| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,561,368 | C→T | P147S (CCG→TCG) | kptA → | RNA 2'‑phosphotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,561,368 | 0 | C | T | 96.5% | 179.1 / NA | 58 | P147S (CCG→TCG) | kptA | RNA 2'‑phosphotransferase |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (34/22); minor base G (0/2); total (34/24) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
AAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTGCCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATAAACAACGCCGCCGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATT > NC_000913/4561128‑4561607 | aaaaaGCGTTTTGGTTATTCCAGTGATGGTCGGTGCATCCGCGCGGTTCAGGGGCATTCGACTTCGAAGGTCGCTATTACCTTTGCCGAAAACA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCATTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGAACAGAGGGAGCAAGACCCGGCTCGTCGGTTAtttt > 2:565341/1‑251 (MQ=255) cGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTGCCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTAATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGt > 1:70373/1‑251 (MQ=255) gTTTTAGTTATTCCAGAGATGGTAGGTGCATCCGCGCGGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTGCCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTc > 1:416316/1‑251 (MQ=255) aTTCCAGTGATGGTAGGTGCATCCGCGCGGTTCAGGGGCCTTCGACTTCGCAGGACGCTATTTCCTTTGCCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGCTTGCAGGTGAGCGTCCCTACGTACATCTCTCTGATGAGGACGCAACGTCACGCAAAGTGGGGGCAAGACACGGATCGTCGGGTATTTTAAACGTCaa‑atccacg > 2:55794/1‑245 (MQ=255) ttCCAGTGATGGGAGGTGCATCCGCGCGGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTGCCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGCGAGCGTCACTACGTACATCTCTCTGCGGATGAAGCAACGGCACGCAAAGTGGGAGCAAGCCACGGATCGTCGGTTATTTTACCCGTACA‑AGCACAgg > 2:621814/1‑251 (MQ=255) cccggtgttgtgagcttgaTCCGCGCGGTCCAGGGCAATTCGCTTTCGCTGGTCGTTATCCCCTTTGC‑GAAAAAATCCCCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCGTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGTATCGTCGGTTATTTTAACCGTCAA‑AGcaca < 1:359748/230‑1 (MQ=255) ccAGTGATGGTAGGTGCATCCGCGCGGTTCCGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTGCCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGa > 2:119948/1‑250 (MQ=255) gATGGTAGGGGCATCCGCGCGGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCATTTGCCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCAATACGTACATCTCTCTGCTGTTGAAGCAACGGCACGCAAAGAGGGAGCAAGAAACGGATCGTCGGGTATTTTAACCGTCAA‑AGCACAGGCAATggg > 2:625116/1‑250 (MQ=255) ggTGCATCCGCGCGGTTCAGGGGCATTAGACTTCGCAGGTCGCTATTTCCTTTGCCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGAGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGAGAAACg > 2:645096/1‑250 (MQ=255) gTGCATCCGCGCGGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTGCCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACg > 1:379237/1‑249 (MQ=255) cATCCGCGCGGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTGCCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGcc > 1:408191/1‑251 (MQ=255) aTCCGCGCGGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTGCCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGCAATGGCGAAACGAGGCCt > 1:22038/1‑251 (MQ=255) gcgGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTGCCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCttt > 1:298627/1‑251 (MQ=255) gACTTCGCAGGTCGCTATTTCCTTTGCCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAACAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAG‑AGCACAGGAAATAGCGCAACGAGGCCTCCCTTTCTGGAAAGAGGAAAACg > 2:8248/1‑251 (MQ=255) aCTTCGCAGGTCGCTATTTCCTTTGCCGAAAAAA‑CACCGCAACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAACCgg > 2:351560/1‑251 (MQ=255) gTCGCTATTTCCTTTGCCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGtt > 1:375628/1‑177 (MQ=255) gTCGCTATTTCCTTTGCCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCACGCGGAAAACGGGGTCTGGCt > 2:199129/1‑251 (MQ=255) tATTTCCTTTGCCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACAt > 1:359866/1‑251 (MQ=255) tttcctgttgacaaaaaaa‑CCCCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCACTTTCTGGCAAGCGGAAAACGGGGTCTGGCTg < 2:30954/233‑1 (MQ=255) tgtggcaaaaaaaa‑TACCGCCACAGTTTCACTACAACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACTGGGGCTGATTGCCGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCTACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCGCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCaa < 2:499975/240‑1 (MQ=255) cccaaaaaac‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAAcggttgc < 1:316794/247‑1 (MQ=255) caaaaaaaa‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGGCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAAcggttgcg < 2:70373/248‑1 (MQ=255) a‑cacCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCAAAGGAAATGGCGAAACAAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGGCTGGCTGCCATCAACGGATGCGGTTGAGtt > 2:655916/1‑251 (MQ=255) ccccGCCACAGTTTCTCTACCACGGTACGGCAAGACGTTTCCTTGACGAGATTAAAAAACAGGGGCTGATGGCAGGTGAGCGTCACTACGTCCATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCTGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGttt < 2:597725/249‑1 (MQ=255) gCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGGGTTTCTTg > 1:22122/1‑251 (MQ=255) aGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTgg < 2:582451/251‑1 (MQ=255) tctACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGGGTTTCTTGAGTGGTAAggg > 2:294430/1‑251 (MQ=255) gttcGGCAAGCCGGTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGTGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGTGTCTGGCTTACATCAACTGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTccc < 1:310976/248‑1 (MQ=255) tACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGGGGTAAGGGAAACTTCCCt > 2:620936/1‑251 (MQ=255) gTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGt < 2:328066/184‑1 (MQ=255) tccgtGACGAGATAAAAAAACAGGGGCTGATTGCATGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTGCTCGCAAGCGGAAAAAGGGGTCTGGCt < 2:341364/183‑1 (MQ=255) tCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCACAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCt > 1:341364/1‑187 (MQ=255) ccTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACt < 1:310442/251‑1 (MQ=255) tGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACtt < 1:554777/249‑1 (MQ=255) gACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGt < 1:294430/250‑1 (MQ=255) aCGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAg < 1:407510/251‑1 (MQ=255) aaaaaaCAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAaata < 1:199129/251‑1 (MQ=255) caaaaCATGGGCTAATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGGTATTTTAACCGTCAA‑AGCACAGGCAATGGCGCAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGAAATCAACGGTTGAGGTTGGGTTTCTTGGGTGGGAAAGGAAGCTTCCCTACTGAAGAGACAACTTgaggcttacata > 2:380198/2‑239 (MQ=255) aaCAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTg < 1:645096/251‑1 (MQ=255) ggtcTGAGTGCAGGTTAGCGTCACTACCTTCTACTCTCTGCTGATGAAGCACCGGCACGCAAAGTGGGAGCAAGACACGGATCTTCTGTTATTTTAACCGTCAA‑AGCACAGGAAATGTCGAATCGAGGCTTCCCTTTCTTGCAAGCTGAAAACGGGGTCTGGCTGACATCAACTGTTGCGGTTGAGTTTCTTGAGTGGTAAAGGAAACTTCCCTCATGAAGTGACCACTTTTAGCTGAAAGAATTGCACtg < 2:593332/248‑1 (MQ=255) cTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGATATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGc > 1:575777/1‑251 (MQ=255) gATTGCAGGTGAGCGTCACTTAGTACAACCCTTTGCTGATGAAGCAACTGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGGCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTGTCTGGCAAGCGGAAAACGGGGTCTGGCTGACAGCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAATCTTCCCTCATGAAGTGACCACTTGTAGCTTAAAAAATTGCACTGTGCt < 2:457731/250‑1 (MQ=255) aTTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCCACGGTTGCGGGTGAGTTTCTTGAGTGGTAAGGGACACTTCCCTCATGAAGTGACCACTTGTAGCTTACATAATTGCACTGTGCTg > 2:82802/1‑250 (MQ=255) gTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATAAACAAcg > 1:88014/1‑251 (MQ=255) cactgctgAGGAAGCAACGGCACGCAAAGTGGGAGCAAGACACTGATCATCTGTTATGTTAACCGGCAAGAG‑ACAGGAAATGGCGAAACGAGGCCTCCCTTTCGGGCAAGCGGAAAACGTGGTCTGGCTTACATCATCGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAAGTGCGCTGTGCAGATAAGTGCAGCAATAAACTAcgccgccg < 2:410203/247‑1 (MQ=255) gaAGCAACGGCACGCAAAGTGGGGGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATAAACAACGCCTCCGCGCCGCagag > 2:10509/1‑249 (MQ=255) gaAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAAtt < 1:430825/200‑1 (MQ=255) gaAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCATCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTATCTTCAATAAtt > 2:430825/1‑200 (MQ=255) caccGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATAAACAACGCCGCCGCGCCGCagagaggagc > 2:136906/4‑247 (MQ=255) aCGGCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGCTTATTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGGAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATAAACAACGCCGCCGCGCCGCCGAGGGTGgcgc > 2:530795/1‑251 (MQ=255) ggCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGGCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATAAACAACGCCGCCGCGCCGCAGAGAGTGGCGCTg < 2:408191/251‑1 (MQ=255) gCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGTAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACTGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTTACCACTTGTAGCTTAaata < 2:313143/188‑1 (MQ=255) gCACGCAAAGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAaata > 1:313143/1‑188 (MQ=255) aaaGTGGGAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGGGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGAACTGTGCTGATAAGCGCAGCAATAAACAACGCCGCCGCGCCGCAGAGAGTGGCGCTGGCAAgcg > 2:259507/1‑251 (MQ=255) ggAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATAAACAACGCCGCCGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATg > 1:645685/1‑251 (MQ=255) ggAGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATAAACAACGCCGCCGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATg < 1:620936/251‑1 (MQ=255) aGCAAGACACGGATCGTCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATAAACAACGCCGCCGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGtt > 1:244299/1‑251 (MQ=255) gACACTGATCGGTGGTTATTTTAACCGGCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTGTCTGGCAAGCGGAAAACGGGGTCTGGCTGACAGCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCAAGAAGTGACCACTTGTAGCTTAAATAAGTGCACTGTGCTGATAAGCTCAGCAATAAACAACGCCGCCGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCAtt < 2:124640/251‑1 (MQ=255) | AAAAAGCGTTTTAGTTATTCCAGTGATGGTAGGTGCATCCGCGCGGTTCAGGGGCATTCGACTTCGCAGGTCGCTATTTCCTTTGCCGAAAAAA‑CACCGCCACAGTTTCTCTACCACGGTACGGCAAGCCGTTTCCTTGACGAGATAAAAAAACAGGGGCTGATTGCAGGTGAGCGTCACTACGTACATCTCTCTGCTGATGAAGCAACGGCACGCAAAGTGGGAGCAAGACACGGATCGCCGGTTATTTTAACCGTCAA‑AGCACAGGAAATGGCGAAACGAGGCCTCCCTTTCTGGCAAGCGGAAAACGGGGTCTGGCTGACATCAACGGTTGCGGTTGAGTTTCTTGAGTGGTAAGGGAAACTTCCCTCATGAAGTGACCACTTGTAGCTTAAATAATTGCACTGTGCTGATAAGCGCAGCAATAAACAACGCCGCCGCGCCGCAGAGAGTGGCGCTGGCAAGCGCCGATGTTCCATT > NC_000913/4561128‑4561607 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |