New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3584195	NA (NA)	106 (1.100)	93/494	0.1	100%	noncoding (768/768 nt)	IS1	repeat region
	?	NC_000913	4542042 =	0 (0.000)					coding (6/597 nt)	fimE	regulator for fimA

GTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGAT  >  NC_000913/3583946‑3584444                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                           gTCACCCTGTGACGTGGTGATATGGATGACGGAGGGCTGGCCGCTGTATGAAGCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGAGATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCGCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGTCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCg                                                                                                                                                                                                                                                           <  1:413660/251‑1 (MQ=2)    aCCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGAc                                                                                                                                                                                                                                                         >  1:68783/1‑250 (MQ=31)     cccTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAt                                                                                                                                                                                                                                                       <  1:664966/251‑1 (MQ=31)      ccTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGATCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGTCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAtt                                                                                                                                                                                                                                                      <  1:965791/251‑1 (MQ=17)      ccTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGaactt                                                                                                                                                                                                                                                      >  2:130905/1‑247 (MQ=11)         ttGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTAGGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTa                                                                                                                                                                                                                                                     <  1:165994/249‑1 (MQ=17)          gaccGTGGTGATATGGTTGCCGGATGGCTGGCCGCTGTATGAATCCCGCCGGAAGTGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAAGAAGTTGGAGTCATTACCGACATTaaa                                                                                                                                                                                                                                                   <  2:12520/247‑1 (MQ=255)                ggtgATATGGATAACGGATGGTCGGCCGCGGGATGAATCCCGCCTGAAGGGAAAGCTGCAGGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAAGCTGAGGCAGCACCTGGCACGGATGGGACGGAAGTCGCTGTCGTTCTCAAAATCGTTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTGGGAGTCATTACCGACATTAAAAGTAACt                                                                                                                                                                                                                                            <  2:371025/251‑1 (MQ=11)                  tgATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACttt                                                                                                                                                                                                                                          >  1:362359/1‑251 (MQ=38)                    atatGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGACCATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACttttt                                                                                                                                                                                                                                        >  2:739686/1‑251 (MQ=38)                      atGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACtttttt                                                                                                                                                                                                                                       <  1:153299/250‑1 (MQ=39)                      atGGATGACGGATGGCGGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTg                                                                                                                                                                                                                                      <  1:49980/251‑1 (MQ=255)                        ggATGACGGAGGGCTGGCCGCAGTATGAATCCCGCATGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACTCTATCAAAAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGaa                                                                                                                                                                                                                                    <  2:154583/251‑1 (MQ=255)                            gACGGATGGCTGGCAGCTGAATGAATCCCGCCTGAAGGGAAAGCTGCACGTAAGCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTa                                                                                                                                                                                                                                <  2:758989/251‑1 (MQ=255)                                 aTGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGa‑t                                                                                                                                                                                                                          <  1:903026/251‑1 (MQ=255)                                  ggtcgggcCGCTGCATGAATCCCGCCTGAAGGGAAAGCTGAACGTAATCAGCAAGCGATATACGCAGCTAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCGGTCGTGCTCAAAATCGGTGGAGCGGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACATTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGa‑ta                                                                                                                                                                                                                         <  2:881966/246‑1 (MQ=14)                                   ggctggcCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTTGCACGGCTTGGACGGAAGTCGCTGTCGTTCTCAAAAGCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGa‑taa                                                                                                                                                                                                                        <  1:928361/251‑1 (MQ=255)                                     ctggcCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAACGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGa‑taatc                                                                                                                                                                                                                      >  1:428674/1‑250 (MQ=255)                                         ccGCTGTATGATTCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTTCCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TATTATTgg                                                                                                                                                                                                                  <  1:582097/251‑1 (MQ=255)                                         ccGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTgg                                                                                                                                                                                                                  <  1:658588/251‑1 (MQ=255)                                          cGCTGTATGAATCCCGCCGGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGc                                                                                                                                                                                                                 <  2:362359/251‑1 (MQ=255)                                           gCTGTATGAATCCCGCCTGAAGGGAAAGCGGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGca                                                                                                                                                                                                                <  2:447016/251‑1 (MQ=255)                                                aTGAATCCCGCCTGAAGGGAAAACTGCACGTAATCAGCAAGCGATATACGCAGCGACTTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGAAGAAAGTCGCTGTCGTTCTCAAAATCGGTGGCGATGACTGCCAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATAACCGCCATTAACAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCCCAgc                                                                                                                                                                                                            >  2:952458/1‑249 (MQ=14)                                                             gAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAg                                                                                                                                                                                                <  1:655981/249‑1 (MQ=255)                                                              aaGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTc                                                                                                                                                                                             >  1:928131/1‑251 (MQ=255)                                                              aaGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTc                                                                                                                                                                                             >  1:210135/1‑251 (MQ=255)                                                               aGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCg                                                                                                                                                                                            <  1:762607/251‑1 (MQ=255)                                                                gggAAAGCTGCACGTAAACAGCAAGCGATATACGCAGGGAATTGAGCGGCATAACCTGAACCTGAGGCAGCAACTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTAAAAATCGGTGGAGCTGCAGGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCGt                                                                                                                                                                                           <  2:278534/251‑1 (MQ=255)                                                                 ggAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCGtt                                                                                                                                                                                          >  1:167203/1‑251 (MQ=255)                                                                       cTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGTATCTGAGGCAGCACCTGGCACGGCTGGGACGGTAGTCGCTGTCGTTCTCAAAATCAGTGGAGCTGCATGACAAAGTCATTGGGCATTACCTGAACCTAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAACAGCAACTTTTTTGAAATTAGAGA‑TAATATTGGCTCAGAAAATAAATTCAGTTCGTTTAGTgc                                                                                                                                                                                    >  1:101293/1‑250 (MQ=17)                                                                            cGTAAGCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTtct                                                                                                                                                                               <  1:541337/251‑1 (MQ=255)                                                                             gTAAGCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCGGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTtctc                                                                                                                                                                              <  1:127757/251‑1 (MQ=255)                                                                                                      gAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGAc                                                                                                                                                     <  1:222760/251‑1 (MQ=255)                                                                                                          ggAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAgtt                                                                                                                                                 <  1:487872/250‑1 (MQ=255)                                                                                                            aGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACATAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAgttgt                                                                                                                                               <  1:144099/251‑1 (MQ=255)                                                                                                               ggCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCa                                                                                                                                            <  1:635226/251‑1 (MQ=255)                                                                                                                    aaCCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTaga                                                                                                                                                                                                                              <  1:486292/165‑1 (MQ=255)                                                                                                                    aaCCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTaga                                                                                                                                                                                                                              >  2:486292/1‑165 (MQ=255)                                                                                                                      ccTGAATCTGAGGCAGCACATGGCACGGCTGGGCCGGCAGTCTCTGTCGTTCTCAAAATCGGTGGCGCTGCATGACACAGTCATCGGGCATTATCTGCACATAAAACACTATCAATAAGTTGGAGTCATTACAGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAACATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATaataat                                                                                                                                     >  2:483207/1‑251 (MQ=25)                                                                                                                          acgcTGAGGCAGCTCCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAATTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTGGGAGTCATTACCGACATTAAAAGTATCTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGAGTTCTCGTCATTCTTAAACGAAATCATGGACAGTTGGGCATAATAATCaaa                                                                                                                                 <  1:865592/248‑1 (MQ=25)                                                                                                                                   cagcaCCTGGCACGGCTGGGACGGAAGTCGCTGTAGGTCTCAAAATCGGTGGAGCTGCATGAAAAAGTCATCGGGAATTATCTGAACATAAAACACTAGCAATAAGTTGGAGTCATTAACGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACaa                                                                                                                        <  1:114867/251‑1 (MQ=255)                                                                                                                                       aacTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGATGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCCCAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGCAATCATGGACAGTTGTTCCTAATAATCAAAAGGAAACaaaatt                                                                                                                    >  2:471996/3‑249 (MQ=255)                                                                                                                                        ccTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATc                                                                                                                   >  2:727632/1‑251 (MQ=255)                                                                                                                                           ggCACGGCTGGGACGGAAGGCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCAtt                                                                                                                <  1:320941/251‑1 (MQ=255)                                                                                                                                             cACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGt                                                                                                              <  1:855244/251‑1 (MQ=255)                                                                                                                                                        cGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCa                                                                                                   <  1:419906/251‑1 (MQ=255)                                                                                                                                                            aGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCtt                                                                                               >  2:27469/1‑251 (MQ=255)                                                                                                                                                              tCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCtttt                                                                                             >  2:373327/1‑251 (MQ=255)                                                                                                                                                                     cgtgttcAAAATCGGTGGAGCTGCATGAAAAAGGCATCGGGCATTATCTGAACATAAAACACTATCAATAATTGGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACATAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTGGTTCATAATAATCAAAAGGAAACAAAAATCAGTGTAAACCATGCCCTTTTTTTAgaga                                                                                       <  2:212891/245‑1 (MQ=38)                                                                                                                                                                           cAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACca                                                                                 <  1:130905/250‑1 (MQ=255)                                                                                                                                                                                        gCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGCGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCCAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCtt                                                                   >  2:476712/1‑251 (MQ=255)                                                                                                                                                                                           gCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCATCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGtt                                                                <  1:338537/251‑1 (MQ=255)                                                                                                                                                                                            cATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTc                                                               >  2:292273/1‑251 (MQ=255)                                                                                                                                                                                                aCAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGaaa                                                           <  1:682176/251‑1 (MQ=255)                                                                                                                                                                                                      gcactgggCATTATCTGAACATAAAACACTATCAATAAGTTGGGGTTATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGc                                                     <  2:748196/246‑1 (MQ=255)                                                                                                                                                                                                           gggCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGc                                                >  1:158335/1‑251 (MQ=255)                                                                                                                                                                                                                                 acTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAAc                          <  1:373327/251‑1 (MQ=255)                                                                                                                                                                                                                                                ggttCATTACCGACAGTAAAAGTAACCTGTATGAAATGAGAGAATAA‑ATTGGCACAGAAAATTTATGTAGTGCGTTTATTGATTTCTCTGCATTCTTAAACTAAATCATGGACATTTGTTCATAATAATCAAAAGGAAACAAAAATCAGTGTGAACCATACCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCTAAATTTAGCAGTGCAAGCTATGGAAAAACTTTCAACGGAACTTCACTcatt           <  2:505852/248‑4 (MQ=255)                                                                                                                                                                                                                                                         ccGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGAt  <  1:954314/251‑1 (MQ=255)                                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                                           GTCACCCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGA‑TAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGAT  >  NC_000913/3583946‑3584444

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.