‑1 (MQ=255) aTGCGTATCGGCATGCGGTTGT‑TGCTGGGCTATTTTTTACTGGTGG‑CG‑GTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCgg < 2:318162/251‑1 (MQ=255) cGTATCGGCATGCGGTTGT‑TGCTGGGCTATTTTTTACTGGTGG‑CG‑GTGGCAGCCTGGTTCGTAATGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTTGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAAACTTC‑CCCGTTTCGCGCCAATATCggggg > 1:25807/1‑248 (MQ=255) gTATCGGAATGTGGTTGT‑TGCTGGGCTATTTTTTA‑TGGTGGGCG‑GTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCTAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGGCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGc < 2:699372/251‑1 (MQ=255) aTGCGGTTGT‑TGCTGGGCTATTTTTTACTTGTGG‑CG‑GTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGATGGGACGTTTATCGACCCCGCATCGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCGCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACaa < 1:26993/251‑1 (MQ=255) ggTTTT‑TGCGGGGCTATTTTTTACTGGTGG‑CG‑GTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGTAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTg < 2:266955/251‑1 (MQ=255) ggTTGT‑TGCTGGGCTATTTTTTACTGGTGG‑CG‑GTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTg > 1:221681/1‑251 (MQ=255) ggTTGT‑TGCTGGGCTATTTTTTACTGGTGG‑CG‑GTGGCAGCCTGGTTCGTACTGGCCATTATTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTg < 1:35445/251‑1 (MQ=255) tgt‑ttCTGGGCTATTTTTTACTGGTGG‑CG‑GTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGCAGTGGATCGACCCCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCTAACGCATGGGCAACGGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTgcg < 2:584447/250‑1 (MQ=255) tgt‑tgCTGGGCTATTTTTTACTGGTGG‑CG‑GTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTgcg < 1:362578/250‑1 (MQ=255) tgt‑tgCTGGGCTATTTTTTACTGGTGG‑CG‑GTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTgcg < 1:596426/250‑1 (MQ=255) ttcTGGGCTATTTTTTACTGTGGG‑CG‑GTGGCAGCCTGGTTCGTACTGGCCATTGTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCaa < 2:812558/248‑1 (MQ=255) cTATTTTTTACTGGTGG‑CG‑GTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGGTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATc > 1:79404/1‑251 (MQ=255) aTTTTTTACTGGTGG‑CG‑GTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCa < 1:583741/250‑1 (MQ=255) ttttACTGGGGG‑CGAGTG‑CAGCCTGGATCCTACTGGCAATTTTTGATGAAGAAGTTAAACCGCGCGTGCGAAGAGCAACGGAGGGGACGTTGATTGACACCGCAACGTTGCTGGCGGAGATGGCGCGTCCCGATTTGCTCTCTGGGGACACAACGCATGGGGACCTGGCGCCGGCGGTTTATCAGCTTCAA‑CATCCCCCGGTTCGCGCCCACATCGGTGGCATTAAACAAGTGGGCAATggaattcctgtc > 2:109612/1‑240 (MQ=255) cAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCCACTGGCGCCGGCGTTTAATCAGCTACAA‑CATCCCCCGt > 1:654019/1‑183 (MQ=255) cAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGAGCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCGCTCTGGGGACACAACGCATGGGCAACTGGTGCAGGCGTTGAATCAGCTACAA‑CATCCCCCGt < 2:654019/183‑1 (MQ=255) tGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCa > 1:66944/1‑250 (MQ=255) tCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGt < 2:49014/250‑1 (MQ=255) tCGTACTGGCCAGTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGt < 2:14654/250‑1 (MQ=255) gTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTAtt < 1:669458/251‑1 (MQ=255) gCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGa < 1:567390/251‑1 (MQ=255) ccATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGAt < 1:547325/251‑1 (MQ=255) tCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAAt > 2:276922/1‑251 (MQ=255) cAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAAt > 1:117460/1‑250 (MQ=255) gaagTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGGGCGCAATGAATATCATGTCTATATGCCCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGc > 2:346337/1‑251 (MQ=255) gaagTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CAGCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGc < 2:605146/251‑1 (MQ=255) aagTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCAGCTTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGAATTAACAAAGTGCGCCATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGcc > 1:807807/1‑251 (MQ=255) agTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAATGCGCAATGAATATCAAGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCg > 2:176536/1‑251 (MQ=255) gggCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAgg > 1:696478/1‑251 (MQ=255) tGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGCACCCAACGCACCGGCAACTGGCCCAGGCGTTTAATCAGCTACCA‑CATCCCCCGTTTCGCGCCCATATCGGTGGCATTAACAAAGTGCGCAATGAATATAATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGattat > 1:475953/1‑251 (MQ=255) gCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGattatt > 1:113009/1‑251 (MQ=255) agCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCACCGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCCTTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGAATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTAGCGCt > 1:44068/1‑251 (MQ=255) cgggggggACGTTGATCGCCCCCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAAt < 2:221681/247‑1 (MQ=255) cGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAAt < 1:596933/251‑1 (MQ=255) gAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCCACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGAACAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATg > 1:423928/1‑250 (MQ=255) gggggACGTTGATCCACCCCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCTTGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTGCGCGCCAATATCGGTGGCATTAACAAATTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGGTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGAc < 2:668828/250‑1 (MQ=255) aGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGTCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCACTATCGGTGGCATTAACAAAGTTCGCAATGCATATCCTGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATgcc > 1:60/1‑249 (MQ=255) aGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATAGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGAc < 1:492508/251‑1 (MQ=255) ggggACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATgccg > 2:474221/1‑248 (MQ=255) gACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATg < 1:622752/179‑1 (MQ=255) gACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATg > 2:622752/1‑179 (MQ=255) tGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCt < 1:795315/250‑1 (MQ=255) acacCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAACGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGATCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTTACGTTg > 1:470676/1‑251 (MQ=255) cacCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGc > 1:491959/1‑251 (MQ=255) cGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCCGGAATGACGTCTGGCTAACGTTGCGTg < 1:120195/251‑1 (MQ=255) aaCGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTATGGCTAACGTTGCGTGGTc > 2:514676/1‑251 (MQ=255) aaggtgagggCGGAGCCGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCCTGGGCAACCGGCGCAGGCGTTCAATCAGCTACAA‑CATCCTCCGTTTCGCGCTAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTAGATGACCGATGCGCAGGGCAAAGTATCGCTCGATTCGGCAAATAAAGCCGTTGGACAGGATCATCCGCGCTGGAACGACGTCGGGCTAACGTTGCGTGGTCa < 2:60/243‑1 (MQ=255) cGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCGCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAg < 1:412858/251‑1 (MQ=255) tgCGGACCTGGCCCTTCCCGATTTGCTCTCGGGAGCCCCAACGCATGGGCACCTGGCTCTGTCGATTAATCAGCTACAA‑CATCCCCCGTTTCGCATCAATTTCTGTTGCCTTAACAAAGTTCGCAATGAAGATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAAGAAAGCCGTTGGACAGTATTATTCGCGCTAGAAGTACGTCACGCTTACGTTGCGTTGTTAGTAtttt < 2:582912/249‑4 (MQ=255) cgTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGtt > 2:684852/1‑251 (MQ=255) gTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGTCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTg < 2:466397/251‑1 (MQ=255) gcccGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCGGCACGTTGc > 2:488290/2‑251 (MQ=255) aTTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAAt < 1:163946/251‑1 (MQ=255) ttGCTCTCTGGGGACCCAACGCATGGGCAACTGGAGAAGGCGTTTAATCATCTACAA‑CATCCCCCTTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGAAATAAATATCATGTCGAGATGACCGATTCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAATCCGTTGGACAGGATTAGTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGTTGCGCGCAGCTCGTTGCAAAATc < 2:664643/250‑1 (MQ=255) ctctGGGGACCCAACGCATGGGCACCTGGCGCAGGCGTTTACTCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATCTCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTAGCGCTGGACTGACGTCTGGATAACGTTGCGTGGTCAGAATGGTGCGCGCAGCACGTTGCAAAATCCTGCCg > 2:388745/1‑251 (MQ=255) tGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGCGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATc > 1:332160/1‑251 (MQ=255) ggggACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATcc > 1:264060/1‑251 (MQ=255) ggggACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATcc > 1:62340/1‑251 (MQ=255) ggggACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGACGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATcc > 1:208399/1‑251 (MQ=255) gggACCCAACGCAGGGGCAACGGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCTGTGGCACTAACAAAGTGCGCAATGAATAACATGTCTATATGACCGTTGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCTTTGGACAGGATTATTCGCGCTGGAATGACGTCGGGCTAACGTTGCGTGGCCAGTATGGTGCGCGCAGCAAGTTGCAAAATCCTGCCGATccc < 2:26198/251‑1 (MQ=255) cccAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCCAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGCTCCCGaa > 2:763889/1‑250 (MQ=255) ccAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CAGCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAg < 1:708300/251‑1 (MQ=255) tGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCtgtg > 1:21791/1‑250 (MQ=255) aaCTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGctgtat > 2:46994/1‑251 (MQ=255) aaCTGGCGCAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGatgtat < 1:276922/251‑1 (MQ=255) cgcAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGcc < 1:474221/251‑1 (MQ=255) cgcAGGCGTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGcc < 1:462813/251‑1 (MQ=255) gTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTAt < 2:549607/104‑1 (MQ=255) gTTTAATCAGCTACAA‑CATCCCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTAt > 1:549607/1‑104 (MQ=255) | AGCCTGAGGGGCCTGTAATGCGTATCGGCATGCGGTTGT‑TGCTGGGCTATTTTTTACTGGTGG‑CG‑GTGGCAGCCTGGTTCGTACTGGCCATTTTTGTCAAAGAAGTTAAACCGGGCGTGCGAAGAGCAACGGAGGGGACGTTGATCGACACCGCAACGTTGCTGGCGGAGCTGGCGCGTCCCGATTTGCTCTCTGGGGACCCAACGCATGGGCAACTGGCGCAGGCGTTTAATCAGCTACAA‑CATCGCCCGTTTCGCGCCAATATCGGTGGCATTAACAAAGTGCGCAATGAATATCATGTCTATATGACCGATGCGCAGGGCAAAGTATTGTTCGATTCGGCAAATAAAGCCGTTGGACAGGATTATTCGCGCTGGAATGACGTCTGGCTAACGTTGCGTGGTCAGTATGGTGCGCGCAGCACGTTGCAAAATCCTGCCGATCCCGAAAGTTCTGTGATGTATGTTGCC > NC_000913/4636679‑4637148 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |