Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,405,840 +T coding (802/939 nt) lrhA ← DNA‑binding transcriptional dual regulator LrhA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,405,8401.T97.4% 130.9 / ‑5.1 39Y268N (TAT→AAT) lrhADNA‑binding transcriptional dual regulator LrhA
Reads supporting (aligned to +/- strand):  ref base . (0/0);  major base T (21/17);  minor base A (1/0);  total (22/17)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01

TATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATACAAGAGGGATC  >  NC_000913/2405598‑2406084
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                         
tATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTCTCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGCTTATGGGAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTTTTACTGGACGGCTCATATGCACAGc                                                                                                                                                                                                                                                    >  1:737475/1‑251 (MQ=255)
   gCGATGAAGGATTTTTACTAAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCa                                                                                                                                                                                                                                                   <  2:607389/250‑1 (MQ=255)
          aGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCgg                                                                                                                                                                                                                                          <  1:411770/251‑1 (MQ=255)
             aTTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTAt                                                                                                                                                                                                                                       <  1:265082/251‑1 (MQ=255)
                 ttACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCCGCCGTCGATTATTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGCCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAACTCATTATTACTGTACGGATCATAAGCACAGCAAATTTTCGGTATCAgg                                                                                                                                                                                                                                   >  2:610618/1‑251 (MQ=255)
                      aaaaaaaaGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAg                                                                                                                                                                                                                                <  1:427938/249‑1 (MQ=255)
                                      gggTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGCTTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTCGCTCTCCATCCCCTGATAGATCACCTGGGCCAGCTCCTTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGGAGCGGCGGTTAAGcctcc                                                                                                                                                                                                                >  2:12994/1‑247 (MQ=255)
                                          ttAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGACTCAGAAATTAACTATCGTCCGTCGATTACTCGCTATCCCTTTCAATCTAAAATGAATCATCCCCTTCCGGCGCAGACATTGGGCTGTATTGCAAAGGTTTATGGTAGCTCTCCATCGCCTGATCGATCCCCTGGGCCAGCACCTTTTTACTTGCAGGATCATATGAACGGCAAATATTCGGTATCAGGTCGcggcgggtacccaaccacccc                                                                                                                                                                                                           >  2:470560/1‑236 (MQ=255)
                                           tAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGcggcgggaatacaacttccccc                                                                                                                                                                                                          >  2:129979/1‑235 (MQ=255)
                                                                  ttttACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACCCCACTCAGCACACGCCGGTCCGGGcc                                                                                                                                                                                 >  1:689614/1‑250 (MQ=255)
                                                                         cTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAACCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCctcatc                                                                                                                                                                         >  1:546592/1‑251 (MQ=255)
                                                                                ctcAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTc                                                                                                                                                                                                      <  1:554730/217‑1 (MQ=255)
                                                                                  cAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCg                                                                                                                                                                  <  1:249482/249‑1 (MQ=255)
                                                                                    ggAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAACCACCTACTCCACTCCGCCCACCCCGGGCCGGGGTCATCATCCCAAACGGCCt                                                                                                                                                              >  2:782430/1‑251 (MQ=255)
                                                                                          atctatcGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGt                                                                                                                                                        >  1:129161/1‑251 (MQ=255)
                                                                                              atcGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCa                                                                                                                                                      <  1:46563/249‑1 (MQ=255)
                                                                                              atcGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAACCATCTACCCCACTCCACCACCGCAGGGCCGGGGTCATCAACTCCACCGCCCATGCCgccccc                                                                                                                                                    >  2:679161/1‑246 (MQ=255)
                                                                                                  tccgtcGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGACCTCTACTCCACACAGCCCCCCCCGGTCCCGGCTCAACATCTCCACCCGCCTTCCCGTCACCCCa                                                                                                                                                 >  2:275447/1‑250 (MQ=255)
                                                                                                            aCTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCtt                                                                                                                                       <  1:574314/250‑1 (MQ=255)
                                                                                                             cTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTTCTCCACTCAGCACACGCAGGGCCGGGCTCCTCCTCTCAACCGGCCTTGCCCGCACGCCCAGACCGGCtttt                                                                                                                                     >  2:128819/1‑250 (MQ=255)
                                                                                                                               caacaaTGAATCATCCCCGTCCGGAGCAGACATTGGGCTGTAGTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGc                                                                                                                   <  1:5876/250‑1 (MQ=255)
                                                                                                                                              cccTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCCCTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCCCGCCCAAACCGGCCTTCACTGCCGCCCGAACGGCCGGGAGCGTCgcggcg                                                                                                   >  2:365457/1‑251 (MQ=255)
                                                                                                                                                  tCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACTAACGGCCGGAAGCGTCGAGGCGACa                                                                                                <  1:280777/250‑1 (MQ=255)
                                                                                                                                                  tCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGAc                                                                                                 <  1:129979/249‑1 (MQ=255)
                                                                                                                                                          aGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCCTATACTCCACTCAGCCCACGCAGGTCCGGGGTCATCAACTCAACCGGACTGGCGGGACCGCCAAGAACGGGTTTACACGCCGCACGAAAGGCCGGAAggggccgggggaacaaagcacg                                                                                        >  2:153309/1‑229 (MQ=255)
                                                                                                                                                              aTTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCCGAAGCGTCGAGGCGACATAAGCCAGTCGcc                                                                                  >  1:630440/1‑251 (MQ=255)
                                                                                                                                                                                       ggTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGt                                                         <  1:269978/251‑1 (MQ=255)
                                                                                                                                                                                                ccATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCa                                                 <  1:128819/250‑1 (MQ=255)
                                                                                                                                                                                                     gCCTGAAAGACCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTAGCAGGTAGCGGCGGTAAGCCATCTACTCCCCGCAGCACACGCAGGACCGGGCTCATCATCCCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCatat                                           <  2:219215/251‑1 (MQ=255)
                                                                                                                                                                                                          aTAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTCAGACATCTACTCCACTCAGCACACGCAGGTCCGGGCTTATCATCTCCACCGGCCTTGCCCTCCCGCCAAGACCCGCCTTCACTGCCGCCCGAACTGCCCGGAGCGGCGAGGCGGCAATAACCATTCGCCAAGGAAACTCTGCCTTATTAAGAGTGACCAGCCCCACATcgcgg                                      >  2:34286/1‑250 (MQ=255)
                                                                                                                                                                                                           tAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCCCTGCCGCACGAACGGCCGGAAGCGTCGAGGCGGCATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATAGCGa                                      >  1:24247/1‑250 (MQ=255)
                                                                                                                                                                                                            aGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCAATGCCGCACGAACGGCCGGAAGCGTCGAAGCGACATAAACCCGTCGCCATGGGATATATGCTTTATTAAACGTCGCCAGCACCCAATCGCGaa                                     >  1:557015/1‑250 (MQ=255)
                                                                                                                                                                                                                cACCTGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCCCACGCAGGTCCCGGCTCATACACTAAACCGGCCTTGCCGTCACGCCAAGACCGGGCTTCACTGCCCCCCGAACGGCCGGAAGGCTCGCGGCTGCATAAACCAATCCCCCTGGGAAATCTGGTTTATTAAACGCCGCCaaaccccaaacaccaaacggg                                >  2:547821/1‑231 (MQ=255)
                                                                                                                                                                                                                  ccTGTGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCt                              <  1:773235/251‑1 (MQ=255)
                                                                                                                                                                                                                    tGGGCCAGCTCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACAAGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCCAGACCGGCTTTCACTGCCGCCCGAACGGCCGGAAGCGTCGAGGCGAACTAAGCCCGTCGCCATGGGATATCTGCTTTATTAAGCGTCGCCCGCACCATATCGCGAAACGGGCt                              >  1:167502/1‑249 (MQ=255)
                                                                                                                                                                                                                             tCATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCCCACGCAGGGCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGCGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATcc                    >  1:261114/1‑250 (MQ=255)
                                                                                                                                                                                                                              cATTATTACTGGACGGATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCGCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAg                  <  1:79737/251‑1 (MQ=255)
                                                                                                                                                                                                                                            ggATCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATACAAGAGGGa    <  1:365457/251‑1 (MQ=255)
                                                                                                                                                                                                                                              aTCATATGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGGTCATCCAGCAATACAAGAGGGATc  >  1:126546/1‑251 (MQ=255)
                                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                                         
TATGCGATGAAGGATTTTTACTAAAAAAAAGCCGCTGGGGTTTAAAACACCCCCAGCGGCTCGTTTTTTACACTATTGTCTCAGGAATTATCTATCGTCCGTCGATTACTCGATATCCCTTTCAATCAACAATGAATCATCCCCTTCCGGAGCAGACATTGGGCTGTATTGCCACGGATTATGGTAGCTCTCCATCGCCTGATAGATCACCTGGGCCAGCTCATTATTACTGGACGGATCATAGCACAGCAAATATTCGGTATCAGGTAGCGGCGGTAAGCCATCTACTCCACTCAGCACACGCAGGTCCGGGCTCATCATCTCAACCGGCCTTGCCGTCACGCCAAGACCGGCTTTCACTGCCGCACGAACGGCCGGAAGCGTCGAGGCGACATAAGCCAGTCGCCATGGAATATCTGCTTTATTAAGCGTCGCCAGCACCATATCGCGAAACGGGCTAGGATCATCCAGCAATACAAGAGGGATC  >  NC_000913/2405598‑2406084

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: