| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 73,445 | C→A | L359L (CTG→CTT) | thiP ← | thiamine ABC transporter membrane subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 73,445 | 0 | C | A | 93.8% | 172.2 / NA | 66 | L359L (CTG→CTT) | thiP | thiamine ABC transporter membrane subunit |
| Reads supporting (aligned to +/- strand): ref base C (4/0); new base A (54/7); total (59/7) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GACTGACATAACATGCTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGCACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGTGGCAGGCCGATAGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCACCTGACCCGCCAGCATTTTCTGCCGCGCCCGCAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCAACTGGCGATTTACCCCATCGACGATCACCGCCAGTAACGGTGGCAGCAACAGCAGCAGCGCCAGCACAATTAACACCGTGTCGCAAATGCGGCTATGCAGACGATCGTCCGGGTCGCGCCAG > NC_000913/73200‑73691 | gACTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTc > 1:628589/1‑251 (MQ=255) aCTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCACCTGACCCGCCAGCATTTTCTGCCGCCCCCGAAGTTcg > 2:322371/1‑251 (MQ=255) atacTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCCTCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGCCTGCTcc > 1:130781/4‑250 (MQ=255) tacTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATAAACCTGCCGCTCATCTCCAGCGCCTGACCCGCCAGCCTTTTCTGCCCCGCCCGAAGTTCGCGACTGCTccct > 2:71379/3‑249 (MQ=255) gTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGGTCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCACTGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGACCAA‑TCCCCGGCATGGCGAGGTTCAACATGCCGCTCATCTCAAGCGCCTGACCCGCCAGCATTTTCAGCCGCGCCCGAAGTTCGCGACGGCTACAtcac > 2:27616/1‑247 (MQ=255) gggcggTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGACCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGAAGATGGCGGCAGGCCAATGGTG‑TTGTTGAGCATAAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGcatc < 1:251620/251‑1 (MQ=255) gATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAAGGATAGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAAGGGTG‑TTGGTGAGCAGTAAAAAGAA‑GCCGGTCGCC‑AGGACAA‑TCCCCGGCATGGCGAGGATCAACATGCAGCTCATCTCCAGCGCCCGACCAGCCAGCATTTTCTACAGAGCCAGGAGTACGCGACGGCTCCATAGCAGAATCATGGTc > 2:368314/1‑250 (MQ=255) atCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGc > 1:108139/1‑250 (MQ=255) gcgcATCGGGTTTTCCAGTACTTTCAGCGCCTAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCCCAATGCCGTCAGCAGATTGCGGCAGGCCAATGGGG‑TTGTTGAGCAGTAAAACGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGCGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCCTTTTCTGCCGCGCCCGCACTTCGCGCCCGCTCCCTAGCCGCCTCCTGGTCAGccac > 2:77243/1‑247 (MQ=255) cgcATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTAc > 1:168520/1‑251 (MQ=255) cGGGGTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGGG‑TTGTTGAGCAGAAAAAAGAA‑GCCGGGAGCC‑AGCACAA‑TCCCCGGCATGGCGGGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CCACGcac > 1:124368/1‑250 (MQ=255) gTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCCGCA‑CTACGCACAAt > 1:492711/1‑250 (MQ=255) tttCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCCGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGATCCCTAGCAGCATCATGGTCAGCA‑CTACGCCCAATac > 1:710645/1‑250 (MQ=255) ttcccagttcttacggcgcATAAGGGATCGC‑ATATAACGTATGGGTAAAAATCACAGTGCCTGCAGCAGATGGCGGCAGCCCAATGGTG‑TTGTTGAGCATAAAAAAGAG‑GCCGGTAGCC‑AG‑ACAACTCCCCGGCATGGCGAGTATCAACATGCCTCCCCTCTCCAGCGCCTGCCCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATac < 2:560012/235‑1 (MQ=255) cagtaCTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCAGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCAGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTATGCCGCGCCCGAAGTTCGGGACTGCTCCATAGCAGCATCATGGACAGCA‑CTACGCACAATACACCtt > 2:498160/5‑250 (MQ=255) taCTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTgccc > 1:170675/2‑250 (MQ=255) cAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGCG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAgcc > 2:110044/1‑250 (MQ=255) cgaaTAAGGGATCCCCAT‑TACTCCATTGGTAAAAATCACAATGCCGCCAGCAGCTTGCGGC‑GGGCAATGGGGGTGGTTGAACAG‑AAAAAGAAAGCGGGTGCCC‑ACCACAA‑CCCCCGGCATGGCGAGACCCAACATGCCGCTCATCTCCAGCGCTGGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CGACGCACAATACACCTGCCGCCAGCGCaa < 2:31981/248‑1 (MQ=255) gcATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGTTGCAGGCCGATAGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCCCAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCACCTGACCCGCCAGCATTTTCTGCCGCGCCCGCAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAAt > 1:315422/1‑251 (MQ=255) gcATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAAt > 1:150998/1‑251 (MQ=255) aTAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAc > 1:534879/1‑251 (MQ=255) gATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACg > 1:172415/1‑251 (MQ=255) gATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACg > 1:361226/1‑251 (MQ=255) gATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACg > 1:378357/1‑251 (MQ=255) aCGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAgc > 1:91573/1‑251 (MQ=255) gCATTGGTGAAAATAACTATGCCGTCAGCAGATTGCGGCAGGCCCATGGTG‑TTGTTGCGCAGTAAACAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCACTCATCTCCACCGCCTGACCCGCCAGCAATTTATGCCGCGCCCGCAGCTCGCGCATGCTCCCTAACCGCATCATGGTCACCAACAACAC‑CAACACCCCTGACGCCAGCGCCATCC‑CCAACGAGGCCcacacccc > 2:618329/1‑247 (MQ=255) aTTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCt > 1:78648/1‑251 (MQ=255) ggTGAAAATCACAATGCCGTCAGCAGATTGCGGGAGGCCAATGGTG‑TTGTAGAGCAGAAAAAAGAA‑GCGGGTAGCC‑AGCACAA‑CCCCCGGCAGGGCGGGGATCAACAGGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGcc < 1:289090/251‑1 (MQ=255) gagAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGCAGTTCGCGACTGCTCCATAGCAGCATCCTGGGCAGCA‑CTACGCACAATACACCTCACGCCCGCGCCACAC‑GCCACGCGGTCCACAgcccccgcc > 2:28280/3‑243 (MQ=255) gAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCCTAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCACCGAGGGCCACAGCGCCTGCcacc > 2:18106/1‑250 (MQ=255) gAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTg > 1:292238/1‑209 (MQ=255) aaaaTCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGGCCAAAGCGCCTGCcac > 1:39739/1‑249 (MQ=255) gATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCACTAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCAACGGATGTGCCCGCACTTc > 2:555823/1‑251 (MQ=255) gggcaggccagtggtgttttggAGCAGTAAAAAGAA‑GCCGG‑AGCCCAGCACAA‑CCCCCGGCATGGGGAGGAAAAACAGGCCCCTCTTCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCa < 1:555823/230‑1 (MQ=255) aGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATCCACATGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCAAcgg > 2:156659/1‑249 (MQ=255) ccaatggtg‑tTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTACCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCCTGGTCAGCA‑CTACGCACCATACACCTGCCGCCAGCGCCATAC‑GCAACGAGGTCCACAGCGCATTCCACACCCCCGGTTGAGCCAGCACTTCCGACAACCGGCg > 2:32313/7‑251 (MQ=255) aGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCAACTGACGATTTAGCCCATCGACGAt > 1:90608/1‑251 (MQ=255) aGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGAATAGCGAGGAAAAACATGCCGCTCATCTCCAGCGCCTGACAAGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCCGCGCAATAC‑GCAACGAGGTCAACAGCGCATGCCACAGCACCGGCTGTGCCAGCCATTCCGGCAACTGGCGATTTATCCCATCGACGAt > 1:308805/1‑251 (MQ=255) tAAAAAGCA‑GCCGAAAGCC‑AGCACAA‑TCCACGTCAGGGCGAGGATAAAAATGCCGCTCATCTCCAACGCCTGACCCGCCAGCATTTTAAGCCGCGCCCGACGATCGCGACTGCTCCTTAGCAGCATCCTGGTCAGCA‑CTACGCACAATACACCTGCCGCCCGCGCAA‑ACAGAAACGAGGTCCACACCGCCGGCAACAGCAACGGTTGAGCCAGCACCTGCGGCAACTGGCCACTTAGCCCATccacgtacc > 2:639821/1‑247 (MQ=255) aaaaaGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCAACTGGCGATTTAGCCCATCGACGATCAc > 1:253242/1‑251 (MQ=255) aagaa‑gCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCAACTGGCGATTTAGCCCATCGACGATCACCGc > 1:429579/1‑251 (MQ=255) tAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATAAACATGCCGCACATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCTCCCGACGCTCGCGACTGCTCCCTAGCAGAATCATGGTCAGCA‑CTACGCACAATCCACCTGCCGCCCGCGCAATCC‑GCAACGAGCTCCACAGCGCCTGCCACCGCACCGGTTGTGCCAGCACTTCCTGCAAAGGGCGATTTAGCCCACCGACGATCCCCCCCAGCAACGGt > 2:433258/1‑251 (MQ=255) c‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCAACTGGCGATTTAGCCCATCGACGATCACCGCCAGCAACGGTGgc > 1:442278/1‑250 (MQ=255) c‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCAACTGGCGATTTAGCCCATAGACGATCACCGCCAGCAACGGTGgc > 2:300624/1‑250 (MQ=255) cacaA‑TCACCGGCCAGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACACGCCAGCATTTTCTGCCGCGCCAGAAGTTCGCGACTGCACCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACAACTGCCGCCAGCGCAACAC‑GCAACGAGGACCAAAGCGCCGGCCAACGCACCGGTTGTGCCAGCACTTCCGGCCACCGGCGCTTTAGCCCATCAACAATCACCGCCAgacacaggtgaaga > 2:340289/1‑237 (MQ=255) acaA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCAACTGGCGATTTAGCCCATCGACGATCACCGACAGCAACGGTGgcagca > 2:72938/1‑250 (MQ=255) a‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGACAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCAACTGGCGATTTAGCCCATCGACGATCACCGCCAGCAACGGTGGCAGCAAc > 1:680889/1‑249 (MQ=255) gCATGGAGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCAGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGAACTTCCGGCAACGGGCGATTTAGCCCATCGAAGATCACCGCCAGCAACGGAGGCAGCGACagcagcagc > 2:525529/1‑251 (MQ=255) gATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCAACTGGCGATTTAGCCCATCGACGATCACCGCCAGCAACGGTGGCAGCAACAGCAGCAGCGCCAGcaca > 1:534243/1‑250 (MQ=255) tGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCAACTGGCGATTTAGCCCATCGACGATCACCGCCAGCAACGGAGGCCGAAATAGCCGCAGCGCCAGCACAATTAACAcc > 2:485717/1‑251 (MQ=255) gCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCAACTGGCGATTTAGCCCATCGACGATCACCGCCAGCAACGGTGGCAGCAACAGCAGCAGCGCCAGCACAATTAACACCg > 1:220389/1‑251 (MQ=255) cGCTCATCTCCAGCGCCTGACCCGACAGCATTTACTGCCGCGCCCGACGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCAACTGGCGATTTAGCCCATCGACGATCACCGCCAGCCACGGTGGAAGCAACAGCAGCAGCGCCAGCACAATTAACACCgtg > 1:242181/1‑251 (MQ=255) gCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCCACTGGCGATTTAGCCCATCGACGATCACCGCCAGCAACGGTGGCAGCACCAGCAGCAGCGCCAGCACAATTaaacccgtgc > 2:591415/1‑243 (MQ=255) cTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCAc > 1:287573/1‑161 (MQ=255) tCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCCTGGTCAGCA‑CTACGCACACTACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGTTTGTGCCAGCACTTCCGGCAACTGGCGATTTAACCCATCGACGATCACCGCCAGCACCGGTGGCAGCAACCGCAGCAGCGCAAGcgaaactagacccgtgtcc > 2:496099/1‑233 (MQ=255) aTCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCAACTGGCGATTTAGCCCACCGCCGATCACCGCCAGCAACGGTGGCAGCCACAGCAGCAGCGCCAGCACACTTAACACCGAGTcccc > 2:647953/1‑248 (MQ=255) tctcCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGCTGTGCCAGCACTTCCGGCAACTGGCGATTTAGCCCGTCGACGCTCACCGCCAGCAACGGAGGCAGCACCAGCAGCAGCGCCCGCCCAATTAACACCGTGTCGCa > 2:97435/1‑250 (MQ=255) ccccagcgcgtcaCCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCAAAGCAGCATCATGGTCAGCA‑CTACGCAAAATACCCCTGCCGCCAGCGCAATAC‑GCAACGAGTTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCAACTGGCGATTAAGCCCATCGACGATCACCGCCAGCAACGGTGGCAGCAACAGCAGCAGCGCCAGCACAATTAACACCGTGTCGCaaa < 1:479102/239‑1 (MQ=255) cAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCAACTGGCGATTTAGCCCATCGACGATCACCGCCAGCAACGGTGGCAGCAACAGCAGCAGCGCCAGCACAATTAACACCGTGTCGCAAATGc > 1:505423/1‑251 (MQ=255) ccTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATCGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCCGCACTTCCGGCAACTGGCGATTTAGCCCACCGCCGCTCACCGCCAGCAACGGTCGCAGCAACAGCAGCAGCGCCCGCACAATTAACACCGGGACGCACATGCggat > 2:230898/1‑248 (MQ=255) ccTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCAACTGGCGATTTAGCCCATCGACGATCACCGCCAGCAACGGTGGCAGCAACAGCAGCAGCGCCAGCACAATTAACCCCGTTGCGCAAATGCGGCt > 2:356275/1‑250 (MQ=255) gACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCAACTGGCGATTTAGCCCATCGACGATCACCGCCAGCAACGGTGGCAGCAACAGCAGCAGCGCCAGCACAATTAACACCGTGTCGCAAATGCGGCTATGc > 1:431524/1‑251 (MQ=255) cccGCCAGCATTTTCTGCGCCGCCCGAAGTTCGCGACTGCCCCATAGCAGCATCAGGGTCAGCA‑CTCCGCACAATCCCCCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCAACTGGCGATTTAGCCCATCGACGATCACCGCCAGCAACGGTGGCAGCAACAGCAGCAGCGCCAGCACAATTAACACCGTGTCGCAAATGCGGCTATGCAg < 1:18106/251‑1 (MQ=255) aGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCAACTGGCGATTTAGCCCATCGACGATCACCGCCAGCAACGGTGGCAGCAACAGCAGCAGCGCCAGCACAATTACAACCGTGTCGCAAATGCGGCTATGCCAACGATc > 2:197318/1‑251 (MQ=255) cTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCAACTGGCGATTTAGCCCATCGACGATCACCGCCAGCAACGGTGGCAGCAACAGCAGCAGCGCCAGCACAATTAACACCGTGTCGCAAATGCGGCTATGCAGACGATCGTCCGGGt > 1:537503/1‑251 (MQ=255) cccGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACCCCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGCCAACTGGCGATTTAGCCCATCGACGATCACCGCCAGCAACGGTGGCCGCAACCTCAGCTGCGCCCGCACACTTACCACCGTCTCGCAACTGCGGCGATTCAGCAGATCGTccagttccccccac > 2:80427/1‑239 (MQ=255) | GACTGACATAACATGCTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGCACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGTGGCAGGCCGATAGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCC‑AGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCACCTGACCCGCCAGCATTTTCTGCCGCGCCCGCAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAC‑GCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCAACTGGCGATTTACCCCATCGACGATCACCGCCAGTAACGGTGGCAGCAACAGCAGCAGCGCCAGCACAATTAACACCGTGTCGCAAATGCGGCTATGCAGACGATCGTCCGGGTCGCGCCAG > NC_000913/73200‑73691 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |