| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 70,371 | T→C | intergenic (‑323/‑16) | araB ← / → araC | ribulokinase/DNA‑binding transcriptional dual regulator AraC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 70,371 | 0 | T | C | 97.2% | 235.9 / NA | 73 | intergenic (‑323/‑16) | araB/araC | ribulokinase/DNA‑binding transcriptional dual regulator AraC |
| Reads supporting (aligned to +/- strand): ref base T (0/1); major base C (37/33); minor base A (2/0); total (39/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.96e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.80e-01 | |||||||||||
TCTTATGGATAAAAATGCTATGGCATAGCAAAGTGTGACGCCGTGCAAATAATCAATGTGGACTTTTCTGCCGTGATTATAGACACTTTTGTTACGCGTTTTTGTCATGGCTTTGGTCCCGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTGGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGTGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAACGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑ATTGAGGCCAACGGTTATCTCGATTTTTTTATCGAC‑CGACCGCTGGGAATGAAAGGTTATATTCTCAAT‑CTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGT > NC_000913/70128‑70606 | tCTTATGGATAAAAATGCTATGGCATAGCAAAGTGTGACGCCGTGCAAATAATCAATGTGGACTTTTCTGCCGTGATTATAGACACTTTTGTTACGCGTTTTTGTCATGGCTTTGGTCCCGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGt > 1:945614/1‑250 (MQ=255) tATGGATAAAAATGCTATGGCATAGCAAAGTGTGACGCCGTGCAAATAATCAATGTGGACTTTTCTGCCGTGATTATAGACACTTTTGTTACGCGTTTTTGTCATGGCTTTGGTCCCGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTa < 1:48662/248‑1 (MQ=255) tGGATAAAAATGCTATGGCATAGCAAAGTGTGACGCCGTGCAAATAATCAATGTGGACTTTTCTGCCGTGATTATATACACTTTTGTTACGCGTTTTTGTCATGGCTTTGGTCCCGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCCGTAAAAGACGCAGTGACGGCATTGTCTGATGCAATATGGCCCATTGGTTTCTTCTCTGACTGGCGGGAGTATGac > 2:16050/1‑249 (MQ=255) gATAAAAATGCTATGGCATAGCAAAGTGTGACGCCGTGCAAATAATCAATGTGGACTTTTCTGCCGTGATTATAGACACTTTTGTTACGCGTTTTTGTCATGGCTTTGGTCCCGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCTGGAGTATGAAAAg < 1:780488/251‑1 (MQ=255) aaaaGGCTATGGACTAGCAAAGTGTGACGACGTGCAATTAATCAATGTGGACTTTTCTGCCGTGATTATAGACACCTTTGTTTCGCGTTTATGTCATGGCTTTGGCCCCGCTTTGTTACAGAATGCAGTGAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGACAGTAAAAGACGCAGTGACGGAAATGTCTGATGCAAGATGGGCAATTGGTGTCTTCTTGGAATGGCGGGAGAATGAAAAGTATg < 1:795587/251‑1 (MQ=255) ggCATAGCAAAGTGTGACGCCGTGCAAATAATCAATGTGGTCTTTTCTGCCGTGATTATAGACACTTTTGTTACGCGTTTTTGTCATGGCTTTGGTCCCGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAgcg < 1:16050/250‑1 (MQ=255) ggCATAGCAAAGTGTGACGCCGTGCAAATAATCAATGTGGACTTTTCTGCCGTGATTATAGACACTTTTGTTACGCGTTTTTGTCATGGCTTTGGTCCCGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAgcgc > 1:600877/1‑251 (MQ=255) aTAGCAAAGTGGGACGCCGTGCAAATAATCAATGTGGACTTTTCTGCCGTGATTATAGACACTTTTGTTACGTGTTTTTGGCATGGCTTTGGTCCCGCTTTGTTACAGAATGCTTTTAATAAGCGTGGTTACCG‑GTTTGGTTAGCGAGAAGAGTCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCaaa < 1:920834/251‑1 (MQ=255) aaaGTGTGACGCCGTGCAAATAATCAATGTGGACTTTTCTGCCGTGATTATAGACACTTTTGTTACGCGTTTTTGTCATGGCTTTGGTCCCGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGAt < 1:984034/251‑1 (MQ=255) aaGTGTGACGCCGTGCAAATAATCAATGTGGACTTTTCTGCCGTGATTATAGACACTTTTGTTACGCGTTTTTGTCATGGCTTTGGTCCCGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATc < 1:53138/251‑1 (MQ=255) gtagactagcaatgacacAATGTGGACTTTTCTGCCGTGATTATAGACACTTTTGTTACGTTTTTTTGTCATGGCTTGGGTCCCGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTTACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGTTAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCctg < 2:386886/233‑1 (MQ=255) gACGCCGTGCAAATAATCTATGTGGACTTTTCTGCCGTGATTATCGTCACCTTTGTTACGCTTTTGTGTCATGTCTTTGGTCCCGCTTTGTTACAGAATTATTTTAATAAGCGGTGTTACCG‑GTTTGGTTAGCGAGAATAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATTGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCctgc < 1:566832/251‑1 (MQ=255) gACGCCGTGCAAATAATCAATGTGGACTTTTCTGACGTGATTATAGACACTTTTGTTACGCGTTTTTGTCATGGATTTGGTTCCACTTTGTTACAGAATGCTTTTAATAAGTGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGCCGGCAGTGTTTGAGGCAAAATGGACAATTGGTTTATGTTCTGGTTGGCGGGTGTATGAAAAGGATGGCTgtgtctatgactgaatacctgc > 2:198652/1‑230 (MQ=255) gCAAATAATCAATGTGGACTTTTCTGCCGTGATTATAGACACTTTTGTTACGCGTTTTTGTCATGGCTTTGGTCCCGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGa < 1:667881/251‑1 (MQ=255) gtgGACTTTTCTGCCGTGATTATAGACACTTTTGTTACGCGTTTTTGTCATGGCTTTGGTCCCGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGAGACTCGTTTaatg < 1:732763/251‑3 (MQ=255) cTTTTCTGCCGTGATTATAGACACTTTTGTTACGCGTTTTTGTCATGGCTTTGGTCCCGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCAt > 1:176331/1‑251 (MQ=255) tCTGCCGTGATTATAGACACTTTTGTTACGCGTTTTTGTCATGGCTTTGGTCCCGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCtg < 1:380897/250‑1 (MQ=255) gTGATTATAGACACTTTTGTTACGCGTTTTTGTCATGGCTTTGGTCCCGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGAGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCCTCTGGAGGCgg > 1:920822/1‑251 (MQ=255) gATTATAGACACTTTTGTTACGCGTTTTTGTCATGGCTTTGGTCACGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGAGGGAGGATGAAAAGTATGGCTGTAGCGCACAATGATCCCCCGCTGCCGGGGTACTCGGTTattacccattcgtgggcgggg > 2:43314/1‑231 (MQ=255) gATTATAGACACTTTTGTTACGCGTATTTGTCATGGCTTTGGTCCCGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGGGTATGAAAAGTATGGCTGAAGCGCACAATGATCCCCTGCTGCCGGGATACTCGATTAATGCCCATCTGGTGGCgggg > 1:707550/1‑250 (MQ=255) ataGACACTTTTGTTACGCGTTTTTGTCATGGCTTTGGTCCCGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGGAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTa > 1:441589/1‑250 (MQ=255) acacTTTTGTTACGCGTTTTTGTCATGGCTTTGGTCCCGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGcc < 1:504924/251‑1 (MQ=255) cacTTTTGTTACGCGTTTTTGTCATGGCTTTGGTCCCGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGCCg < 1:125225/251‑1 (MQ=255) ggTTTTTGTCATGGCTTTGGTCCCGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑ATTGAGGCCAACg < 2:258970/250‑1 (MQ=255) gTTTTTGTCATGGCTTTGGTCCCGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGGATGAAAAGTATTGGTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTTATGCCCATCTGGTGGCGGG‑ttttaacccgatttggggccactg > 2:163689/1‑230 (MQ=255) gTTTTTGTCATGGCTTTGGGCCCGTTTTGTTAAAGAATGCGTTTAATAAGCGGGGTTTCCG‑GTTTGGGTAGCGAGAATAGCCAGGAAAAGACGCAGTTACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑ATTGAGGACAACgg < 2:461978/251‑1 (MQ=255) ttttGTCATGGCTTTGGTCCCGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGGATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGACG‑GTTGAGGCCAACGGtt > 1:235800/1‑251 (MQ=255) ttGTCATGGCTTTGGTCCCGCTTTGTTACAGCATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACCATTGGTTTCTTCTCTGAATGGCGGGAGTATGGAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTTCCGGGGAACTCGCTTAATGCCCATCTGGGGGGGGG‑TTTACAC‑CCG‑ATTTTGGCCAACGGTTAt > 2:193338/1‑251 (MQ=255) tGTCATGGCTTTGGTCCCGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGGGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGGTACTCGTTTAATGCCCATCTGGTGGCGGG‑GTTA‑AAGCCG‑ATTGAGGcccaagggtatc > 1:990605/1‑241 (MQ=255) tGTCATGGCTTTGGGCCCGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑ATTGAGGCCAACGGTTAt < 1:896872/250‑1 (MQ=255) aTGGCTTTGGTCCCGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑GTTA‑ACGCCG‑GTTGAGGCCAAAGGGTATCTCgg > 1:879126/1‑250 (MQ=255) tGGTCCCGCTTTGTGACAGAATGCTTTAAATAAGCGGGGTTACCGAGTTGG‑TTAGCGAGAAGAGCCAGTAAAAGGCGCAGTGACGGCAATGTCTGATGCAATATGGACAAGTGGTTTCTTCTCTGAATGGCGGAAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCCTCTGGTGGCGGA‑TTTA‑ACGCCG‑ATTGAGGCCAACGGTTATCTCGAttgttt < 2:1203/250‑1 (MQ=255) ccGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACTG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGGGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAATCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑ATTGAGGCCAACGGTTATCTCGATGTTTTTATcga < 2:945456/251‑1 (MQ=255) ccGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑GTTTAGGCCAACGGTTTTCTCGGTTTTTTTTTcgg > 1:749589/1‑250 (MQ=255) ccGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGGATGGCTGTAGCGCAAAATGATCCCCCGCTGCCGGGGTACTCGGTTAATGCCCATCTGGTGGCGGGGTTTA‑CCCCCG‑TTTAAGGCCAACGGTT‑TCCCGGttttttttatcg > 2:332508/1‑246 (MQ=255) gCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGCGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTCTGAAAAGAAAGGCTGAAGCGCAAAATGTTCCCCTGCTGCCGGGGTAACAGTTTAATCCCCATTTGGTGGCGGG‑TTTA‑ACGACG‑ATGGAGGCCAAAGGTTATCTCGGtttttttttcctcc > 2:307309/1‑244 (MQ=255) cTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGAGCAAAATGATCCCCTGCTGCAGGGATTCTCGTTTAATGCCCATCTGGTGGCGGG‑GTTA‑ACCCCG‑ATTGAGGCCAACGGGTTTTTCGAttttttttttgcccg > 1:783817/1‑243 (MQ=255) tGTTACAGAATGCTTTTAATAAGCGGGGATACAG‑GTTTGATTAGCGAGAAGAGCCAGTAAAAGAAGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGAGGGAGGATGAAAAGTATGACTGAAGAGCAAAATGATCCCCTGCTGCCGGGATAATCGGTTAATGCCCATATGGTGGCGGG‑CTTA‑ACGCAG‑GTTGAGGCCAAAGGTTATATCGGGTTTTTTATCgac‑agacc > 1:850027/1‑251 (MQ=255) cAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGGGAATATCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTGCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGGGGCGGG‑TTTA‑ACGCCG‑ATTGAGGCCAACGGTTATCTCGATTTTTTTATCGAC‑CGACCGCTgg < 2:920822/251‑1 (MQ=255) cAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGGGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑GTTA‑ACGCCG‑ATTGGGGCCCACGGTTATCTCGGTTTTTTTTTCGAC‑CCACCCCTgg > 1:122616/1‑251 (MQ=255) cTTTTAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCCAAATGATCCCCTGCTGCCGGGATACTCGTTTAATTCCCATCTGGGGGCGGG‑TTTA‑ACGCCG‑ATTGAGGCCAACGGGTATCTCGAtttttttttccgccggacgatggggaata > 1:594829/1‑228 (MQ=255) gttAATAAGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑ATTGAGGCCAACGGTTATCTCGATTTTTTTATCGAC‑CGACCGCTGGGAATGaaa < 2:176331/249‑1 (MQ=255) taataaGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGGCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTTAATGGCGGGAGTATTAAAAGTATGGCTGTAGCGCAAAATGATCCCCTGCTGCCGGGATACTTGTTTAATGCCCATCTTGTGGCGGG‑TTTA‑ACGCCG‑ATTGAGGCCAACCGTTATCTCGATTTTTTTATCGAC‑CGACCGCTGGGAATGAAAgg < 1:751589/250‑1 (MQ=255) taataaGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑AAGCCG‑GTTGGGGCCAAAGGTTATCTCGGTTTTTTTATCGAC‑CGGCCGCTGGGGATGGAAggg > 1:704292/1‑250 (MQ=255) ataaGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑ATTGAGGCCAACGGGTATCTCGATTTTTTTTTCGCC‑CGACCGCTGGGGATGAAAgggtt > 1:451860/1‑248 (MQ=255) aaGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGGTACTCGTTTAATGCCCATCTGGTTGCGGG‑TTTT‑ACCCCG‑ATTTAGGCCCACGGGTTTCTCCCTTTTTTTTTTCAC‑CGACCGCTTGGGATGGAAGGTtatt > 2:324811/1‑250 (MQ=255) aaGCGGGGTTACCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑GTTA‑AAGCCG‑ATTTAGGCCAACGGTTATCTCGATTTTTTTATCGAC‑CGGCCGCTGGGAATGAAAGGGtat > 1:166861/1‑250 (MQ=255) aCCG‑GTTTGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑ATTGAGGCCAACGGTTATCTCGATTTTTTTATCGAC‑CGACCGCTGGGAATGAAAGGTTATATTCTCAAt‑ct < 1:745035/251‑1 (MQ=255) agaagaGCCAGGAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAAGTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑ATTGAGGCCAACGGTTATCTCGATTTTTTTATCGAC‑CGACCGCTGGGAATGAAAGGTTATATTCTCAAT‑CTCACCATTCGCGGTCAg < 2:707550/251‑1 (MQ=255) aagaGACAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑GTTGAGGCCAACGGTTATCTCGATTTTTTTATCGAC‑CGACCGCTGGGAATGAAAGGTTATATTCTCAAT‑CTCACCATTCGCGGTCAggg > 1:799465/1‑251 (MQ=255) agCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑ATTGAGGCCAACGGTTATCTCGATTTTTTTATCGAC‑CGACCGCTGGGAATGAAAGGTTATATTCTCAAT‑CTCACAATTCGCGGTCAGGGggt < 1:318253/251‑1 (MQ=255) gCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGGATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGGTACTCGTTTAATGCCCCTCTGGTGGCGGG‑GTTT‑ACGCCG‑CTTGAGGCCAAAGGTTATCTCTGTTTTTTTTTCGGC‑CCACCGCTGGGGATGAAAGGTTATTTTTTCAATTCTC‑CCATTTGCGGGCAggggggg > 2:62768/1‑249 (MQ=255) cAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑ATTGAGGCCAACGGTTATCTCGATTTTTTTATCGAC‑CGACCGCTGGGAATGGAAGGGTATATTTTCAAT‑CTCACCATTCGCGGGCAggggggggg > 1:124726/1‑247 (MQ=255) aGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑ATTGAGGCCAACGGTTATCTCGATTTTTTTATCGAC‑CGACCGCTGGGAATGAAAGGTTATATTCTCAAT‑CTCACCATTCGCGGTCAGGGGgtggtg < 2:451860/251‑1 (MQ=255) aaGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATg < 1:76390/94‑1 (MQ=255) aGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑ATTTAGGCCAACGGTTATCTCGATTTTTTTATCGAC‑CGGCCGCTGGGGATGAAAGGGTATATTCTCCAT‑CTACCCATTCGCGGTCAGGGGGTGGTGAAAAAt > 1:317152/1‑251 (MQ=255) gCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑ATTGAGGCCAACGGTTATCTCGATTTTTTTATCGAC‑CGACCGCTGGGAATGAAAGGTTATATTCTCAAT‑CTCACCATTCGCGGTCa < 2:64796/231‑1 (MQ=255) gCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑ATTGAGGCCAACGGTTATCTCGATTTTTTTATCGAC‑CGACCGCTGGGAATGAAAGGTTATATTCTCAAT‑CTCACCATTCGCGGTCAGGGGGGGGGGAAAAATCAgg > 1:329620/1‑251 (MQ=255) gCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑GTTA‑AAGCCG‑GTTTGGGCCCAAGGTTATCTCGATTTTTTTATCGAC‑CGACCGCTGGGAATGAAAGGTTATATTCTCAAT‑CTCCCCCTTCGCgggca > 1:64796/1‑228 (MQ=255) gTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑ATTGAGGCCAACGGTTATCTCGATTTTTTTATCGAC‑CGACCGCTGGGAATGAAAGGTTATATTCTCAAT‑CTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGAc < 2:525064/251‑1 (MQ=255) gACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCCTCTGGTGGCGGG‑TTTA‑ACCCCGGATGGAG‑CCAACGGTTATTTCGATTTTTTTATC‑ACACTACCGCTGGGAGTGAAAGGTTATATTCTCAAT‑CTCCCCATTCTCGGGCAgggggggggggaaaaacaggtacg > 2:649635/1‑231 (MQ=255) aCGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑ATTTAGGCCAACGGTTATCTCGATTTTTTTATCGAC‑CGACCGCTGGGGATGAAAGGTTATATTCTCAAT‑CTCACCATTCGCGGGCAGGGGGTGGGGAAAAATCAGGGACg > 1:285767/1‑249 (MQ=255) gCAATGTCTTATGCAAGATGGACATTTGGTTTCTTCTCTGAATGGCGGGAGGTTGAAAATTATAGCTTAAGCGCAAAAAGAGCCCCTGCTTCCGGGATACTCTTTTAATGCCCATCTGGAGGCGGG‑TTTA‑ACGCCG‑ATTGAGGCCAACGGTTATCTCGATTTTTTTATCGAC‑CGACCGCTGGGAATGAAAGGTTATAGTCTCAAT‑CGCAACATTCGCGCTCAGGGGGTGGTGAAAAATCAGGTACGAGAAt < 2:745034/251‑1 (MQ=255) gCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGGGGCGGG‑GTTA‑ACGCCG‑GTTGAAGGCAACGGGTATCTCCGTTTTTTTTTCGCC‑CGACCGCTGGGGATGAAAGGTTTTATTCTCAATTCTC‑CCAATCGCGGTCCGGGGGGGGGGTAAAAAAAAGGACGAGAAt > 2:537717/1‑251 (MQ=255) aaTGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑ATTGAGGCCAACGGTTATCTCGATTTTTTTATCGAC‑CGACCGCTGGGAATGAAAGGTTATATTCTCAAT‑CTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAAttt < 2:553346/251‑1 (MQ=255) tGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCCAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGGGGCGGG‑GTTT‑ACGCCG‑ATTGAGGGCAACGGTTATCTCGGTTTTTTTATCGAC‑CGACCGCTGGGGATGAAAGGTTATATTCTCAAT‑CTCAACATTCGCGGTCAGGGGGTGGTGAAAAAACAGGGGAGAGGATTTGt > 2:774079/1‑251 (MQ=255) gATGCAATATGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑TTTGAGGCCAACGGTTATTTCGATTTTTTTATCGAC‑CGACCGCTGGGAATGAAAGGTTATATTCTCAAT‑CTCACCATTCGCGGTCTGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTTTGcc > 1:224758/1‑251 (MQ=255) tGGACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑ATTGAGGCCAACGGTTATCTCGATTTTTTTATCGAC‑CGACCGCTGGGAATGGAAGGTTATATTCTCAAT‑CTCACCATTCGCGGTCAGGGGGGGGTGAAAAATCAGGGACGAGAATTTGTTTGCCGACCggggg > 1:241931/1‑249 (MQ=255) agACAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑GTTA‑AAGCCG‑ATTTAGGCCCACGGGTTTTTCGGTTTTTTTATCGAC‑CGACCGCTGGGAATGAAAGGTTATATTTTCAAT‑CTCACCATTCGCGGGCAGGGGGTGGGGAAAAATCAGGGACGAGAATTTTTTTGCCGACCgggggg > 1:45825/2‑248 (MQ=255) aCAATTGGTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑ATTGAGGCCAACGGTTATCTCGATTTTTTTATCGAC‑CGACCGCTGGGAATGAAAGGTTATATTCTCAAT‑CTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTTTGCCGACCGGGTGata < 2:945614/251‑1 (MQ=255) gTTTCTTCTCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑ATTGAGGCCAACGGTTATCTCGATTTTTTTATCGAC‑CGACCGCTGGGAATGCAAGGGTATATTCTCAAT‑CTCCCCATTCGCGGGCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTTTGCCGACCGGGTGAAATTTTGCt > 1:976612/1‑251 (MQ=255) tcttctCTGAATGGCGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAATGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑ATTGAGGCCAACGGTTATCTCGATTTTTTTATCGAC‑CGACCGCTGGGAATGAAAGGTTATATTCTCAAT‑CTCACCATTCGTGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTTTGCCGACCGGGTGATATTTTGCTGt < 1:749800/250‑1 (MQ=255) tGAATGGTGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAACGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑ATTGAGGCCAACGGTTATCTCGATTTTTTTATCGAC‑CGACCGCTGGGAATGAAAGGTTATATTCTCAAT‑CTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGaa < 1:22106/212‑1 (MQ=255) | TCTTATGGATAAAAATGCTATGGCATAGCAAAGTGTGACGCCGTGCAAATAATCAATGTGGACTTTTCTGCCGTGATTATAGACACTTTTGTTACGCGTTTTTGTCATGGCTTTGGTCCCGCTTTGTTACAGAATGCTTTTAATAAGCGGGGTTACCG‑GTTGGGTTAGCGAGAAGAGCCAGTAAAAGACGCAGTGACGGCAATGTCTGATGCAATATGGACAATTGGTTTCTTCTCTGAATGGTGGGAGTATGAAAAGTATGGCTGAAGCGCAAAATGATCCCCTGCTGCCGGGATACTCGTTTAACGCCCATCTGGTGGCGGG‑TTTA‑ACGCCG‑ATTGAGGCCAACGGTTATCTCGATTTTTTTATCGAC‑CGACCGCTGGGAATGAAAGGTTATATTCTCAAT‑CTCACCATTCGCGGTCAGGGGGTGGTGAAAAATCAGGGACGAGAATTTGTCTGCCGACCGGGTGATATTTTGCTGT > NC_000913/70128‑70606 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |