Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,027,2330TA29.0% 108.9 / 16.6 62intergenic (+5/+376)fre/fadANAD(P)H‑flavin reductase/3‑ketoacyl‑CoA thiolase
Reads supporting (aligned to +/- strand):  ref base T (34/10);  new base A (0/18);  total (34/28)
Fisher's exact test for biased strand distribution p-value = 7.10e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

TGAAGCATCCTGGTCTGCAAGTGGTGCCGGTGGTTGAACAACCGGAAGCGGGCTGGCGTGGGCGTACTGGCACCGTGTTAACGGCGGTATTGCAGGATCACGGTACGCTGGCAGAG‑CATGATATCTATAT‑TGCC‑GGACG‑TTT‑TGAGATGGCG‑AAAATTGCCCGCGATCTGTTTT‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGG  >  NC_000913/4026996‑4027474
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                  
ttaaGCATCCTGGTTTGCAAGTGGTGCCGGTGGTTGAACAACCGGAAGCGGGCTGGCGTGGGCGTACTGGCACCGTGTTAACGGCGGTATTGCAGGATCACGGTACGCTGGCAGAG‑CATGATATCTATAT‑TGCC‑GGACG‑TTT‑TGAGATGGCG‑AAAATTGCCCGCGATCTGTTTT‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGc                                                                                                                                                                                                                                        <  1:72405/248‑1 (MQ=255)
 gAAGCATCCGGGTCTGCAAGTGGTGCCGGTGGTTGAACAACCGGAAGCGGGCTGGCGTGGGCGTACTGGCACCGTGTTAACGGCGGTATTGCAGGATCACGGTACGCTGGCAGAG‑CATGATATCTATAT‑TGCC‑GGACG‑TTT‑TGAGATGGCG‑AAAATTGCCCGCGATCTGTTTT‑G‑CAGTGAGCGTAA‑TACG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGccc                                                                                                                                                                                                                                      <  1:64046/251‑1 (MQ=255)
    gCATCCTGGTCTGCAAGTGGTGCCGGTGGTTGAACAACCGGAAGCGGGCTGGCGTGGGCGTACTGGCACCGTGTTAACGGCGGTATTGGCGGGTCAAGGGAAACCGGCAGAA‑GATGATATCTATAT‑TTCC‑GGACG‑GTT‑TGTGGTGGCG‑GAAAATGCCCGCGCTCTGTTTT‑T‑CAGTGAGCGTAA‑ATCG‑CGGGAAAGTCGCCCGTTTTG‑CGGTGCGT‑TTTGC‑TTTTTTTTAGATATTAAAAAAACCGcccccg                                                                                                                                                                                                                                   >  1:744309/1‑249 (MQ=255)
                       gtgCCGGTGGTTGAACAACCGGAAGCGGGCTGGCGTGGGCGTACTGGCACCGTGTTAACGGCGGTATTGCAGGATCCCGGGACGGTTGCAGAG‑CATGATATTTATAT‑TTCC‑GGAAG‑GTT‑TGAGATGGGG‑GAAATTTCCCCCGGTCTGTTTT‑T‑CAGTGAGAGGAA‑TGCG‑CGGGAGGAGCGCCTGTTTGG‑GGATGCGG‑TT‑GCCTTTTTCTTGGATATAAAAAAAAACGCCCCTGACAGGCgggggagaaggcc                                                                                                                                                                                                                >  1:21704/1‑241 (MQ=255)
                       gggCCGGTGGTTGAACAACCGGAGGGGGGGTGGCGGGGGCGTACTGGCCCCGTGTAAACGGCGGTATTGCAGGATCACGGTACGTGGGAAGAG‑CATGATATTTATAT‑TGCC‑GGAGG‑TTT‑TGAGATGGCG‑AAAATTGCCCGCAATTTGTTTT‑G‑CAGTGAGCGAAA‑TGCG‑GGGGAAGATCGCTTTTTGGG‑CGATGGTT‑TT‑GATTTTATCGGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCa                                                                                                                                                                                                                <  1:267928/249‑1 (MQ=255)
                             gtggtTGAACAACCGGAAGCGGGCTGGCGTGGGCGTTCTGGCACCGTGTTAACGGCGGTATTTCAGGGTTACCGGACGCCGGGAGAG‑AATGATATTTTTAT‑TGTC‑GGACGGTTT‑TG‑GATGGGGGAAAATT‑CCCGCGGTCTGGTTT‑T‑CAGGGGGCGGAA‑TTCG‑CGGGGAGAACGCCTGTTTTG‑GGGTGCGT‑TT‑GTATTTTTCTTAGATATTAAAAAACCCCCCCCTGACAGGCGGggagaaagagaaacaa                                                                                                                                                                                                           >  1:493021/1‑240 (MQ=255)
                                                   gtgggtgggggctaaCTGGCACGGTGTTAAGGGCGGTTTTGCAGGATCACGTTACGGGGGCAGAG‑CAGGATATTTATAT‑GGCG‑GGTGG‑TTT‑GGAGATGGCG‑AAAATTGCCCGCTATCTTTTTG‑G‑CAGTGGTCTTAA‑TGCG‑CGGGAAAACCGCCTGTTTGC‑CGTTGCGT‑TT‑GCTTTTATTTGAAATAAAAAAAACCCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATACAGTGGCATTTAGa                                                                                                                                                                                    <  1:801515/237‑1 (MQ=255)
                                                    gtGGCGTGGGCTTACTGGCACCGTGTTAGCGGTGGTATTCAAGGTTGACGGAAGGGTGGAAGAG‑TATGATTTCTA‑ATGTGCC‑GGCCT‑TTT‑AGAGAAGGCG‑AAAATTGCCCGATTTCTGTTTG‑G‑GAGTGAG‑GTAAGTGCG‑CGGGAAGATCGCTTTTTGGG‑CGAGGCTT‑TT‑CCTTTTAGCTGAAATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGAt                                                                                                                                                                                   <  1:10151/250‑1 (MQ=255)
                                                    cTGGCGTGGGCGTACTGGCACCGTGTTAACGGCGGTATTGCAGGATCACGGTACGCTGGCAGAG‑CATGATATCTATAT‑TGCC‑GGGCG‑TTT‑TGGGATGGCG‑AAAATTGCCCGCGATCTGTTTT‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGACCGGCCACTAAAATCTTTTTCAGTGGCATTTatat                                                                                                                                                                                   >  2:303276/1‑248 (MQ=255)
                                                                 ccTGGCCCCGTTTTAGCGGGGGTATGGCAGGATCAGGGTCCGCGGGAAGAG‑CATGATATTTATAT‑GGCC‑GGACT‑TTT‑GGAGATGGGG‑AAAATGCCCCGCGATCTGTTTT‑G‑CAGTGGTCTTAA‑TGCG‑CGGGAAGTTCGCCTGTTGGG‑CGATGCGT‑TT‑GCATTGATCTGAAATAAAAAAAATCCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCt                                                                                                                                                                      <  1:623423/250‑1 (MQ=255)
                                                                       ccgttgtTACCGGGGGTATTTCAGCATCACGTGACCCTGGCA‑AGACATTATATCTAT‑T‑TGCCCGTACG‑TTT‑TGAGATGGAT‑AAAAT‑GCCCCCCATTTTTTTTTG‑CATTGAGCGTAA‑TGCG‑CGGAAAGATCGCCTGTTTGG‑CGATGCTT‑TT‑GCATTTTTTGGAAATATAAAAAACCCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCaaa                                                                                                                                                                <  1:982346/247‑1 (MQ=255)
                                                                         cGTGTTAAGGGCGGTATTGCAGGATCGCGGTGCGCGGGAAGAG‑AATGATATCTATAT‑TGCC‑GGACG‑TTT‑GGAGAGGGCG‑AAAATGGCCCGCGATGTGTTTG‑G‑CAGTGAGCGTAA‑GGCG‑CGGGAAGATCGCTTGTTTGG‑CGAGGCTT‑TT‑GCATTTATCGGAAATAAAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAAcc                                                                                                                                                              <  1:91645/251‑1 (MQ=255)
                                                                                                aTCACGGTACGCTGGCAGAG‑CATGATATCTATAT‑TGCC‑GGACG‑TTT‑TGAGATGGCG‑AAAATTGCCCGCGATCTGTTTT‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGGAGAACGGCCACTAAAATGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTcgcg                                                                                                                                       >  2:345762/1‑251 (MQ=255)
                                                                                                    cGGTACGCTGGCAGAG‑CATGATATCTATAT‑TGCC‑GGACG‑TTT‑TGAGATGGCG‑AAAATTGCCCGCGATCTGTTTT‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGGATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCtt                                                                                                                                   >  1:67483/1‑251 (MQ=255)
                                                                                                       aacgtgggCATAG‑CAAGATATATATTT‑TGCC‑GGGCG‑TTT‑TGAGATGGAC‑AAAATTGCCGGTTGTTTGTGTG‑G‑CAGGGAGAGTAA‑TGCG‑CGGGAAGACCGCC‑GTTTGGGCGATGCTT‑TT‑GTATTTATCGGATATAAAAAAAACCCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATc                                                                                                                                <  1:591156/245‑1 (MQ=255)
                                                                                                          gCTGGCAGAG‑CATGATATCTATAT‑TGCC‑GGACG‑TTT‑TGAGATGGCG‑AAAATTGCCCGCGATCTGTTTT‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACCGTTCTTCAGTGGCGATTAGATCTAATACGTAACTGGCAAAACATCCCCGATGccgcgctggcgccgcttattgtt                                                                                                                             >  2:960062/1‑229 (MQ=255)
                                                                                                                agag‑CATGATATCTATAT‑TGCC‑GGACG‑TTT‑TGAGATGGCG‑AAAATTGCCCGCGATCTGTTTT‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTCAACAGTTATTAAGTGGCATTTAGAACTATGACGGATCTGGCAAAACATGCCCGATGCGACCCTGTCGCGTCTTATCTTGCCTAc                                                                                                                        >  2:551945/1‑250 (MQ=255)
                                                                                                                 gag‑CATGATATCTATAT‑TGCC‑GGACG‑TTT‑TGAGATGGCG‑AAAATTGCCCGCGATCTGTTTT‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAAAGGCAACTAAAATGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACa                                                                                                                       >  1:53124/1‑250 (MQ=255)
                                                                                                                   agtattttttgtttat‑TGCC‑GGA‑G‑TTTGTGATAGGGCG‑AAAATTGCCCGGTATTTGTTGT‑G‑AAGTGAGCGTAG‑TGCG‑CGGGAAGATAGTCTGTTTGG‑CGATGTGT‑TT‑GCATTTATCTGAAAAAAAAAAAACCCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACaat                                                                                                                     <  2:523350/238‑2 (MQ=255)
                                                                                                                           atatctagtgggccggtgg‑TTT‑AGAGAGGGCG‑AAAATGTCCCGGGATC‑GTTTT‑GGCAGTGAGCTAAA‑AGCG‑CGGGAATATCGCC‑GTTTGGGTGCTGCTT‑TG‑GCATTTATCTGAGAAAAAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTcc                                                                                                               <  1:50651/233‑1 (MQ=255)
                                                                                                                             cTATAT‑TGCC‑GGACG‑TTT‑TGAGATGGCG‑AAAATTGCCCGCGATCTGTTTT‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGACTACAAATAGTCCG‑AAc                                                                                                          >  1:774139/1‑251 (MQ=255)
                                                                                                                             cTATAT‑TGCC‑GGACG‑TTT‑TGAGATGGCG‑AAAATTGCCCGCGATCTGTTTT‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGAAGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCC‑AAc                                                                                                          >  1:553947/1‑251 (MQ=255)
                                                                                                                               ttatttggccgaccG‑TTT‑GGAGATGGCA‑AAAATTGCCCGGAATCTGTTTT‑G‑GAGGGGGCGAAT‑TGCG‑CGGAAAGATCGCCTGTTTGG‑GGATGCTT‑TT‑GCATTTATCGGAGATAAAAAAAACCCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑aa                                                                                                           <  1:79654/237‑1 (MQ=255)
                                                                                                                               atat‑TGCC‑GGACG‑TTT‑TGAGATGGCG‑AAAATTGCCCGCGATCTGTTTT‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAAACATGCACGATGCGACGCTATCGCGTCTTATCGTGCCTAAAAATCGTCCG‑AACCg                                                                                                        >  1:822507/1‑251 (MQ=255)
                                                                                                                                  ttggCC‑GGACG‑TTT‑TGAGATGGCG‑AAAATGCCCCGCGATCTGTTTG‑G‑CAGTGAGGGAAA‑TGCG‑GGGGAAGATCGCCTGTTTGG‑GGATGTGT‑TG‑GCTTTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGt                                                                                                       <  1:565756/247‑1 (MQ=255)
                                                                                                                                    tggcgggACG‑TTT‑TGAGAGGGCG‑AAAATGTCCCGTGATTTGTTTT‑G‑GAGGGAGCGTAA‑GGCG‑GGGAAAAATCGCCTGTTTGG‑GGATGGTT‑TT‑TCATTTACCTAAAATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTa                                                                                                      <  2:748360/245‑1 (MQ=255)
                                                                                                                                       tgcgggaggttgtGAGAGGGCA‑AAAATTGCCCGGGATCTGTTTG‑G‑CGGGGGGCGTAA‑GGGG‑GGGAAAGATCGCCTGTTGGG‑CGAGGCGT‑TT‑GCATTTATCTGAGATAAAAAAAACCCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTAg                                                                                                     <  1:490419/238‑1 (MQ=255)
                                                                                                                                          gACG‑TTT‑TGAGATGGCG‑AAAATTGCCCGCGATCTGTTTT‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTAGGCCggg                                                                                               >  1:218290/1‑250 (MQ=255)
                                                                                                                                             g‑TTT‑TGAGATGGCG‑AAAATTGCCCGCGATCTGTTTT‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGGTCTATGACGTATCTGGCAAACCCTGCCCGATGCGACGCTTTCGCGTATTATCGTGCCTCCAAATAGACCG‑CACCGTAGGCCGGATa                                                                                             >  2:278209/1‑250 (MQ=255)
                                                                                                                                              gtttttgggagggag‑AAAGTTGCCCGGGATGTGTTTG‑G‑CAGGGGGCGTAA‑TGCG‑GGGGAAGATCTCTTGTTTGG‑TGA‑GGGTGTT‑GATTTTATGTGAGATAAAAAAAACCCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTAGTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTAGGCCGGATa                                                                                             <  2:29265/237‑1 (MQ=25)
                                                                                                                                               ttt‑tGAGATGGCA‑AAAATTGCCCGCGATCTGTTTT‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTAGGCCGGATaa                                                                                            <  1:441943/250‑1 (MQ=255)
                                                                                                                                                   tGAGATGGCG‑AAAATTGCCCGCGATCTGTTTT‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTTTTCTGGTGCCTTTAGATCTATTACGTATCTGGAACACCATGCCCGCTGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTAAACCGGATCAGGCg                                                                                        >  2:530888/1‑251 (MQ=255)
                                                                                                                                                    gaagagggcaaaaaTTACCCGCGATCTGTTTT‑G‑CTGGGCGCGTAA‑‑GCGGCGGGAAGACCGCCGTTTTGG‑CGAGGGTT‑TT‑GATTTTATCTGAAATAAAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTAGGCCGGATAAGGCg                                                                                        <  2:929259/241‑1 (MQ=25)
                                                                                                                                                           cG‑AAAATTGCCCGCGATCTGTTTT‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAAATAAACTGTTATTCCGTGGCATTTAGATCTATGACGGATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAAAAGTCCG‑AACCGTAGGCCGGATAAGGCGTTTCcgcc                                                                                >  2:127344/1‑251 (MQ=255)
                                                                                                                                                               aaaTTGCCCGCGATCTGTTTT‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTAGGCCGGAAAAGGCGTTTAcgccgc                                                                              >  1:530790/1‑250 (MQ=255)
                                                                                                                                                                aaTTGCCCGCGATCTGTTTT‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGACGAAAGGCCACTAAAATTTTATTCAGTGGCATTTAGATCTATGTCGGATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCCTGCCTACAAATAATCCG‑AACCGTGGGCCGGAGAAGGCGTTTAccccccat                                                                            >  2:861523/1‑244 (MQ=255)
                                                                                                                                                                 aTTGCCCGCGATCTGTTTT‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAAACATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTAGGCCGGATAAGGCGTTTACGCCGCATc                                                                           >  1:591853/1‑251 (MQ=255)
                                                                                                                                                                    gCCCGCGATCTGTTTT‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACTGCAACTAAACTGTTATTCAGTGGCATTTAGAACTATGACGTATCTGGCAAACCATGCCCGATGCGAAGCTGTCGCGTCTTATCAGGCATACCAATAGTCCGTAACAG‑CGGCCGGATAAGGCGTTTAcgccaccaccgg                                                                        >  1:17757/1‑243 (MQ=255)
                                                                                                                                                                    gCCCGCGATCTGTTTT‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCCTGCCCGATGCAACGCTGTCGCGTCTTATCGTGCCTAAAAATAGTCCG‑AACCGTAGTCCGGATAAGGCGTTTAcgccgctaccgg                                                                        >  1:709249/1‑245 (MQ=255)
                                                                                                                                                                      ccgcgttttGTTTG‑G‑CAGTGAGCGTAA‑GGCG‑GGGGAAGACCGCCTGTTGGG‑CGATGCGT‑TT‑GAATTTATCTGAGATAAAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                                      <  1:303276/243‑1 (MQ=37)
                                                                                                                                                                        ccgcgtgctgttttagaggggtggaaa‑TGCG‑GGGAAAGACCGCTTGTTGGG‑CGATGCGT‑TG‑GTATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTAGGCCTTAGAAGGCGTTTACGCCGCATCCGGCa                                                                      <  1:872178/226‑1 (MQ=25)
                                                                                                                                                                            tCTGTTTT‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATATGGCCAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTCGGCCGGATAAAGCGGTTACGCCGCATCCGGCCATTggg                                                                >  2:972361/1‑250 (MQ=255)
                                                                                                                                                                             cTGTTTT‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTg                                                                                                                             >  1:192779/1‑190 (MQ=255)
                                                                                                                                                                              ttttttttggggTGAGTGTAG‑TGCG‑GGGGAATACCGCGTTTTTGG‑GGATGGTT‑TT‑GCTTTTTTCGGAAATAAAAAAAACCCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAACCCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTgg                                                                 <  2:744309/239‑1 (MQ=21)
                                                                                                                                                                              tttttt‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCGTTTTGGG‑CGATGCGT‑TT‑GCATTTATTTGATAAAAAAAAAACCCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTg                                                               <  1:78290/248‑1 (MQ=37)
                                                                                                                                                                               gttgttgtcagggAGCGTAA‑GGCG‑GGGGAAGACCGCTTTTTGGG‑AGATGGTT‑TT‑GCATTTATCTGATATAAAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGt                                                                <  1:530888/238‑1 (MQ=25)
                                                                                                                                                                                tttt‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGCTATAAAAAAACCCGACCCTGACAGGCGGGAAGAAAGGCAACTAAAAAGTTATTCAGTGGCATTTAGATTTATGAAGTAACTGGCCAACCATGCCCGCTGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCAG‑AACCGTCGGCCAGATAAGGCGTTTACGCCGCCACCGGCAAATGGTgga                                                             >  2:988486/1‑248 (MQ=37)
                                                                                                                                                                                tttt‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTAGGCCGGGTAAGGCGTTTACGCCGCATCCGGCAATTGGTGCat                                                            >  1:179075/1‑251 (MQ=255)
                                                                                                                                                                                   t‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACAGCAACTAAACTGTTATTCCGTGGCCTTTAGATATATGACGGATATGGCAAACCCAGCCCGATGGGACGCTGTCGCGTCTTATCGTGCCAACAAATAGTCCG‑AACCCTCAGCCGGAGAATGCGTTTCAGCCCCACCCGGCCATTgggtgatggt                                                         >  2:681346/1‑243 (MQ=255)
                                                                                                                                                                                        aGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCCTGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGcc                                                      >  1:321741/1‑251 (MQ=255)
                                                                                                                                                                                         gTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAAATAAACTGTTCTTCAGTGGCATTTAGATCTCTGACGTATCTGGCAAACCATGCCCGATGCGACGCTGGCGCGGCTTATCTTTCCTACAAATAGTACG‑AACCGTAGGCCGGATGAGGCGTTTTCGCCCCCACCGGCAATTTGTGCCTGATGccc                                                     >  2:817103/1‑250 (MQ=255)
                                                                                                                                                                                           gAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTg                                                    >  1:240641/1‑250 (MQ=255)
                                                                                                                                                                                              cGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTAGGCCGGATAAAGCGTTTACGCCGCATCCGGCCATTGGGGCATGGTGCCTGATgg                                                >  2:313426/1‑250 (MQ=255)
                                                                                                                                                                                                       g‑cgGAAAGATCGC‑TGTTTGGGCGGTGGGT‑TT‑GATTTTATTTGAAATATAAAAAACCCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGt                                        <  1:891133/251‑1 (MQ=21)
                                                                                                                                                                                                                      tGTTGGG‑CGATGCGT‑TT‑GAATTTATCTGAGATAAAAAAAACCCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGt                           <  1:345762/250‑1 (MQ=255)
                                                                                                                                                                                                                                  gCGT‑TT‑CCATTTTTCTGAAATAAAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAg               <  1:323504/251‑1 (MQ=255)
                                                                                                                                                                                                                                           cATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAAATGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCCTGACCGCTGAGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AAACGACGGCCGGAAAAGGCGGTTACTCCTCATCCCGCACTTGGGGCATGATGCCTGATGAGACGCTGTTGCTACTTATCGGGCCTAAAAATAGTCCAAAc        >  2:632131/1‑251 (MQ=25)
                                                                                                                                                                                                                                            aTTTAGCTGAGAAAAAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAcc       <  1:278209/251‑1 (MQ=255)
                                                                                                                                                                                                                                              ttATCTGAGATATAAAAAACCCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCCGTGGCATTTCGATCTATGACGTATCTGGCCAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAACAAGTCCGAAACGt     >  1:115370/1‑251 (MQ=25)
                                                                                                                                                                                                                                              ttATCTGAAATAAAAAAAACCCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCg      <  1:633891/250‑1 (MQ=255)
                                                                                                                                                                                                                                               tATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCGATGCAGGATCTGACAAAACATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGACAATTGGTGCATGATGCCTGATGCGACGCTATCGCGTATTATCGTGACCACAAAAAGTCCGagcc       >  1:716983/1‑245 (MQ=21)
                                                                                                                                                                                                                                                 tCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAAATGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGGAgg  >  1:317719/1‑251 (MQ=255)
                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                  
TGAAGCATCCTGGTCTGCAAGTGGTGCCGGTGGTTGAACAACCGGAAGCGGGCTGGCGTGGGCGTACTGGCACCGTGTTAACGGCGGTATTGCAGGATCACGGTACGCTGGCAGAG‑CATGATATCTATAT‑TGCC‑GGACG‑TTT‑TGAGATGGCG‑AAAATTGCCCGCGATCTGTTTT‑G‑CAGTGAGCGTAA‑TGCG‑CGGGAAGATCGCCTGTTTGG‑CGATGCGT‑TT‑GCATTTATCTGAGATATAAAAAAACCCGCCCCTGACAGGCGGGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCG‑AACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGG  >  NC_000913/4026996‑4027474

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑