| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,561,215 | 0 | G | A | 24.2% | 120.1 / 13.0 | 62 | E96K (GAA→AAA) | kptA | RNA 2'‑phosphotransferase |
| Reads supporting (aligned to +/- strand): ref base G (42/5); new base A (0/15); total (42/20) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.67e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
AAGTTTTTAAGTTTTGTCCTCCGACACAAACCGGAGGCGATTGGTATCGTACTGGACCGTGAAGGATGGGCGGATATCGATAAGCTCATACTTTGTGCCCAAAAAGCGGGCAAGCGGTTAACCC‑GTGCATT‑GCTGGATACTGTGGTTGCCACCAGCGATAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGT > NC_000913/4560969‑4561465 | aaGTTTTTAAGTTTTGTCCTCCGACACAAACCGGAGGCGATTGGTATCGTACTGGACCGTGAAGGATGGGCGGATATCGATAAGCTCATACTTTGTGCCCAAAAAGCGGGCAAGCGGTTAACCC‑GTGCATT‑GCTGGATACTGTGGTTGCCACCAGCGATAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGaaaa < 1:302112/251‑1 (MQ=255) tAAGTTTTGTCCTCCGACACAAACCGGAGGCGATTGGTATCGTACTGGACCGTGAAGGATGGGCGGATATCGATAAGCTCATACTTTGTGCCCAAAAAGCGGGCAAGCGGTTAACCC‑GTGCATT‑GCTGGATACTGTGGTTGCCACCAGCGATAAAAAGCGTTTTAGGTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CAcc < 1:645084/250‑1 (MQ=255) tAAGTTTTGTCCTCCGACACAAACCGGAGGCGATTGGTATCGTACTGGACCGTGAAGGATGGGCGGAGATCGATAAGCTCATACTTTGTGCCCAAAAGGCGGGCAAGCGGTTAACCC‑GTGCATT‑GCTGGATACTGTGGTTGCCACCATCGATAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGTTCGCTATTTCCTTTG‑CCGAAAAAA‑CAcc < 1:793001/250‑1 (MQ=255) gTCCTCCGACACAAACCGGAGGCGATTGGTATCGTACTGGACCGTGAAGGATGGGCGGATATCGATAAGCTCATACTTTGTGCCCAAAAAGCGGGCAAGCGGTTAACCC‑GTGCATT‑GCTGGATACTGTGGTTGCCACCAGCGATAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGtt > 1:115336/1‑251 (MQ=255) gTCCTCCGACACAAACCGGAGGCGATTGGTATCGTACTGGACCGTGAAGGATAGGCGGATATCGATAAGCTCATACTTTGTGCCCAAAAAGCGGGCAAGCGGTTAACCC‑GTGCATT‑GCTGGAAACTGTGGTTGCCACCAGCGATAAACAGCGTTTTAGTTATTCCAGTGATGGAAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGtt > 2:101572/1‑251 (MQ=255) tcctccGACACAAACCGGAGGCGATTGGTATCGTACTGGACCGTGAAGGATGGGCGGATATCGATAAGCTCATACTTTGTGCCCAAAAAGCGGGCAAGCGGTTAACCC‑GTGCATT‑GCTGGATACTGTGGTTGCCACCAGCGATAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGttt > 1:60400/1‑251 (MQ=255) aaaCGGGAGGCGATTGGTATCGTACTGGCCGGTGAGGGAGGGGCGAAAACCGATAAGCTCATTCTTTGTGCCCAAAAAGCGGGAAAGCGGTAAACCC‑GTGCATT‑GCTGGATACTGTGGTGCCCACAAGCGATAAAAAGCGTTTTAGTTATTCCAGTGAGGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGTCTTCGCGGGTCGCTATTTCCTTTG‑CCAAAAAAC‑CACCGCCACAGTTTCTCTACCACgg < 1:299425/251‑1 (MQ=255) tgggtcgcggcctggcctgggAAGGAGGGGCGTATGGCGATAAGCTATTTCTTTGTCCCAAAAAAGCGGGAAAGGGGTTACCCC‑GTGACTT‑GCTGGATGCTGGGGGTGCCTCCAGCGAAAAAAAGCGTTTTATTTTTCCCAGGAAGGGAAGGGTCACCCGCGTGGTTA‑GGGGGCATGCGATTTCGCGGCCCGCTATTTCAGTGC‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCg < 2:148620/230‑1 (MQ=255) gtgtCGTACTAGACCGTGAAGGATGGGCGGATATCGCTAAGCTCATACTTTGTGCCCAAAAAGCGGGCAAGCGGTTAACCC‑GAGCCTT‑GCTGGATACTGTGGTTGCCACCAGCGATAAAAAGCGTTATAGTGATTCCAGTGATGGTCGGTGAATCCGCGCGGTTC‑AGGGGCATTCGAATTCGCAGGACGCAATTTCCTTTA‑CCGAAAAAA‑CACCACCACACATTCTCTACCACGATACGGCAAGCCGTTTc > 2:777323/4‑251 (MQ=255) tATCGTACTGGACCGTGAAGGATGGGCGGATATCGATAAGCTCATACTTTGTGCCCAAAAAGCGGGCAAGCGGTTAACCC‑GTGCATT‑GCTGGATACTGTGGTTGCCACCAGCGATAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTcc > 1:494311/1‑251 (MQ=255) tCGTACTGGACCGTGAAGGATGGGCGGATATCGATAAGCTCATACTTTGTGCCCAAAAAGCGGGCAAGCGGTTAACCC‑GTGCATT‑GCTGGATACTGTGGTTGCCACCAGCGATAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGAAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCtt > 1:990972/1‑251 (MQ=255) cGTACTGGACCGTGAAGGATGGGCGGATATCGATAAGCTCATACTTTGTGCCCAAAAAGCGGGCAAGCGGTTAACCC‑GTGCATT‑GCTGGATACTGTGGTTGCCACCAGCGATAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTg > 1:719430/1‑251 (MQ=255) tGGACCGTGAAGGATGGGCGGATATCGATAAGCTCATACTTTGTGCCCAAAAAGCGGGCAAGCGGTTAACCC‑GTGCATT‑GCTGGATACTGTGGTTGCCACCAGCGATAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACg > 1:336118/1‑249 (MQ=255) ggACCGTGAAGGATGGGAGGATATCGATAAGCTCATACTTTGTGCCCAAAAAGCGGGCAAGCGGTTAACCC‑GTGCATT‑GCTGGATACTGTGGTTGCCACCAGCGATAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACg > 1:774676/1‑248 (MQ=255) gAAGGATGGGCGGATATCGATAAGCTCATACTTTGTGCCCAAAAAGCGGGCAAGCGGTTAACCC‑GTGCATT‑GCTGGATACTGTGGTTGCCACCAGCGCTAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTCCGGCAAGACGTTTCCTTGACGAGATaaaaa > 2:577845/1‑250 (MQ=255) aaGGATGGGCGGATATCGATAAGCTCATACTTTGTGCCCAAAAAGCGGGCAAGCGGTTAACCC‑GTGCATT‑GCTGGATACTGTGGTTGCCACCAGCGATAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATaaaaaa > 1:184967/1‑250 (MQ=255) gATGGGCGGATATCGATAAGCTCATACTTTGTGCCCAAAAAGCGGGCAAGCGGTTAACCC‑GTGCATT‑GCTGGATACTGTGGTTGCCACCAGCGATAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAAc > 1:46732/1‑249 (MQ=255) ggggggATATGGATAGGCTCATATTTTGTGCCAAAAAAGGGGGCAGGTGGTTACCCG‑GGGCATG‑GCGGTCAACTGTGGTGCCCCCCAGCGAAAAAAATCTTTTCAGTGATTCCATGGAGGGTGGGTGCA‑CCCCGGGGTTCCAGGGCCATCGGTCTCCGCTGGTCGTTATTTTCTGGG‑CAAAAAAAA‑CACCGCCACAGTTGCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAgggg < 1:110924/247‑1 (MQ=255) ggCGGATATCGATAAGCTCATACTTTGTGCCCAAAAAGCGGGCAAGCGGTTAACCC‑GTGCATT‑GCTGGATACTGTGGTTGCCACCAGCGATAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGc > 2:976980/1‑251 (MQ=255) ggggATACCGAAAAGCTCATACTTGGTGCACAAAAAGCGGGCAAGCGGTTAACCC‑GTGCTTT‑GCGGGATACTGTGGTTGCCACCAGCGAAAAAAAGCGTTTTATTTATTCCAGTGATGGTAGGTGCACCCGCGCGGTTA‑GGGGGCTTTCGCCTTCGCAGGTCGTTTTTTCCTTTG‑CCAAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCt < 1:976980/249‑1 (MQ=255) atatCGATAAGCTCATACTTTGTGCCCAAAAAGCGGGCAAGCGGTTAACCC‑GTGCATT‑GCTGGATACTGTGGTTGCCACCAGCGATAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGAtt > 1:881541/1‑251 (MQ=255) cTTTGTGCCCAAAAAGCGGGCAAGCGGTTAACCC‑GTGCATT‑GCTGGATACTGTGGTTGCCACCAGCGATAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACt > 2:457790/1‑250 (MQ=255) aaaggggtcAAGCGGTTAACCC‑‑TGTTTTTGCTGGTTACTGGGGTTGCAACCAGCGATAAAAAGCGTTTTGGTTTTTCCAGTGATGGTAGGTGCATCCGCGGGTTTC‑AGGGGCATTCGACTCCGCAGGCATCTATT‑CCTTTGGCCAAAAAAC‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACAtctctc < 1:465397/243‑1 (MQ=255) gggCAAGCGGTTAACCC‑GTGCATT‑GCTGGATACTGTGGTTGCCACCAGCGATAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTctgctg > 1:295530/1‑251 (MQ=255) ggCAAGCGGATAACCC‑GTGCATT‑GCTGGATACTGTGGTTGCCACAAGCGATAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑AACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGAAGGTGAGCGTCACTACgaaactctctatgc > 2:755940/1‑235 (MQ=255) aaGCGGTTAACCC‑GTGCATT‑GCTGGATACTGTGGTTGCCACCAGCGATAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCtgatg > 1:182312/1‑250 (MQ=255) aagcgTTAACCCCGTGAATT‑GTTGGATACTGGGGTTGCCACCAGCGATAAAAGGGTTTTTAGTTATTCCAGGGATGGTGGGTCCACCCGCGGGGTTC‑AGGGGCATCCGCCTTCGCAGGCCGTTTTTTCCTTGG‑CCAAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCtgatga < 1:855382/247‑1 (MQ=255) aGCGGTTAACCC‑GTGCATT‑GCTGGATACTGTGGTTGCCAACAGCGATAAAAAGAGTTTTCGTTATTCCAGGGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGACAAGCCGTTTCATTGACGAGATAAAACAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCtgatgc > 2:502787/1‑249 (MQ=255) ggTTAACCC‑GTGCATT‑GCTGGATACTGTGGTTGCCACCAGCGATAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTCCATCTCTCTGCTGATGCAGc > 1:981641/1‑250 (MQ=255) gTGCATT‑GCTGGATACTGTGGTTGCCACCAGCGATAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGCAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGc > 1:896679/1‑251 (MQ=255) gTGCATT‑GCTGGATACTGTGGTTGCCACCAGCGATAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGc > 1:780918/1‑251 (MQ=255) tGCATT‑GCTGGATACTGTGGTTGCCACCAGCGATAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGcc > 2:54822/1‑250 (MQ=255) t‑GCTGGATACTGTGGTTGCCACCAGCGATAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTg > 2:310107/1‑251 (MQ=255) gtggccacgggCGATAAAAAGCTTTTTAGTTATTCCAGTGAGGGGGGTTGCTTCCGCGTGGTTC‑GGGGGTTTTCGACTCCGTAGGTCGCTATTTCTTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACgg < 1:529086/241‑1 (MQ=255) ccccccaGCTATAAAAATTGTTTTAGTTTTTCTATGGAGGGTGGGTGCACCCGGGCGGTAC‑GGTGGCATTCGACTCCGTAGGTCG‑TTTTTTCTTTG‑CCAAAAAAAACCCCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATc < 2:755303/247‑1 (MQ=255) caGCGATAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGTTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCgg > 2:188349/1‑251 (MQ=255) aaaaaaaGCGTTTTAGTTTCTCCAGTGATGTGAGGTGCCTCCGCGGGGTAC‑GGGGTCTTTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCAAAAAAA‑CCCCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTAtt < 2:336118/249‑1 (MQ=255) aaaaGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAACAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGGGGGAGCAAGACACGAATCGTCGGTTAtttt > 2:529719/1‑250 (MQ=255) ttAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGCCTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACAGTcca > 2:376059/1‑248 (MQ=255) aTTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGGCAAAGcac > 1:596063/1‑249 (MQ=255) tCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAAAGCACAgg > 2:870256/1‑250 (MQ=255) ccaggggtggtagtgccctCCGCGTGGTTG‑AGGGGCATTCGGCTCCGCGGGCCGTTTTTTCTTTTG‑CCAAAAAAC‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAAAGCACAgg < 2:467724/231‑1 (MQ=255) ccAGTGCTGGTAGGTGCCTCCGCGCGGTTC‑AGGGGCATTCGCCTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAACAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAAAGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGGCCAAGcaacaga > 2:430866/1‑245 (MQ=255) tGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAAAGCACAGGAAATgg > 1:330810/1‑251 (MQ=255) gATGGTAGGAGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAAAGCACAGGAAATGGc > 1:661165/1‑251 (MQ=255) aTGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGCCACGGATCGTCGGTTATTTTACCCGTCAAAGCACAGGAAATGGCg > 2:516854/1‑251 (MQ=255) tGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCg > 1:255677/1‑250 (MQ=255) ggTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTggg > 2:938453/1‑197 (MQ=255) tAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACAtctct > 2:464499/1‑164 (MQ=255) aTCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTATGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAggact > 1:306473/1‑248 (MQ=255) ggTTC‑CGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGACAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCt > 1:267452/1‑251 (MQ=255) ttggggatctacgctttcgctgttCGCTATTTCCTTCG‑CCAAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTgg < 1:736024/227‑1 (MQ=255) gggttcttcgctctCGCAG‑TCGCTTTTTTCTTTGACCAAAAAAA‑CCCCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAg < 2:60400/238‑1 (MQ=255) gACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACg > 1:939827/1‑251 (MQ=255) gCAGGTCGCTATGTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTACTTGACGAGATAAAAAAACAAAGGCTGATTGCAGGCGAGCGTCACTACGTACATCTATCTGCTGATGAAGCAACGGCACGCAAAGTGGGCGCAAGACACGGATCGTCGGATATTTTAACCTGCAAAGCAACGGAAATGGGAAAACGAGGCCTCCCTTTCGGGCGAGCGGAAAAAgggatat > 2:498099/1‑247 (MQ=255) ccgggtctcttttcccTTTC‑CCAAAAAAC‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCt < 1:755940/237‑1 (MQ=255) gtcgttttttCCTTTG‑CGAAAAAAA‑CACCGCCACAGTTTCTCTACCACGGGACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCt < 1:497506/244‑1 (MQ=255) attcccTTTG‑CCAAAAAAC‑CTCCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTTATGAAGCAACGGCTCGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAAAGCACAGGTAATGGCGAAACGTGGCCTCCTTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACAt < 1:866440/246‑1 (MQ=255) tttCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATc > 1:604142/1‑250 (MQ=255) ccTTTG‑CAAAAAAAA‑CACCGCCACAGTTTCTCTAGCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGACACTACGTACATATCTCTGCGGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTATCCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGTCAAGCGGAAAACGGGGTCTGGCTTACATCAAc < 2:990972/250‑1 (MQ=255) ccTTTC‑CCAAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAAcg < 1:618854/251‑1 (MQ=255) g‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGACTGGCTGACATCAAcgggtgc > 1:323628/1‑251 (MQ=255) gAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGCTCGTCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGCAAACGGGGTCTGGATGACATCAAcggttgcggt > 2:953504/1‑251 (MQ=255) | AAGTTTTTAAGTTTTGTCCTCCGACACAAACCGGAGGCGATTGGTATCGTACTGGACCGTGAAGGATGGGCGGATATCGATAAGCTCATACTTTGTGCCCAAAAAGCGGGCAAGCGGTTAACCC‑GTGCATT‑GCTGGATACTGTGGTTGCCACCAGCGATAAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTC‑AGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTG‑CCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACCGTCAAAGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGT > NC_000913/4560969‑4561465 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |