| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 66,688 | G→A | intergenic (‑138/+147) | araD ← / ← araA | L‑ribulose‑5‑phosphate 4‑epimerase AraD/L‑arabinose isomerase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 66,688 | 0 | G | A | 96.4% | 141.9 / ‑4.0 | 57 | intergenic (‑138/+147) | araD/araA | L‑ribulose‑5‑phosphate 4‑epimerase AraD/L‑arabinose isomerase |
| Reads supporting (aligned to +/- strand): ref base G (2/0); new base A (21/33); total (23/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.64e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.72e-01 | |||||||||||
CGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCAGGCGTTACATACCGGATGCGGCTACTTAGCGACGAAACCCGTAATACACTTCGTTCCAGCGCAGCGCGTCTTTAAACGCTGGCAGGCGTGTGTCGTTATCAATCACCGTGAT > NC_000913/66444‑66921 | cgcTCGCGAACAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTATGTTTTGGCAGCGCCAGGTTGGCCTCTAAGACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTa < 2:306600/251‑1 (MQ=255) ccgcgATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTATGTTTTGGCAGCGCCAGGTTGGCCTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGc < 1:353550/250‑1 (MQ=255) cgATCAACGGCTCTGACGTTGTCCCAGGTGAGCGGGACCAGGTTATGTTTTGGCAGCGCCAGGTTGGCCTCTAATCCCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTTCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑Tg < 2:463710/251‑1 (MQ=21) cGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTATGTTTTGGCAGCGCCAGGTTGGCCTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGAc < 1:247820/251‑1 (MQ=255) ggctgtctgtgccctaagtgAGCGGGACCATGTTATGGTTTGGCAGCGCCAGGTGTGCCTCTAATACCTGGCGTTGGAGATCTTCTAACATGTTGCCTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGGGTAGGCTTGATAAGACGCGCCAGCGTCGCAGCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGAcgcg < 2:451433/234‑1 (MQ=18) gTTGCCCCATGTGAGCGTGACCAGGTTATGTTTTGGCAGCGCCAGGTTGGCCTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGt > 1:429084/1‑251 (MQ=255) gACCAGGTTATGGTTTGGCAGCGCCAGTTTGGCCTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAAt < 1:627843/250‑1 (MQ=21) atgtTTTGGCAGCGCCAGGTTGGCCTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATgcg > 1:285378/2‑251 (MQ=255) ttGGCAGCGCCAGGTTGGCCTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATCAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGCTGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGACGCATCAGGCGTTGAATGCCGGCTGCGCtttt > 2:369377/1‑250 (MQ=21) tGGCAGCGCCAGGTTGGCCTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGGCGCATCAGGCGTTGAATGCCGGATGCGCTTTg < 1:565022/250‑1 (MQ=255) gcCAGGTTGGCCTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCg > 1:663465/1‑251 (MQ=255) cAGGTTGGCCTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGc > 1:162451/1‑251 (MQ=255) cTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTACCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCgtg > 1:381160/1‑251 (MQ=255) ggCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGCATGCCGGATGCGCTTTGCTTATCCGGCCTCCAAAATCGCAGCGCGTAGGCC‑TGATAAGACGCGCCAGCGACGCATCAGGCGTTGAACGCCGGATGCGCTTTGCTTATCCGCCCTACAAAATCGCAGCgtgt > 1:327372/1‑250 (MQ=255) gCGTTTGAGATCTTCTAATATGTTGACTGCTTCGTGCCGGATGCGCGTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAg < 1:680267/251‑1 (MQ=255) tGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGcct < 1:382460/250‑2 (MQ=255) ttctAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACCAAATCGGAACGCGGAGGCC‑TGCTACGACGCGCCAGCGTCGCACCAGTCGTTGAATGCCGGAAGCGCTTTGCTTATCCGGCCTACAAAAACGCAgagggtcggcccgaaacgac > 2:514594/1‑232 (MQ=18) tctAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGAc < 1:396057/250‑1 (MQ=255) gACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCg < 1:334751/251‑1 (MQ=255) tCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACCAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCCGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCAt > 1:238413/1‑251 (MQ=255) ccTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCa < 1:560252/249‑1 (MQ=255) cTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGGGTCGGCCTGATAAGACGCGACAACGTCGccta > 2:702729/1‑247 (MQ=18) gCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGtt < 1:692805/251‑1 (MQ=255) cGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTGTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGAGTCGCATCAGGCGTTAc > 2:485226/1‑251 (MQ=255) tGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGTTACacac > 1:234386/1‑248 (MQ=255) tttGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCg > 1:106798/1‑182 (MQ=255) ttggcctATCCGGCCGACAAAATCGCAGCGTGTAGGCCGGATAAGGCGCGCCAGCGTCGCATCAGGCGCTGAATGCCGGAGGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCg < 2:106798/176‑1 (MQ=17) tagccgggcgaCAAAATCGCAGCGTGTAGGCCTGAATAGACGCGCCAGCGGCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTAGCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGTTACACACCTGATGCga < 2:8182/239‑2 (MQ=18) ccgtccTATAAAATCGCGGAGTGTATGCCTGATAAGACGCGCCAGCGTCGCAGCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGGTGAATGCCGGATGCGCTTTGCTTAGCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCGGCGTCGCATCAGGCGTTACACACCTGATGCGactact < 2:469276/247‑1 (MQ=17) gtcTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAAGCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGTTACACAACTGATGCGACTACTTAg < 2:393852/249‑1 (MQ=18) ccTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGTTACACACCTGATGCGACTACTTAGc > 1:502055/1‑251 (MQ=255) ccAAAACCGCATCGTGCAGGCCCGCTAAGACGCGCCAGCGTAGCATCAGGCGTTGAACGCCGGATGCGCTTTGCTTATCCGGCCTACCAAAGCGGAACGCGTAGGCC‑CGATAAGATGCGTTAGCGTCGCATCAGGCGTTGAATGTCGGATGCGCTTTGTTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAATACGCGTCAGCGTCGCATCAGGCGTTACACACCTGATGCGACTACTTAGcga < 1:445710/249‑1 (MQ=21) accGCAGCGGGTAGGCCTGAAAAGACGCGCCGGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGTTACACACCTGATGCGACTACTTAGCGACGaaat < 2:112382/249‑2 (MQ=18) cgagcttgtggtccggaaaaGACGCGCTATCGGCGCAACATGCGTAGAAGGCCGGGTTCGCTTTGCTTATCCGGCCTTCAAAAACGGACCGCGTAGGCC‑TGATAAGACGCGTCAGCGGCGCATCAGGCGTTGAATGCCGGATGCGCATTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGTTACACACCTGATGCGACTACTTAGCGACGAAATCCg < 2:6456/233‑1 (MQ=16) gtgtAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAAGGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGTTACACACCTGATGCGACTACTTAGCGACGAAATCCGTAATa < 1:360681/251‑1 (MQ=18) gttggCCTGATAAGACGCGCTAGCGGCGCATCAGGCGTTGTATGCCGGTTGCGCTTTGCTTATACGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGGGTCAGCGTCGCATCAGGCGTTTAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCTGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGTTACACACCTGATGCGACTACTTAGCGACGAAATCCGTAATac < 2:408807/247‑1 (MQ=18) gCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGTTACACACCTGATGCGACTACTTAGCGACGAAATCCGTAATACACTTc < 1:145343/251‑1 (MQ=18) aTAAGACGCGCCAGCGTCGAATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGTTACACTCCTGATGCGACTACTGAGCGACGAAATCCGTAATACACTGCGTTcc < 2:640660/251‑1 (MQ=18) gcgcCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTTTCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGTTACACACCTGATGCGACTACTTAGCGACGAAATCCGTAATACACTTCGTTCcagcgcag < 2:429084/251‑1 (MQ=18) cATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGTTACACACCTGATGCGACTACTTAGCGACGAAATCCGTAATACACTTCGTTCCAGCGCAGCGCGGCTTTaa > 1:555911/1‑250 (MQ=18) aTCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGTTACACACCTGATGCGACTACTTAGCGACGAAATCCGTAATACACTTCGTTCCAGCGCAGCGCGTCTTTAAAc < 1:224452/251‑1 (MQ=18) cAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGTTACACACCTGATGCGACTACTTAGCGACGAACTCCGTAATACACTTCGTTCCAGCGCAGCGCGTCTTTAAACGc > 1:630660/1‑251 (MQ=18) gCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGTTACACACCTGATGCGACTACTTAGCGACGAAATCCGTAATACACTTCGTTCCAGCGCAGCGCGTCTTTAAACGCTgg > 1:355268/1‑251 (MQ=18) cGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGTTACACACCTGATGCGACTACTTAGCGACGAAATCCGTAATACACTTCGTTCCAGCGCAGCGCGTCTTTAAACGCTGGc > 1:328889/1‑251 (MQ=18) attccGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGTTACACACCTGATGCGACTACTTAGCGACGAAATCCGTAATACACTTCGTTCCAGCGCAGCGCGTCTTTAAACGCTGGCAGGCgg < 2:234386/248‑2 (MQ=18) aTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGTTACACACCTGATGCGACTACTTAGCGACGAAATCCGTAATACACTTCGTTCCAGCGCAGCGCGTCTTTAAACGCTGGCAGGCgg < 1:467564/251‑2 (MQ=18) tccgtattcgcTTTGCTTATCCGGCCTACAAAATCTGAACGCGTAGTCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTTAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGTTACACACCTGATGCGTCTACTTAGCGACGAAATCCGTAATACTCTTCTTTCCAGCGCAGCGCTTCTTTAAACGCTGGCAGGCggg < 1:609674/242‑3 (MQ=18) cGGATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATAAGGCGTTACACACCTGATGCGACTACTTAGCGACGAAATCCGTAATACACTTCGTTCCAGCGCAGCGCGTCTTTAAACGCTGGCAGGCggggt > 2:512529/1‑246 (MQ=18) ggATGCGCTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGTTACACACCTGATGCGACTACTTAGCGACGAAATCCGTAATACACTTCGTTCCAGCGCAGCGCGTCTTTAAACGCTGGCAGGCgggtatc < 1:305698/251‑7 (MQ=18) aTGCGCGTTGCTTATCCGGCCTAAAAAATCGGAACGCGTATGCC‑GGTTAAGACGCGCATGCGTCGCTTCTGGCGTTTAATGCCGGATTCTCTTTGCTTTTCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCTTCATCGTCGCATCAGGCGTTACACACCTGATGCGACTACTTATCGACGAAATCCGTAATACACTTCGTTCCAGCGCAGCGCGTCTTTAAACGCTGTCAGGCGGGTATCGt < 2:447001/251‑1 (MQ=19) gcgcTTTGCTTATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTCGGCCTGATAAGACGCGTCAGAGTCACATCAGGCGTTACACACCAGATGCGACTACTTAGCGACGAAATCCGAAATACACTACAGTCCAGCGCAGCGCGTCCTTAAACGCaggcaggcaggttgcgtt > 2:116528/1‑240 (MQ=17) gttgtcttagcggggcTACAAAATCGGAACGCGTAGGCCGTG‑TAAGACGCGCCCGCGTCGCATCGGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAAACGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCGTCAGGCGTTACACACCTGATGCGACTACTTAGCGACGAAATCCGTAATACACTTCGTTCCAGCGCAGCGCGTCTTGAAACGCTGGCAGGCGGGTATCGTTatca < 2:247892/236‑1 (MQ=18) tATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGCATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAACGTGCAGGCCTGGTAAGACGCGTCCGCGTCGCATAAGGCGCTACACACCTGACGCGACGACTTCGCGTCGAAATCCGGAATACGCTTCGTTCCAGCGCAGCGCGTCTTTAAACGCTGGCAGGCggggactcgctacaacaccac > 2:169781/1‑231 (MQ=12) tATCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTACTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGTTACACACCTGATGCGACTACTTAGCGACGAAATCCGTAATACACTTCGTTCCAGCGCAGCGCGTCTTTAAACGCTGGCAGGCGGGTATCGTTATCAATCAc < 1:234613/249‑1 (MQ=21) aTCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGTTACACCCCTGATGCGACTACTTAGCGACGAAATCCGTAATACACTTCGTTCCAGCGCAGCGCGTCTTTAAACGCTGGCAgggggggatagttatccatccccgg > 2:24034/1‑228 (MQ=18) aTCCGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGTTACACACCTGATGCGACTACTTAGCGACGAAATCCGTAATACACTTCGTTCCAGCGCAGCGCGTCTTTAAACGCTGGCAGGCGGGTATCGTTATCAATCACCGt < 1:24034/251‑1 (MQ=21) cGGCCTACAAAATCGGAACGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGTCAGCGTCGCATCAGGCGTTACACACCTGATGCGACTACTTAGCGACGAAATCCGTAATACACTTCGTTCCAGCGCAGCGCGTCTTTAAACGCTGGCAGGCGGGTATCGTTTTCAATCACCGTggt > 1:295393/1‑249 (MQ=21) | CGCTCGCGATCAACGGCGCTGACGTTGCCCCATGTGAGCGTGACCAGGTTGTGTTTTGGCAGCGCCAGGTTGGCTTCTAATACCTGGCGTTTGAGATCTTCTAACATGTTGACTCCTTCGTGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCTGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGCGTAGGCC‑TGATAAGACGCGCCAGCGTCGCATCAGGCGTTGAATGCCGGATGCGCTTTGCTTATCCGGCCTACAAAATCGCAGCGTGTAGGCCAGATAAGACGCGTCAGCGTCGCATCAGGCGTTACATACCGGATGCGGCTACTTAGCGACGAAACCCGTAATACACTTCGTTCCAGCGCAGCGCGTCTTTAAACGCTGGCAGGCGTGTGTCGTTATCAATCACCGTGAT > NC_000913/66444‑66921 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |