| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,410,419 | G→A | L312L (CTG→TTG) | yfbS ← | putative transporter YfbS |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,410,419 | 0 | G | A | 98.6% | 232.7 / NA | 74 | L312L (CTG→TTG) | yfbS | putative transporter YfbS |
| Reads supporting (aligned to +/- strand): ref base G (0/1); major base A (32/40); minor base C (1/0); total (33/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.52e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ATACCGATCAGTTTCCAGTTACCCACAACCAGGATGATATCGCCCAGCAGCAGAGGCTCATCCGCCAGCGAACCTTCCAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑GTACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAACGCCGCCAGCGTTCAACACCGATGACGTTAGCGCCATAACGCTCACGTAATTTGAGATCATCCAGCCGTTGACCAATCATTGGCGATCCGGGGCGAATAGCCAGACGTCGC > NC_000913/2410181‑2410663 | aTACCGATCAGTTTCCAGTTACCCACAACCAGGATGATATCGCCCAGCAGCAGAGGCTCATCCGCCAGCGAACCTTCCAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTc < 1:164540/251‑1 (MQ=255) cAGTTTCCAGTTACCCACAACCAGGATGATATCGCCCAGCAGCAGAGGCTCATCCGCCAGCGAACCTTCCAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAAtt > 2:22148/1‑251 (MQ=255) cgTTTCCAGTTACCCACAACCAGGATGATATCGCCCAGCAGCAGAGGCTCATCCGCCAGCGAACCTTCCAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTg < 1:226353/250‑1 (MQ=255) ttCCAGTTACCCACAACCAGGATGATATCGCCCAGCAGCAGTGGCTCATCCGCCATCGAACCTTCCAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGAGCACCGATTTACCAATCAGTTCTGACTCAGCAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGACCTGGCCAGAAAAATACTCTCCGCGCA‑ATACCAACGGCCCCAGCAATTtctc > 2:73202/1‑251 (MQ=255) ttCCAGTTACCCACAACCAGGATGATATCGCCCAGCAGCAGAGGCTCATCCGCCAGCGAACCTTCCAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTc > 1:409538/1‑251 (MQ=255) tcccaggtgcccACATCCGGGAGGATATCGCCCAGCAGCAGAGTCTCATCCGCCAGCGAACCTTCCAGCGCCACGTCATTGCGCGTGAGCCCCACCACATTCAGCCCGTAGCGGGTACGAAAACTAAGTTCGCACACCGATTTACCAATCATTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCTCGCA‑ATTCCATCGGCTCCAGCAATTGcg < 2:596042/241‑2 (MQ=255) ccAGTTACCCACAACCAGGATGATATCGCCCAGCAGCAGAGGCTCATCCGCCAGCGAACCTTCCAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCTACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCAc < 1:141507/251‑1 (MQ=255) cAGTTTCCCACAACCAGGATGATAGCGTCCCGCAGCAGAGGCTCATCCGCCAGCGAACCTTCCAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACt < 2:474319/251‑1 (MQ=255) cAGTTCCCCTCAACCAGGAGGATATCGCCCAGCAGCAGAGGCTCATCCGCCAGCGAACCGTCCAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACt < 1:479225/251‑1 (MQ=255) gTTACCCACAACCAGGATGATATCGCCCAGCAGCAGAGGCTCATCCGCCAGCGAACCTTCCAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTAc < 1:705117/251‑1 (MQ=255) ttACCCACAACCAGGATGATATCGCCCAGCAGCAGAGGCTCATCCGCCAGCGAACCTTCCAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTAc > 1:264176/1‑250 (MQ=255) tACCCACAACCAGGATGATATCGCCCAGCAGCAGAGGCTCATCCGCCAGCGAACCTTCCAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTGAGAAAAATACTCGCCGCGCA‑ATACCATCAGCTCCAGCAATTGCTCACTACa > 1:459843/1‑250 (MQ=255) aCCCACAACCAGGATGATATCGCCCAGCAGCAGAGGCTCATCCGCCAGCGAACCTTCCAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACaa < 1:164556/250‑1 (MQ=255) aaCCAGGATGATATCGCCCAGCAGCAGAGGCTCATCCGCCAGCGAACCTTCCAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGcc > 1:567711/1‑251 (MQ=255) cAGGATGATACCGCCCAGCAGCAGCGGCTCAGCCGCCAGCGAACCTTCCAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAAGTGCTCACTACAAAATTGCCGga < 2:567711/251‑1 (MQ=255) gatgatATCGCCCAGCAGCAGAGGCTCATCCGCCAGCGAACCTTCCAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCa > 2:521052/1‑221 (MQ=255) gatgatATCGCCCAGCAGCAGAGGCTCATCCGCCAGCGAACCTTCCAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCa < 1:521052/221‑1 (MQ=255) cgcagcagGGGCTCACCCGCCAGCGAACCTCCCCGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGc < 2:353588/250‑1 (MQ=255) gcagAGGCTCATCCGCCAGCGAACCTTCCAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGAc < 1:419534/251‑1 (MQ=255) agagGCTCATCCGCCAGCGAACCTTCCAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACat > 1:395320/1‑251 (MQ=255) cacccGCCAGCGAACCTGCCAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCTGCAGACATATCAAt < 2:90956/247‑1 (MQ=255) cATCCGCCAGCGAACCTGCCAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGTGTACGAAAACCAATTTCGCGCACCGATTTATCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGTTCAGAAAAATTCTCGCCGCGCA‑ATACCATCGGCTCCAGCAATGGCTCACTATAAAATTGCCGGAGATCGACATCAGCCGCTGACATATCAAt < 1:400436/250‑1 (MQ=255) gCCAGCGAACCTTCCAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCa > 2:523350/1‑250 (MQ=255) gCCAGCGAACCTTCCAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCa > 1:625484/1‑250 (MQ=255) cAGCGAACCTTCCAGCGCCACGCCATTGCGCTTTAGCCCCACCACCTTCAGTCCGTAGCGGGTACGAAAACCAATTTCCCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑CTACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCaaa > 1:664942/1‑250 (MQ=255) gAACCTTCCAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTc > 2:278839/1‑251 (MQ=255) ccAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCAcgcgcg < 1:472200/251‑1 (MQ=255) ccAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCAcgcgcg < 1:91045/251‑1 (MQ=255) ccacgccaTTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAAt < 1:523350/251‑1 (MQ=255) tAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTa > 1:144792/1‑250 (MQ=255) aGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAAc > 1:367623/1‑251 (MQ=255) cccACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGAGCGAAGTTAAAAAACCCCATTAACgat > 2:293100/1‑249 (MQ=255) ccaccaCATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTc > 2:582632/1‑251 (MQ=255) caTTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATa < 1:48604/251‑1 (MQ=255) tCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAAc < 1:390178/250‑1 (MQ=255) cAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGCTTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGCCATCAGCCGCAGACCTATCa > 2:88991/1‑193 (MQ=255) cAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCa < 1:88991/193‑1 (MQ=255) cAGTCCGTAGCGGGTAAGAAAACCAATTTCGCGCGACGATTTACCAATCAGTTCAGACTCAGGAATTAATGAAATCTCTTCCAAGCCCACATCAA‑GGGCCTGGTCAAAAAAAGACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCATCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATACAGAAACCCCATTAACGTTCACGATAAcg < 2:286740/250‑1 (MQ=255) ccGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAAtt < 2:380156/217‑1 (MQ=255) ccGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAAtt > 1:380156/1‑217 (MQ=255) cGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTACCGATCACGATAACGcgacg > 1:54597/1‑250 (MQ=255) gTAGCGGGTACGAAAACCCATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGACATTCAGAAACCCCATTAACGTTCACGATAACGcgacga > 2:116886/1‑250 (MQ=255) gggTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGCTAACGCGACGAAAAcgc > 1:511223/1‑251 (MQ=255) gTACGAAAACCAATTTCGCGCACCGATTTACCAAACAGTTCTGACTCAGGAAATAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAAcgccg < 2:267006/251‑1 (MQ=255) ccAATTTCGCGCACCGATTTACCAATCAGTTCTGACTAAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACACAATTGCCGGAGATCGACATCAGCCGCAAACATATCAATAAGCAAAACGTCACGCGCGCGGAATTCAGAAACCCCATTAAAGTTGACGATAACGCGACGACAACGCCGCCAGCGTTc > 2:214181/1‑251 (MQ=255) cAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAACGCCGCCAGCGTTc > 1:171047/1‑250 (MQ=255) attgcgcgCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACACCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAACGCCGCCAGCGTTCAac < 2:264176/247‑1 (MQ=255) cgcgCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAACGCCGCCAGCGTTCAACCCCg > 2:528635/1‑251 (MQ=255) gATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAACGCCGCCAGCGTTCAACACCGATGACGtt < 1:711089/251‑1 (MQ=255) tACCAATAAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGATCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATCCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAACGCCGCCACCGTTAAACAACGATGACGTAAgcg > 2:451089/1‑251 (MQ=255) ccAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAACGCCGCCAGCGGGAAACACCGATGaaggtagagaa < 1:582055/251‑11 (MQ=255) aTCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAACGCCGCCAGCGTTCAACACCGAGGACGTTAGCGCCATa < 1:538182/251‑1 (MQ=255) ccgTTCTGACTCATGAAATAAGGAAACCTATTCCATGACCCCATTAACGGGCATGG‑CAGAAAAATTATCGCCCCGCA‑ATACCATCGGCGCCAGCAATTGCTCACTACAAAATGGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAACTCCGCCAGCGTTCAACATCGATGACGATAGCGCCATAAc < 2:638910/249‑1 (MQ=255) tCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCCCGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAACGCCGCCAGCGTTCAACACCGATGACGTTAGCGCCATAACGCTc > 2:696213/1‑251 (MQ=255) catgAATTAATGAAATCTCTGCCCTGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCACTTGCTCACTACACAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAACGCCGCCAGCGTTCAACACCGATGACGTTAGCGCCATAACGCACACGTAAt > 2:52327/4‑251 (MQ=255) aaTGAAACCCCTGCCAAGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTACCCGCGCA‑ATACCAGCGGCTCCTGCAATTGCGCACTACAAAATTGCCGGAGATCGACAACAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCCGAACCCCCATTAACGTTCACGATAACGCGACGAAACCGCCGCCAGCGTTCAACACCGATGACGTTAGCGCCATAACGCGCACGGAATTTGAGatc < 2:250001/251‑1 (MQ=255) ctctGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAACGCCGCCAGCGTTCAACACCGCTGACGTTAGCGCCATAACGCTCACGTAATTTGAGATCATCCAGcc > 1:641934/1‑251 (MQ=255) cccggcccggccccactCAA‑GGGCCCGGGCAGAAAAATACTCGCCGCTCA‑ATACCATCGGCTCCAGCAATTGCTAACTACAAAAGTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAACGCCGCCAGCGTGCAACCCCGATGCCGTTAGCGCCATAACGCTCACGTAATTTGAGATCATCCAGcc < 2:127566/235‑1 (MQ=255) ctGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAACGCCGCCAGCGTTCAACACCGATGACGTTAGCGCCATAACGCTCACGTAATTTGAGATCATCCAg < 1:16972/247‑1 (MQ=255) ctGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAACGCCGCCAGCGTTCAACACCGATGACGTTAGCGCCATAACGCTCACGTAATTTGAGATCATCCAg < 1:520954/247‑1 (MQ=255) aTGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAACGCCGCCAGCGTTCAACACCGATGACGTTAGCGCCATAACGCTCACGTAATTTGAGATCATCCAGCCGTTGAcc > 1:680173/1‑251 (MQ=255) ccACATCAA‑GGGCCTGGACAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAACGCCGCCAGCGTTCAACACCGATGACGTTAGCGCCATAACGCTCACGTAATTTGAGAGCATCCAGCCGTTGACCAATc < 1:546828/251‑1 (MQ=255) ccACATCAA‑GGGCCCGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAACGCCGCCAGCGTTCAACACCGATGACGTTAGCGCCATAACGCTCACGTAATTTGAGATCATCCAGCCGTTGACCAATc < 1:116886/251‑1 (MQ=255) cTGGTCAGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAACGCCGCCAGCGTTCAACACCGATGACGTTAGCGCCCTAACGCTCACGTAATTTGAGATCATCAAGCCGTTGACCAATCATTGGCGATCCgg > 2:558533/1‑251 (MQ=255) ggTCAGAAAAATACCCGCCGCGCAAGCCCCA‑CGGCGCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGAAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACTAAAACGCCGCCAGCGTTCAACACCGACGACGTTAGCGCCATAACGCTCACGTAATTTGAGATAATCCAGCCGTTGACCAATCATTGGCGATCCgg < 2:531331/249‑1 (MQ=255) atctaGAAAAATAAGCGCCGCGCA‑AAACCAACGGCTCAAGCAATTGCTCAATAAAAAATTGCCGGAGATCGACAACAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGATCACGATAACGCGACGAAAACGCCGCCAGCGTTCAACACCGATGACGTTAGCGCCATAACGCTCACGGAATTTGAGATCATCCATCCGTTGACCAATCATTGGCTATCCgg < 2:468742/245‑1 (MQ=255) aGAAAAATACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAACCCCCATTAACGTTCACGATAACGCGACGAAAACGCCGCCAGCGTTCAACACCGATGCCGTTAGCGCCATCACGCTCACGTAATTTGAGATCATCCAGCCGTTGACCAATCATTGGCGATCCgg > 1:468742/1‑245 (MQ=255) aaaaaTACTCGCAGCGCA‑ATACCCTCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGCGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAACGCCGCCAGCGTTCAACACCGATGACGATAGCGCCATAACGCTCACGTAATTTGAGCTCATCCAGCCGTTGACCAATCATTGGCGATCCGGGGCGAAt > 2:615108/1‑250 (MQ=255) aaaaTACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAACGCCGCCAGCGTTCAACACCGATGACGTTAGCGCCATAACGCTCACGTAATTTGAGATCATCCAGCCGTTGCCCAATCATTGGCGATCCGGGGCGact > 2:317351/1‑247 (MQ=255) aaaaTACTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAACGCCGCCAGCGTTCAACACCGATGACGTTAGCGCCATAACGCTCACGTAATTTGAGATCATCCAGCCGTTGACCAATCATTGGCGATCCGGGGCGAATAg < 1:528635/251‑1 (MQ=255) aaaaTACACTCCGCGCA‑ATACCATCGGCTCCAGCAATGGCTCACTACAAACTGGCCGGAATTCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCAGTAACGGTCACGATAACTCGACGAAAACGCCGCCAGCGTTCAACACCGATGACGTTAGCGCCATAACGCTCACGGAAGTTGAGATCATCCAGCCGTTGACCAATCATTGGCGATCCGGGGCGAAttg < 2:395320/251‑3 (MQ=255) aCTCGCCGCGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAACGCCGCCAGCGTTCAACACCGATGACGTTAGCGCCATAACGCTCACGTAATTTGAGATCATCCAGCCGTTGACCAATCATTGGCGATCCGGGGCGAATAGCCAg < 1:45920/250‑1 (MQ=255) cgccgcGCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAACGCCGCCAGCGTTCAACACCGATGACGTTAGCGCCATAACGCTCACGTAATTTGAGATCATCCAGCCGTTGACCAATCATTGGCGATCCGGGGCGAATAGCCAGAc < 1:22148/249‑1 (MQ=255) cgcgCA‑ATACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAACGCCGCCAGCGTTCAACACCGATGACGTTAGCGCCATAACGCTCACGTAATTTGAGATCATCCAGCCGTTGACCAATCATTGGCGATCCGGGGCGAATAGCCAGACGTcgc < 1:356621/251‑1 (MQ=255) | ATACCGATCAGTTTCCAGTTACCCACAACCAGGATGATATCGCCCAGCAGCAGAGGCTCATCCGCCAGCGAACCTTCCAGCGCCACGCCATTGCGCTTTAGCCCCACCACATTCAGTCCGTAGCGGGTACGAAAACCAATTTCGCGCACCGATTTACCAATCAGTTCTGACTCAGGAATTAATGAAATCTCTGCCATGCCCACATCAA‑GGGCCTGGTCAGAAAAATACTCGCCGCGCA‑GTACCATCGGCTCCAGCAATTGCTCACTACAAAATTGCCGGAGATCGACATCAGCCGCAGACATATCAATAAGCAAAACGTCACGCGCGCGAAATTCAGAAACCCCATTAACGTTCACGATAACGCGACGAAAACGCCGCCAGCGTTCAACACCGATGACGTTAGCGCCATAACGCTCACGTAATTTGAGATCATCCAGCCGTTGACCAATCATTGGCGATCCGGGGCGAATAGCCAGACGTCGC > NC_000913/2410181‑2410663 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |