| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 73,328 | G→A | I398I (ATC→ATT) | thiP ← | thiamine ABC transporter membrane subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 73,328 | 0 | G | A | 93.8% | 191.3 / 0.4 | 66 | I398I (ATC→ATT) | thiP | thiamine ABC transporter membrane subunit |
| Reads supporting (aligned to +/- strand): ref base G (3/1); new base A (50/11); total (54/12) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.67e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.93e-01 | |||||||||||
CGCCAAAATCACCAATCGACAGCACGCATGCAAAGGCCAGCGCCTGCGCCAGTGGACGTTTCAGGGCGCGCAGCTCCACCACTTTTAAGCGTGACCAGCCTTCAATCCCCAGCGACTGACATAACATGCTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGCACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGTGGCAGGCCGATAGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCACCTGACCCGCCAGCATTTTCTGCCGCGCCCGCAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATACGCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCAACTG > NC_000913/73087‑73573 | cGCCAAAATCACCAATCGACAGCACGCAGGCAAAAGCCAGCGCCTGCGCCAGTGGACGTTTCAGGGCGCGCAGCTCGACCACTTTTAAGCGCGACCAGCCTTCAATGCCCAGCGACTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGtg‑ttg > 1:628762/1‑251 (MQ=255)cGCCAAAATCACCAATCGACAGCACGCAGGCAAAAGCCAGCGCCTGCGCCAGTGGACGTTTCAGGGCGCGCAGCTCGACCACTTTTAAGCGCGACCAGCCTTCAATGCCCAGCGACTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGtg‑ttg > 1:547762/1‑251 (MQ=255) gCCAAAATCACCAATCGACAGCACGCAGGCAAAAGCCAGCGCCTGCGCCAGTGGACGTTTCAGGGCGCGCAGCTCGACCACTTTTAAGCGCGACCAGCCTTCAATGCCCAGCGACTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGtg‑ttgt > 1:239667/1‑251 (MQ=255) cAAAATCACCAATCGACAGCACGCAGGCAAAAGCCAGCGCCTGCGCCAGTGGACGTTTCAGGGCGCGCAGCTCGACCACTTTTAAGCGCGACCAGCCTTCAATGCCCAGCGACTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑ttgttg > 1:257383/1‑251 (MQ=255) tCACCAATCGACAGCACGCAGGCAAAAGCCAGCGCCTGCGCCAGTGGACGTTTCAGGGCGCGCAGCTCGACCACTTTTAAGCGCGACCAGCCTTCAATGCCCAGCGACTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGc > 1:489217/1‑249 (MQ=255) ccACCAATCGACAGCACGCAGGCAAAAGCCAGCGCCTGCGCCAGTGGACGTTTCAGGGCGCGCAGCTCGACCACTTTTAAGCGCGACCAGCCTTCAATGCCCAGCGACTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAg < 2:702875/250‑1 (MQ=255) ccAATCGACAGCACGCAGGCAAAAGCCAGCGCCTGCGCCAGTGGACGTTTCAGGGCGCGCAGCTCGACCACTTTTAAGCGCGACCAGCCTTCAATGCCCAGCGACTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTaa < 2:595239/251‑1 (MQ=255) cAATCGACAGCACGCAGGCAAAAGCCAGCGCCTGCGCCAGTGGACGTTTCAGGGCGCGCAGCTCGACCACTTTTAAGCGCGACCAGCCTTCAATGCCCAGCGACTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTaaa < 1:574164/251‑1 (MQ=255) gACAGCACGCAGGCAAAAGCCAGCGCCTGCGCCAGTGGACGTTTCAGGGCGCGCAGCTCGACCACTTTTAAGCGCGACCAGCCTTCAATGCCCAGCGACTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCAGCAGGCCACTGGGG‑TTGTTGAGCAGTAAAaaga > 2:358489/1‑250 (MQ=255) aGCACGCAGGCAAAAGCCAGCGCCTGCGCCAGTGGACGTTTCAGGGCGCGCAGCTCGACCACTTTTAAGCGCGACCAGCCTTCAATGCCCAGCGACTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑Gcc > 1:238228/1‑251 (MQ=255) aggCAAAAGCCAGCGCCTGCGCCAGTGGACGTTTCAGGGCGCGCAGCTCGACCACTTTTAAGCGCGACCAGCCTTCAATGCCCAGCGACTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGcc > 1:497060/3‑251 (MQ=255) cAGCGCCTGCGCCAGTGGACGTTTCAGGGCGCGCAGCTCGACCACTTTTAAGCGCGACCAGCCTTCAATGCCCAGCGACTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑Tcc > 1:582967/1‑251 (MQ=255) gcCAGTGGACGTTTCAGGGCGCGCAGCTCGACCACTTTTAAGCGCGACCAGCCTTCAATGCCCAGCGACTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGAAGATTGCGGCAGGCCAATGGGG‑GTTATGAGCAGTAAAAAGAA‑GCAGGTACCCAGCACAA‑TCCCCGGAATGGc > 2:479102/1‑251 (MQ=255) cAGTGGACGTTTCAGGGCGCGCAGCTCGACCACTTTTAAGCGCGACCAGCCTTCAATGCCCAGCGACTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCg > 1:235300/1‑250 (MQ=255) aGTGGACGTTTCAGGGCGCGCAGCTCGACCACTTTTAAGCGCGACCAGCCTTCAATGCCCAGCGACTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCCTGGCg > 1:444623/1‑249 (MQ=255) ggACGTTTCAGGGCGCGCAGCTCGACCACTTTTAAGCGCGACCAGCCTTCAATGCCCAGCGACTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGAACCA‑TCCCCGGCATGGCGAggtt > 2:409091/1‑249 (MQ=255) tCAGGGCGCGCAGCTCGACCACTTTTAAGCGCGACCAGCCTTCAATGCCCAGCGACTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATg > 1:648279/1‑251 (MQ=255) cgaccacTTTTAAGCGCGACCAGCCTTCAATGCCCAGCGACTGACACAACCTACTGTAGCGGGCGGTGATCTCGCGCCTCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGAATTTGTGAAAATCACAATGACGTCATCAGATTGCGGCAGGCCAATGGTG‑TTGTTGCGAAGTAAAAAGCA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATAGCTAGGATCAACGTGCCgatcctttcaacc > 2:124544/3‑239 (MQ=255) cgaccacTTTTAAGCGCGACCAGCCTTCAATGCCCAGCGACTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGc < 1:532623/249‑1 (MQ=255) gaccacTTTTAAGCGCGACCAGCCTTCAATGCCCAGCGACTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTCCTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACCATGCCGTCAGCAGATTGCGGCAGGCCGATGGTG‑TTGATGAGCAGGAAAAAGAA‑GCCGGTAGGCAGCACAA‑TCCCCGGCATGGCGAGGATACACGTGCCGCTCATCTccggcg > 2:30381/2‑247 (MQ=255) gcgcgACCAGCCTTCAATGCCCAGCGACTGACACAACATACGGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCa < 1:409091/247‑1 (MQ=255) cgcgACCAGCCTTTAATGCCCAGCGACTGACACAACATACTGTAGCGGGCGGTGATAGCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAg < 1:487243/248‑1 (MQ=255) aGCCTTCAATGCCCAGCGACTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTc > 1:701057/1‑251 (MQ=255) aGCCTTCAATGCCCAGCGACTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTc > 1:15299/1‑251 (MQ=255) ttCAATGCCCAGCGACTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGGG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACAAGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGcc > 2:675116/1‑251 (MQ=255) aatgcccAGCGACTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCcgcc > 1:180463/5‑250 (MQ=255) ccAGCGACTGACACAACATACTGTAGCGGGCGGTGATCTCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGCAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAACA‑GCCGGCAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCACATCTCAAGCGCCTGACCCGCCCGCATTTTCTGcccaccccc > 2:655913/1‑243 (MQ=255) gACTGACATAACATGCTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGCACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGTGGCAGGCCGATAGTG‑TTGTTGAg > 2:522224/1‑143 (MQ=255) gACTGACATAACATGCTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGCACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGTGGCAGGCCGATAGTG‑TTGTTGAg < 1:522224/143‑1 (MQ=255) gACTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTc > 1:628589/1‑251 (MQ=255) aCTGACACAACATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCACCTGACCCGCCAGCATTTTCTGCCGCCCCCGAAGTTcg > 2:322371/1‑251 (MQ=255) aaCATACTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCCGCAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCCTCTCCAGCCCCTGACCCCACAGCCTTTTCTGCCGCGccctaaattctcgactgcc > 2:142582/1‑235 (MQ=255) atacTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCCTCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGCCTGCTcc > 1:130781/4‑250 (MQ=255) tacTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATAAACCTGCCGCTCATCTCCAGCGCCTGACCCGCCAGCCTTTTCTGCCCCGCCCGAAGTTCGCGACTGCTccct > 2:71379/3‑249 (MQ=255) gTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGGTCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCACTGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGACCAA‑TCCCCGGCATGGCGAGGTTCAACATGCCGCTCATCTCAAGCGCCTGACCCGCCAGCATTTTCAGCCGCGCCCGAAGTTCGCGACGGCTACAtcac > 2:27616/1‑247 (MQ=255) gggcggTGATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGACCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGAAGATGGCGGCAGGCCAATGGTG‑TTGTTGAGCATAAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGcatc < 1:251620/251‑1 (MQ=255) gATATCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAAGGATAGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAAGGGTG‑TTGGTGAGCAGTAAAAAGAA‑GCCGGTCGCCAGGACAA‑TCCCCGGCATGGCGAGGATCAACATGCAGCTCATCTCCAGCGCCCGACCAGCCAGCATTTTCTACAGAGCCAGGAGTACGCGACGGCTCCATAGCAGAATCATGGTc > 2:368314/1‑250 (MQ=255) atCGCGCATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGc > 1:108139/1‑250 (MQ=255) gcgcATCGGGTTTTCCAGTACTTTCAGCGCCTAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCCCAATGCCGTCAGCAGATTGCGGCAGGCCAATGGGG‑TTGTTGAGCAGTAAAACGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGCGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCCTTTTCTGCCGCGCCCGCACTTCGCGCCCGCTCCCTAGCCGCCTCCTGGTCAGccac > 2:77243/1‑247 (MQ=255) cgcATCGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTAc > 1:168520/1‑251 (MQ=255) cGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGtg‑tt < 1:180645/96‑1 (MQ=255) cGGGTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGAGGCAGGCCAATGGtg‑tt > 2:180645/1‑96 (MQ=255) cGGGGTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGGG‑TTGTTGAGCAGAAAAAAGAA‑GCCGGGAGCCAGCACAA‑TCCCCGGCATGGCGGGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CCACGcac > 1:124368/1‑250 (MQ=255) gTTTTCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCCGCA‑CTACGCACAAt > 1:492711/1‑250 (MQ=255) tttCCAGTACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCCGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGATCCCTAGCAGCATCATGGTCAGCA‑CTACGCCCAATac > 1:710645/1‑250 (MQ=255) ttcccagttcttacggcgcATAAGGGATCGC‑ATATAACGTATGGGTAAAAATCACAGTGCCTGCAGCAGATGGCGGCAGCCCAATGGTG‑TTGTTGAGCATAAAAAAGAG‑GCCGGTAGCCAG‑ACAACTCCCCGGCATGGCGAGTATCAACATGCCTCCCCTCTCCAGCGCCTGCCCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATac < 2:560012/235‑1 (MQ=255) cagtaCTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCAGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCAGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTATGCCGCGCCCGAAGTTCGGGACTGCTCCATAGCAGCATCATGGACAGCA‑CTACGCACAATACACCtt > 2:498160/5‑250 (MQ=255) taCTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTgccc > 1:170675/2‑250 (MQ=255) cAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGCG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAgcc > 2:110044/1‑250 (MQ=255) cgaaTAAGGGATCCCCAT‑TACTCCATTGGTAAAAATCACAATGCCGCCAGCAGCTTGCGGC‑GGGCAATGGGGGTGGTTGAACAG‑AAAAAGAAAGCGGGTGCCCACCACAA‑CCCCCGGCATGGCGAGACCCAACATGCCGCTCATCTCCAGCGCTGGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CGACGCACAATACACCTGCCGCCAGCGCaa < 2:31981/248‑1 (MQ=255) gcATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGTTGCAGGCCGATAGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCCCAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCACCTGACCCGCCAGCATTTTCTGCCGCGCCCGCAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAAt > 1:315422/1‑251 (MQ=255) gcATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAAt > 1:150998/1‑251 (MQ=255) aTAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATAc > 1:534879/1‑251 (MQ=255) gATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATACGCAACg > 1:378357/1‑251 (MQ=255) gATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATACGCAACg > 1:361226/1‑251 (MQ=255) gATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATACGCAACg > 1:172415/1‑251 (MQ=255) aCGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATACGCAACGAGGTCCACAgc > 1:91573/1‑251 (MQ=255) gCATTGGTGAAAATAACTATGCCGTCAGCAGATTGCGGCAGGCCCATGGTG‑TTGTTGCGCAGTAAACAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCACTCATCTCCACCGCCTGACCCGCCAGCAATTTATGCCGCGCCCGCAGCTCGCGCATGCTCCCTAACCGCATCATGGTCACCAACAACAC‑CAACACCCCTGACGCCAGCGCCATCCCCAACGAGGCCcacacccc > 2:618329/1‑247 (MQ=255) aTTGGTGAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATACGCAACGAGGTCCACAGCGCCt > 1:78648/1‑251 (MQ=255) ggTGAAAATCACAATGCCGTCAGCAGATTGCGGGAGGCCAATGGTG‑TTGTAGAGCAGAAAAAAGAA‑GCGGGTAGCCAGCACAA‑CCCCCGGCAGGGCGGGGATCAACAGGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATACGCAACGAGGTCCACAGCGCCTGcc < 1:289090/251‑1 (MQ=255) gagAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGCAGTTCGCGACTGCTCCATAGCAGCATCCTGGGCAGCA‑CTACGCACAATACACCTCACGCCCGCGCCACACGCCACGCGGTCCACAgcccccgcc > 2:28280/3‑243 (MQ=255) gAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCCTAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATACGCACCGAGGGCCACAGCGCCTGCcacc > 2:18106/1‑250 (MQ=255) gAAAATCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTg > 1:292238/1‑209 (MQ=255) aaaaTCACAATGCCGTCAGCAGATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATACGCAACGAGGGCCAAAGCGCCTGCcac > 1:39739/1‑249 (MQ=255) gATTGCGGCAGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCACTACGCAACGAGGTCCACAGCGCCTGCCACAGCAACGGATGTGCCCGCACTTc > 2:555823/1‑251 (MQ=255) aGGCCAATGGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCGCCTGACCCGCCAGCATTTTCTGCCGCGCCCGAAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATCCACATGCCGCCAGCGCAATACGCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCAAcgg > 2:156659/1‑249 (MQ=255) | CGCCAAAATCACCAATCGACAGCACGCATGCAAAGGCCAGCGCCTGCGCCAGTGGACGTTTCAGGGCGCGCAGCTCCACCACTTTTAAGCGTGACCAGCCTTCAATCCCCAGCGACTGACATAACATGCTGTAGCGGGCGGTGATATCGCGCATCGGGTTTTCCAGCACTTTCAGCGCATAAGGGATCGCCAT‑TAACGCATTGGTGAAAATCACAATGCCGTCAGCAGATTGTGGCAGGCCGATAGTG‑TTGTTGAGCAGTAAAAAGAA‑GCCGGTAGCCAGCACAA‑TCCCCGGCATGGCGAGGATCAACATGCCGCTCATCTCCAGCACCTGACCCGCCAGCATTTTCTGCCGCGCCCGCAGTTCGCGACTGCTCCATAGCAGCATCATGGTCAGCA‑CTACGCACAATACACCTGCCGCCAGCGCAATACGCAACGAGGTCCACAGCGCCTGCCACAGCACCGGTTGTGCCAGCACTTCCGGCAACTG > NC_000913/73087‑73573 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |