| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 65,905 | C→T | D216N (GAT→AAT) | araD ← | L‑ribulose‑5‑phosphate 4‑epimerase AraD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 65,905 | 0 | C | T | 97.1% | 220.7 / ‑1.6 | 70 | D216N (GAT→AAT) | araD | L‑ribulose‑5‑phosphate 4‑epimerase AraD |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base T (40/28); total (41/29) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.44e-01 | |||||||||||
CAAGCGTAACCTGCAACGGCCCGTTGTCCGTCGCCAGCCAGAAGGAGACTTCTGTCCCT‑TGCGGGGTGTCCCGCCAGTGTCGGGTTAAGATAAAACCTGCCTGCGCCACGCTGAAAATCCATCAAAAAACCAGGCTTGAGTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATC‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCCCATGCAAACGGGCCGTGGGAATGGACCAGAACGCCGGGCATTTGCGCTGCATCGATACCCTGTTTTTCAAAGGTTTCTACGATGACGTTACCGGTTTCCCACTCATATTCGCCGTTGATTTCTGCGTC > NC_000913/65672‑66151 | caaacGTAACCTGCAACGGCCCGTTGTCCGCCGCCAGCCAGAAGGAGACTTCTGTCCCT‑TGCGGGGTGTCCCGCCAGTGTCGGGTTAAGATAAAACCTGCCTGCGCCACGCTGTAATTCCATCAAAAAACCAGGCTTGATTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑a < 1:587924/247‑1 (MQ=255) aaCCTGCAACGGCCCGTTGTCCGTCGCCAGCCAGAAGGAGACTTCTGTCCCT‑TGCGGGGTGTCCCGCCAGTGTCGGGTTAAGATAAAACCTGCCTGCGCCACGCTGTAATTCCATCAAAAAACCAGGCTTGATTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCgg < 1:89367/251‑1 (MQ=255) gCAACGGCCCTTTGTCCTGCGCCAGCCAGAAGGAGACTTCTGTCCCT‑TGCGGGGTTTCCCGCCAGTGTCGGGTTAAGATAAAACCTGCCTGCGCCACGCTGTAATTCCATCAAAAAACCAGGCTTGATTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTaa < 1:303213/249‑1 (MQ=255) tcccgatcttggcccGTCCCCAGCCAGAAGGAGACTTC‑GGCCCTGTGCGGGTTGTCCCGCCATTGTCGGGTTAAGATAAAACCTGCCTGCGCCACGCTGTAATTCCATCAAAAAACCAGGCTTGATTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTg < 2:444271/237‑1 (MQ=255) cccGTTGTCCGTCGCCAGCCAGAAGGAGACTTCTGTCCCT‑TGCGGGGTGTCCCGCCAGTGTCGGGTTAAGATAAAACCTGCCTGCGCCCCGCTGTAATTCCATCAAAAAACCAGGCTTGATTATACCCTGGTTTCGTGTGATTGGCTGCGGTTTTATACAGCCATTACTGCCCCTAATATGCCTTTGCTCCCTGCTTCAGC‑AGATAGACTTTATT‑CAGCAGCGATCGCTGCCAT‑TCCGGCAACTGCGgcgc > 1:42895/1‑251 (MQ=255) ttGTCCGTCGCCAGCCAGAAGGAGACTTCTGTCCCT‑TGCGGGGTGTCCCGCCAGTGTCGGGTTAAGATAAAACCTGCCTGCGCCACGCTGTAATTCCATCAAAAAACCAGGCTTGATTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTg > 1:444271/1‑241 (MQ=255) gTCCGTCGCCAGCCAGAAGGAGACTTCTGTCCCT‑TGCGGGGTGTCCCGCCAGTGTCGGGTTAAGATAAAACCTGCCTGCGCCACGCTGTAATTCCATCAAAAAACCAGGCTTGATTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTg > 1:376790/1‑251 (MQ=255) cccGTCGCCAGCCAGAAGGAGACTTCTGTCCCT‑TGCGGGGTGTCCCGCCAGTGTCGGGTTAAGATAAAACCTGCCTGCGCCACGCTGTAATTCCATCAAAAAACCAGGCTTGATTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGa < 1:533309/250‑1 (MQ=255) aGGAGACTTCTGTCCCT‑TGCGGGGTGTCCCGCCAGTGTCGGGGTAAGATAAAACCTGCCTGCGCCCCGCTGTAATTCCATCAAAAAACCAGGCTTGATTATAGCCCAGTTTCGTTTTATTTGCTGTGGTTTTATAAAGGCATTACTGACCGTAATATGCCTTCGCGCCATTCTTTCGCCAG‑TAGTTTTTTTTTCA‑CAGCTGTTGCTGC‑ATATCCGGGTACTTCGGCGCTAACTGACGGCAGaaattccccc > 2:458397/1‑243 (MQ=255) aGGAGACTTCTCTCCCT‑TGCGCGGTGTCCCCACAGCGTCGGGTTAAGCTAAAACCTGCCCTCGCCACGCAGCAATTCCCTCACCAAACCAGGCTTGATTATAGCCTGGTTTCGCTTGAATGGCTGTGGTTTTATAAAATAATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑ATATAGAGTTTATT‑CAGAAGCGTTTGGTGC‑ATCTCCGGTAACTGCGGCGCCAACAGAAGGCAGAatttcaccc > 2:653594/1‑244 (MQ=255) gTCCCT‑TGGGGGGTGACCCGCCAGTGTCGGGTTAAGATAAAACCTGCCTGCGCCACGCTGTAATTCCATCAAAAAACCAGGCTTGATTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGGGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGa < 1:400670/249‑1 (MQ=255) gTCCCT‑GGGGGGGTGTCCCGCCAGTGGCGGGTTAAGATAAAACCGGCCTGCGCCACGCTGTAATTCCATCAAAAAACCAGGCTTGATTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGAcc < 2:114550/251‑1 (MQ=255) gggggTGCCCCGACAGTGTCGGGTTAAGATAAAACCTGCCTGCGCCACGCTGTAATTCCATCAAAAAACCAGGCTTGATTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAg < 2:276447/250‑1 (MQ=255) gggTGTCCCGCCAGTGTCGGGTTAAGATAAAACCTGCCTGCGCCACGCTGTAATTCCATCAAAAAACCAGGCTTGATTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTTTT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGc > 1:476957/1‑250 (MQ=255) tgtCCCGCCAGTGTCGGGTTAAGATAAAACCTGCCTGCGCCACGCTGTAATTCCATCAAAAAACCAGGCTTGATTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACg > 1:35960/1‑250 (MQ=255) cccGCCAGTGTCGGGTTAAGATAAAACCTGCCTGCGCCACGCTGAAAATCCATCAAAAAACCAGGCTTGAGTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATC‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATgg < 1:39847/251‑1 (MQ=255) cccGCAAGTGTCGGGTTAAGATAAAACCTGCCTGCGCCACGCTGTAATTCCATCAAAAAACCAGGCTTTATTATAGCCTGGTTGCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTGCCAGCACGATgg < 1:572596/251‑1 (MQ=255) cacgtggagggTTACGATAACACCTGCCTGCGCCACGCTGTAATTCCATCAAAAAACCAGGCGTGATTATAGACTGTGTTCTTTTGATTGGCTGTGGTTTTATACAGGCATTACTGCCCGTAATATGCCGTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCAGATAAGCGTCCTCTTCCAGCGCGATGGCGtt < 2:119869/243‑1 (MQ=255) tgtCGGGTTAAGATAAAACCTGCCTGCGCCACGCTGAAAATCCATCAAAAAACCAGGCTTGAGTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATC‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGc > 1:214703/1‑251 (MQ=255) gTTAAGATAAAACCTGCCTGCGCCACGCTGTAATTCCATCAAAAAACCAGGCTTGATTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGc > 1:707532/1‑250 (MQ=255) ttAAGATAAAACCTGCCTGCGCCACGCTGTAATTCCATCAAAAAACCAGGCTTGATTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCAt > 2:143621/1‑251 (MQ=255) aaGATAAACCCTTCCGGCGCCACGCTGTAATTCCATAAAAAAACCAGGCGTGATTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCCCCGCATcg < 2:642351/251‑2 (MQ=255) gATAAAACCTGCCTGCGCCACGCTGTAATTCCAGCAAAAAACCAGGCTTGATTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTc < 1:466218/251‑1 (MQ=255) aCCTGCCTGCGCCACGCTGTAATTCCATCAAAAAACCAGGCTTGATTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACCGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCAtt > 1:265468/1‑251 (MQ=255) ctgcctgcGCCACGCTGTAATTCCATCAAAAAACCAGGCTTGATTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGCATATCCCCATATAAGCGACCTCTTCCAGCACACTGGCGTTATGCACCGCATCTTCGGCTtttt > 2:147062/1‑251 (MQ=255) tgcctgcGCCACGCTGTAATTCCATCAAAAAACCAGGCTTGATTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATCTAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCAttttt > 2:291300/1‑251 (MQ=255) cGCTGTAATTCCATCAAAAAACCAGGCTTGATTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCaa > 1:342363/1‑250 (MQ=255) gctgtaattCCATCAAAAAACCAGGCTTGATTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCaaat < 1:680083/243‑2 (MQ=255) gtaattCCATCAAAAAACCAGGCTTGATTATAGCCTGGTTTCGTTTGATTGACAGAGGTTTTATACATTCATTACTGCCCGTAATATGCCTTCGCTCCATGTTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCAGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATACGCGACCTCTTCCACCACGAAGGAGTTATGCACCTCATCTTCGGCCTTTTTGcccaagcaaatggg > 2:274872/6‑240 (MQ=255) cAAAAAACCAGGCTTGATTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGGTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGaa < 1:570850/250‑1 (MQ=255) aaaaaaCCAGGCTTGATTATAGCCTGGTTTCGTTTGTTTGGCTGAGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGA‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGACTATCCCCCTATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCTCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTgagactg > 2:362852/1‑245 (MQ=255) aaaCCAGGCTTGATTATATCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCAGTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGAc < 2:379925/251‑1 (MQ=255) aGGCTTGATTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAgg > 1:37232/1‑249 (MQ=255) ggCTTGATTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCa < 1:645006/211‑1 (MQ=255) ggCTTGATTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCa > 2:645006/1‑211 (MQ=255) ggCTTGATTATAGCCTGGTTTCGTTTGATTGGCTGTGGATTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAggac > 2:307966/1‑248 (MQ=255) tgattataGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGACGCCg > 2:575058/5‑251 (MQ=255) attataGCCTGGTTTCTTTTGATTGGCTGTGGTTTTATACAGTCATTACTGTCCGTAATAGGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCGGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGACGCCggg < 2:196205/249‑1 (MQ=255) ttataGCCTGGTTGCGTTGGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGGAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATGTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCATGACGCCgtg < 2:183663/249‑3 (MQ=255) ccTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGACGCCGGGCATTTgc > 1:60906/1‑251 (MQ=255) ccTGGTGTCGTTTGAGTGGCTGTGGTTGTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTGGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGACGCCGGGCATTTgc < 2:293315/251‑1 (MQ=255) cTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAatat > 1:240384/1‑142 (MQ=255) cTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAatat < 2:240384/142‑1 (MQ=255) tGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGACGCCGGGCATTTgcgc > 1:81994/1‑251 (MQ=255) ggTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGACGCCGGGCATTTGCGCt > 1:432448/1‑251 (MQ=255) cGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGACGCCGGGCATTTGCGCTGcggc > 2:562051/1‑248 (MQ=255) cGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGACGCCGGGCATTTGCGCTGCATc < 1:211556/251‑1 (MQ=255) gattGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGAGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGc > 2:206257/3‑179 (MQ=255) gTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGc < 1:206257/179‑1 (MQ=255) gTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGACGCCGGGCATTTGCGCTGCATCg < 1:223510/251‑1 (MQ=255) gATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGCCGCAGGGCATTTGCGCTGCATCGAtcc > 2:176328/1‑249 (MQ=255) gATTGGCTGTGGTTTTATACAGTCATTACTACCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTTGTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGTCCTCTTCCAGCACGATGGCGTTATTCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGACGCCGGGCATTTGCGCTGCATCGATa < 1:700651/250‑1 (MQ=255) ggCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCAcc > 1:377804/1‑169 (MQ=255) ggCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCAcc < 2:377804/169‑1 (MQ=255) gTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGACGCCGGGCATTTGCGCTGCATCGATACCCTGTTTTTcg > 1:490986/1‑250 (MQ=255) ttttATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGACGCCGGGCATTTGCGCTGCATCGATACCCTGTTTTTcg > 2:313620/1‑249 (MQ=255) aCAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGACGCCGGGCATTTGCGCTGCATCGATACCCTGTTTTTCGAAGGttt > 1:666789/1‑251 (MQ=255) aCAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGACGCCGGGCATTTGCGCTGCATCGATACCCTGTTTTTCGAAGGttt > 1:569142/1‑251 (MQ=255) cagtACTGCCCGTAATATGCCTTCGTGCCATGCTTACGC‑AGATAGGGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAAATGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGACGCCGGGCATTTGCGCTGCATCGATACCCTGTTTTTCGAAGGTTTCTAc < 2:376790/247‑1 (MQ=255) cATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGACGCCGGGCATTTGCGCTGCATCGATACCCTGTTTTTCGAAGGTTTCTACg < 1:198701/251‑1 (MQ=255) gCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGCCCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑AGGCAAATTGGCCGTGAGAATGGACCAGGACGCCGGGCATTTGCGCTGCATCGATACCCTGTTTTTCGAAGGTTTCTACGATGACg < 1:668198/250‑1 (MQ=255) tAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGACGCCGGGCATTTGCGCTGCATCGATACCCTGTTTTTCGAAGGTTTCTACGATGACGTTACCg > 1:589576/1‑251 (MQ=255) tGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGACGCCGGGCATTTGCGCTGCATCGATACCCTGTTTTTCGAAGGTTTCTACGATGACGTTACCGGTTTc > 1:483868/1‑251 (MQ=255) cATGCTTACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGAAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGACGCCGGGCATTTGCGCTGCGTCGCTACCCTGTTTTTCGAAGGTTTCTACGATTACGTTACCGGTTTCCCACTCATAtt > 2:580880/1‑251 (MQ=255) tACGC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGACGCCGGGCATTTGCGCTGCATCGATACCCTGTTTTTCGAAGGTTTCTACGATGACGTTACCGGTTTCCCACTCATATTCACCGt > 1:465789/1‑251 (MQ=255) gC‑AGATAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGACGCCGGGCATTTGCGCTGCATCGATACCCTGTTTTTCGACGGTTTCTACGATGACGTTACCGGTTTCCCACTCATATTCACCGTTgt > 2:574158/1‑250 (MQ=255) tAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGACGCCGGGCATTTGCGCTGCATCGATACCCTGTTTTTCGAAGGTTTCTACGATGACGTTACCGGTTTCCCACTCATATTCACCGTTGATTTCt > 1:403651/1‑251 (MQ=255) tAGTGTTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGACGCCGGGCATTTGCGCTGCATCGATACCCTGTTTTTCGAAGGTTTCTACGATGACGTTACCGGTTTCCCACTCATATTCACCGTTGATTTCt > 1:189197/1‑251 (MQ=255) gtTTATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGACGCCGGGCATTTGCGCTGCATCGATACCCTGTTTTTCGAAGGTTTCTACGATGACGTTACCGGTTTCCCACTCATATTCACCGTTGATTTCTGCGt > 1:14487/1‑251 (MQ=255) tttATT‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCC‑ATGCAAATGGGCCGTGAGAATGGACCAGGACGCCGGGCATTTGCGCTGCATCGATACCCTGTTTTTCGAAGGTTTCTACGATGACGTTACCGGTTTCCCACTCATATTCACCGTTGATTTCTGCGTc > 1:72530/1‑251 (MQ=255) | CAAGCGTAACCTGCAACGGCCCGTTGTCCGTCGCCAGCCAGAAGGAGACTTCTGTCCCT‑TGCGGGGTGTCCCGCCAGTGTCGGGTTAAGATAAAACCTGCCTGCGCCACGCTGAAAATCCATCAAAAAACCAGGCTTGAGTATAGCCTGGTTTCGTTTGATTGGCTGTGGTTTTATACAGTCATTACTGCCCGTAATATGCCTTCGCGCCATGCTTACGC‑AGATAGTGTTTATC‑CAGCAGCGTTTGCTGC‑ATATCCGGTAACTGCGGCGCTAACTGACGGCAGAATATCCCCATATAAGCGACCTCTTCCAGCACGATGGCGTTATGCACCGCATCTTCGGCATTTTTGCCCCATGCAAACGGGCCGTGGGAATGGACCAGAACGCCGGGCATTTGCGCTGCATCGATACCCTGTTTTTCAAAGGTTTCTACGATGACGTTACCGGTTTCCCACTCATATTCGCCGTTGATTTCTGCGTC > NC_000913/65672‑66151 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |