New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1397238	NA (NA)	77 (0.800)	70/494	0.3	100%	noncoding (1195/1195 nt)	IS5	repeat region
	?	NC_000913	= 1978494	0 (0.000)					intergenic (‑297/+24)	flhD/insB5	DNA‑binding transcriptional dual regulator FlhD/IS1 family protein InsB

ATGTCGCCGGGAAGCCCCGGTAAAAAATAATTAGCATTAGAATAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACCA  >  NC_000913/1978253‑1978738                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                     aTGTCGCCGGGAAGCCCCGGTAAAAAATAATTAGCATTAGAATAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgc                                                                                                                                                                                                                                             >  2:760270‑M2/1‑242 (MQ=255)    tCGCCGGGAAGCCCCGGTAAAAAATAATTAGCATTAGAATAGATGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCCATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcga                                                                                                                                                                                                                                           <  2:384109‑M2/250‑12 (MQ=255)       ccGGGAAGCCCCGGTAAAAAATAAGTAGCATTAGAATAGTTGCGATAAGCTGCAATAAGCAGAACCACCTCTTTGGTTTAATATGTCCTTACAAATAGAAAGGGGTCTTTACACTTAGCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGAGTTTCAATAAGGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataa                                                                                                                                                                                                                                       >  2:267075‑M2/1‑236 (MQ=255)         gggAAGCCCCGGTAAAAAATAATTAGCATTAGAATAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagc                                                                                                                                                                                                                                     <  1:849934‑M2/251‑18 (MQ=255)          ggAAGCCCCGGTAAAAAATAATTAGCATTAGAATAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcg                                                                                                                                                                                                                                    <  1:498919‑M2/251‑19 (MQ=255)                cccGGTAAAAAATAATTAGCATTAGAATAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggagggtgcgaataagcgggaaa                                                                                                                                                                                                                               <  2:116121‑M2/250‑24 (MQ=255)                  cGGTAAAAAATAATTAGCATTAGAATAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaatt                                                                                                                                                                                                                            <  2:376585‑M2/251‑27 (MQ=255)                       aaaaaTAATTAGCATTAGAATAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttct                                                                                                                                                                                                                       >  2:604291‑M2/1‑220 (MQ=255)                        aaaaTACTTAGCATTAGAATAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCAATACACGCACATCCAACGGAGGGGGGCTGCGATTTTCAATAATGCGAGATACAGATCACACAAAACACTCAATTACTTACggaatgtgcgaataagcggggaacatcacttc                                                                                                                                                                                                                      <  2:119611‑M2/251‑33 (MQ=255)                           ataatTAGCATTAGAATAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggc                                                                                                                                                                                                                   <  1:265039‑M2/251‑36 (MQ=255)                                    aTTAGAATAGGTTCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGGTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACGTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGATGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagt                                                                                                                                                                                                          >  1:472140‑M2/1‑207 (MQ=255)                                      tAGAATAGTTGCGATACGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggcagggtcgaatatgcgggtaacttcttctcgtctgaatcagtc                                                                                                                                                                                                         <  2:495557‑M2/250‑46 (MQ=255)                                       agaagaGTTGCGATAAGCTGCAATAAGTAGAACCACCTTTCTGGTTTAATATGTACTTACAAATAGAAATGGGTCTTTACTCTTAACTAAGATTTTTCCTAAAGCGACGCAACTTTACTCGTCACTACACGCACATACAACGGAGTGGGGCTGCGATTTTCAATAAGGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgactaagcggggaaattcttctcggctgactcagtaat                                                                                                                                                                                                       >  2:605354‑M2/1‑204 (MQ=255)                                       aGAATAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGCTGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgactaagcggggaaattcttctcggctgactcagtcat                                                                                                                                                                                                       <  2:957947‑M2/251‑48 (MQ=255)                                       aGAATAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcat                                                                                                                                                                                                       <  1:687712‑M2/251‑48 (MQ=255)                                         aaTAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcattt                                                                                                                                                                                                     >  2:735241‑M2/1‑202 (MQ=255)                                                        cTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGCGATGCAGATCACACAAAACACTCAATTACTTAAggcaggtgcgaataagcggggaaattcttctcggctaactcagtcatttcatttattcatgttt                                                                                                                                                                                      <  2:478514‑M2/251‑65 (MQ=255)                                                          gaaataAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttg                                                                                                                                                                                     >  2:438586‑M2/3‑185 (MQ=255)                                                          gCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttg                                                                                                                                                                                     >  1:136730‑M2/1‑185 (MQ=255)                                                           cAATAAGCAGAAACACCTTTTTGGTTTCCTATGTCATTACAAATAGAAATGGGTCTTTACACTTCTCTAAGATTTTTCCTAAATCGACGCAACTGTCCTCGTCACTACACGCACATACAACGGCGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACACAACACTCAATTACTTACggaaggtgagactaagcggggcaattcttatcggctgactcagtcatttcatttcttcatgtttg                                                                                                                                                                                     <  2:966842‑M2/249‑66 (MQ=255)                                                                   aGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttt                                                                                                                                                                           >  1:56102‑M2/1‑176 (MQ=255)                                                                     aaCCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttt                                                                                                                                                                         >  1:563565‑M2/1‑174 (MQ=255)                                                                        caccTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAAGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctc                                                                                                                                                                      <  1:333977‑M2/251‑81 (MQ=255)                                                                                tGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggggcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttttagccgcttttttctcccgtaaat                                                                                                                                                              <  1:511359‑M2/251‑89 (MQ=255)                                                                                       atatGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttg                                                                                                                                                        <  1:119330‑M2/250‑95 (MQ=255)                                                                                                tACAAATAGAAATGGGTCGTTACACTTATCTAAGACTTTTCCTAAACCGACGCAACGGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACCCAAAACACTCAATTACATAAggaaggtgcgaataagcggggaaattcttctcggctgacccagtcatttcatttcttcaggtttgagccgattgtttctcccggaaatgcctttaaccagcct                                                                                                                                               >  2:481899‑M2/1‑147 (MQ=255)                                                                                                          aaTGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcgggggaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgt                                                                                                                                    <  2:787901‑M2/251‑115 (MQ=255)                                                                                                                   ttACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttc                                                                                                                              >  1:483027‑M2/1‑128 (MQ=255)                                                                                                                   ttACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttctgc                                                                                                                              >  1:125006‑M2/1‑128 (MQ=255)                                                                                                                    tACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCACTTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgcc                                                                                                                           <  2:325138‑M2/250‑124 (MQ=255)                                                                                                                     acacTTATCTAAGATTTTGCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccat                                                                                                                         >  1:177707‑M2/1‑126 (MQ=255)                                                                                                                        cTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGAACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACAATCAATTACTTAAgaaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttcccccgtaaatgccttgaatcagcctatttaaaccgtttcttcgccattt                                                                                                                       <  2:799546‑M2/250‑128 (MQ=255)                                                                                                                          tagctatGATTTTTCCTAAATCGACGCAACTGTACGCGTCACTACACGCACATACAACGGAGGGTGGCTGCGATTTGCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgagtttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattta                                                                                                                      >  2:930094‑M2/4‑121 (MQ=255)                                                                                                                           aTCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaagg                                                                                                                   <  1:237936‑M2/251‑132 (MQ=255)                                                                                                                              tAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAAAGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCATATCACACAAAACACTCAATTACTTAAggaaggagcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttggatcagcctttttagaccgtttcttcgccatttaaggcgt                                                                                                                <  2:793129‑M2/251‑135 (MQ=255)                                                                                                                               aaGATTTTTCCTAAATCGAAGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTAAATAATGCGTGATGCAGATAACACAAAACACTCACTTACTTAAggaaggagcgaataagcgggtaaattcttctcggctgactcagtcatttaatttattcatgtttgagccgattttttctcccgtcaatgccttgaatcagcctatttaaaccgtttcttcgccatttatggcgtt                                                                                                               <  1:609000‑M2/251‑136 (MQ=255)                                                                                                                                 gATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttttagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttat                                                                                                             <  1:526609‑M2/251‑138 (MQ=255)                                                                                                                                        ccTAAATCGACGCAACTGTACTCGTCACAACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTCCTTAAggaaggtgcgaataagcggggaaattcttctcggctgactaagtcatttcatttcttcatgtgtgagccgattttttctcccgtaaataccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatcccaagt                                                                                                      <  2:653046‑M2/251‑145 (MQ=255)                                                                                                                                            aaTCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt                                                                                                  <  1:588014‑M2/251‑149 (MQ=255)                                                                                                                                             aTCGACGCAACTGTACTCGTCACTACACGCACCTACAACGGATGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggctttatccccagtttttt                                                                                                 <  2:476933‑M2/251‑150 (MQ=255)                                                                                                                                             aTCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACTCAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttt                                                                                                 <  2:253749‑M2/251‑150 (MQ=255)                                                                                                                                              acgACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttag                                                                                                >  1:957947‑M2/2‑101 (MQ=255)                                                                                                                                                         gTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctc                                                                                     <  1:701644‑M2/251‑162 (MQ=255)                                                                                                                                                           aCTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctccc                                                                                   >  2:460819‑M2/1‑88 (MQ=255)                                                                                                                                                             tCGTCACTACACGCACATACAACGGCGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgactaagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagttctctccccc                                                                                 <  1:761021‑M2/251‑166 (MQ=255)                                                                                                                                                              cGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgacttagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctccca                                                                                  >  2:83292‑M2/1‑85 (MQ=255)                                                                                                                                                               gTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACTCTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactg                                                                               >  2:588014‑M2/1‑84 (MQ=255)                                                                                                                                                                    tACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgccgt                                                                           <  2:513010‑M2/250‑172 (MQ=255)                                                                                                                                                                           acaTACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttg                                                                   <  1:348660‑M2/251‑180 (MQ=255)                                                                                                                                                                                              tGCGGTTTTCAATAATGCGTGATGCAGATAACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggagaaattcttctcggctacctcagtaatttcatttcttcatgtttgagcagattttttctcccgtaaatgccttgaatcagcctatttataccgtttcttcgccatttaaggcgttatccccagtttttagtgagctctctcccactaccggatcatttggtcctcccgcaacaggttc                                                <  2:650634‑M2/251‑199 (MQ=255)                                                                                                                                                                                               gCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccacagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttg                                                >  1:293181‑M2/1‑52 (MQ=255)                                                                                                                                                                                                cGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttaatgtttgagccgattttttatcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttctccccagtttttagtgagttctttcccattgccgttccatttggtccaccgggaacgggaga                                                <  2:756942‑M2/249‑199 (MQ=255)                                                                                                                                                                                                cGATTTTCAATAATGCGTGAAGCAGATCACACAAAACACTCAATTACTTAAagaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgtatcagcctatttagaccgtttcttcgccatttaaggcgttattcccagtttttagggagatcgctcccactgacgtatcatttggtccgcccg                                                          >  1:756942‑M2/1‑51 (MQ=255)                                                                                                                                                                                                 gATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggcc                                             >  2:289326‑M2/1‑50 (MQ=255)                                                                                                                                                                                                  aTTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggcca                                            >  1:670037‑M2/1‑49 (MQ=255)                                                                                                                                                                                                      tCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatgtaaggcgttatccccagtttgtagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcg                                         >  1:116121‑M2/1‑45 (MQ=255)                                                                                                                                                                                                       cAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtg                                       <  1:302466‑M2/251‑208 (MQ=255)                                                                                                                                                                                                         ataatGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtga                                      <  1:315378‑M2/250‑209 (MQ=255)                                                                                                                                                                                                            atGCGTGATGCAGATCACACAAAACACTCAATTACTTAAggcaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgcaacaggctggccagcgtgaata                                   <  2:802100‑M2/250‑212 (MQ=255)                                                                                                                                                                                                               cGTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgcttttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagagtgaataacat                               <  1:117808‑M2/251‑216 (MQ=255)                                                                                                                                                                                                                gTGATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatc                              >  2:265039‑M2/1‑35 (MQ=255)                                                                                                                                                                                                                  gATGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgc                            <  1:963396‑M2/251‑219 (MQ=255)                                                                                                                                                                                                                    tGCAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgcc                           <  1:119257‑M2/250‑220 (MQ=255)                                                                                                                                                                                                                      cAGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagt                        <  1:811829‑M2/251‑223 (MQ=255)                                                                                                                                                                                                                       aGATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagtt                       <  1:53295‑M2/251‑224 (MQ=255)                                                                                                                                                                                                                        gATCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttg                      >  1:513010‑M2/1‑27 (MQ=255)                                                                                                                                                                                                                         aTCACACAAAACACTCAATTACTTAAggaaggtgcgaataagcgtggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttttccccagtttttagtgagatctctcccactgccgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttgg                     <  2:761943‑M2/251‑226 (MQ=255)                                                                                                                                                                                                                           cacacaAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttggt                    >  1:816980‑M2/1‑24 (MQ=255)                                                                                                                                                                                                                               caAAACTGTCAATTACTGTAgtaaggtgcgaataagcggggaaattcttctcggctgtctcagtcatttcattgcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaagtcgttttccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttggttatcg               >  1:580630‑M2/1‑20 (MQ=255)                                                                                                                                                                                                                               caAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttggttatcg               >  2:119330‑M2/1‑20 (MQ=255)                                                                                                                                                                                                                               caAAACACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttggttatcg               <  1:367966‑M2/251‑232 (MQ=255)                                                                                                                                                                                                                                  aaCACTCCATTACTTAAggaaggtgcgaataagcggggaaagtcttctcggctgactcagtcatttcattgcttcatttttgagcctattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttgtttatcgttt            >  2:146529‑M2/1‑17 (MQ=255)                                                                                                                                                                                                                                  aaCACTCAATTACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgcacgttggttatcgttt            <  2:148456‑M2/251‑235 (MQ=255)                                                                                                                                                                                                                                    cacTCAATTTCTTAAtgaaggtgccaataagcggggaaattcttctcggctgactcagtcagttcttttcttcatgtttgagccgattttttctcccgtaaatgcctggaatcagcctatttagaccgtttcttcgccattgaaggcgttatccccattttttagtgagatctctcccactgacgtatcattttgtccgcccgatacaggttggccagcgtgaataacatcgccagttggttatcgttttt          >  1:118004‑M2/1‑15 (MQ=255)                                                                                                                                                                                                                                    cacTCAATTACTTAAggatggtgcgaataagcggggaaattcttctctgctgactcaggcatttcatttcttcatgtttgagccgattgtttcttccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccattttttagtgagagctctcccactgacgtatcatttggtccgcccgaaacatttgggccagcgtgaataacatcgcccgttggttatcgttttt          >  2:991496‑M2/1‑15 (MQ=255)                                                                                                                                                                                                                                           ttACTTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctcccactgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttggttatcgtttttcagcaac   <  1:46416‑M2/251‑244 (MQ=255)                                                                                                                                                                                                                                             aCTTAAggaaggtgcgcataagctgggaaattcttctcggctgactcagtcatttcatttcttcatgttttagccgattttttctcccgtaaatgcctttaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttttagtgagatctctccctctgacgtatcatttggtccgcccgaaacaggttggccagcgtgaataacatcgccagttggttatcgtttttcagcaacc  >  2:324420‑M2/1‑6 (MQ=255)                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                                     ATGTCGCCGGGAAGCCCCGGTAAAAAATAATTAGCATTAGAATAGTTGCGATAAGCTGCAATAAGCAGAACCACCTTTTTGGTTTAATATGTCCTTACAAATAGAAATGGGTCTTTACACTTATCTAAGATTTTTCCTAAATCGACGCAACTGTACTCGTCACTACACGCACATACAACGGAGGGGGGCTGCGATTTTCAATAATGCGTGATGCAGATCACACAAAACACTCAATTACTTAACATAAATGGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTTCCGTCCCAGCCGTGCCAGGTGCTGCCTCAGATTCAGGTTATGCCGCTCAATTCGCTGCGTATATCGCTTGCTGATTACGTGCAGCTTTCCCTTCAGGCGGGATTCATACAGCGGCCAGCCATCCGTCATCCATATCACCA  >  NC_000913/1978253‑1978738

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.