Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 71,555 A→C M69L (ATG→CTG)  yabI → DedA family protein YabI

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_00091371,5550AC94.1% 94.2 / ‑4.9 34M69L (ATG→CTG) yabIDedA family protein YabI
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base C (9/23);  minor base G (1/1);  total (10/24)
Fisher's exact test for biased strand distribution p-value = 5.08e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

TTGACAGGCACATTATGCAAGCATTGCTGGAACACTTTATTACCCAATCCACCGTGTATTCATTGATGGCGGTGGTGTTGGTGGCCTTTCTGGAGTCGCTGGCGCTGGTCGGTTTGATTCTACCCGGTACGGTGCTGATGGCGGGGCTGGGAGCGCTGATTGGCAGCGGCGAGTTAAGTTTCTGGCACGCCTGGCTGGCAGGGATTATTGGCTGCTTGATGGGCGACTGGATTTCTTTCTGGCTGGGTTGGCGTTTTAAAAAGCCGTTGCATCGCTGGTCATTTCTGAAGAAAAACAAAGCACTACTTGATAAAACTGAACATGCGTTGCATCAACACAGCATGTTCACCATTCTGGTCGGTCGTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGCTGGATCTGCCGGTGGCTAAATTT  >  NC_000913/71337‑71770
                                                                                                                                                                                                                          |                                                                                                                                                                                                                          
ttGACAGGCACATTATGCAAGCATTGCTGGAACACTTTATTACCCAATCTACCGTGTATTCATTGATGGCGGTGGTGTTGGTGGCCTTTCTGGAGTCGCTGGCGCTGGTCGGTTTGATTCTACCCGGTACGGTGCTGATGGCGGGGCTGGGAGCGCTGATTGGCAGCGGCGAGTTAAGTTTCTGGCACGCCTGGCTGGCAGGGATTGTCGGTTGTCTGCTGGGCGACTGGATCTCCTTCTGGCTgggctg                                                                                                                                                                                            <  1:37213/250‑4 (MQ=255)
   aCAGGCACATTATGCAAGCATTGCTGGAACACTTTATTACCCAATCTACCGTGTATTCATTGATGGCGGTGGTGTTGGTGGCCTTTCTGGAGTCGCTGGCGCTGGTCGGTTTGATTCTACCCGGTACGGTGCTGATGGCGGGGCTGGGAGCGCTGATTGGCAGCGGCGAGTTAAGTTTCTGGCACGCCTGGCTGGCAGGGATTGTCGGTTGTCTGCTGGGCGACTGGATCTCCTTCTGGCTGGGCTGGCGt                                                                                                                                                                                        <  1:626357/251‑1 (MQ=255)
                  aaGCATTGCTGGAACACTTTATTACCCAATCTACCGTGTATTCATTGATGGCGGTGGTGTTGGTGGCCTTTCTGGAGTCGCTGGCGCTGGTCGGTTTGATTCTACCCGGTACGGTGCTGATGGCGGGGCTGGGAGCGCTGATTGGCAGCGGCGAGTTAAGTTTCTGGCACGCCTGGCTGGCAGGGATTGTCGGTTGTCTGCTGGGCGACTGGATCTCCTTCTGGCTGGGCTGGCGTTTTAAAAAGCCGTTg                                                                                                                                                                        <  1:701454/251‑1 (MQ=255)
                        tGCTGGAACACTTTATTACCCAGTCTACCGTGTATTCATTGATGGCGGTGGTTTTGGTGGCCTTTCTGGAGTCGCTGTCGCTGGTCGGTTTGATTCTACCCGGTACTGTGCTGATGGCGGGGCTGGGAGCGCTGATTGGCGGCGGCGAGTTAATTTTCTGGCACGCCTGGCTGGCAGGGATTGTCGGTTATCTGCTGGTCGACTGGATCTCCTTCTGGCTGGGCTGGCGTTTTAAAAAGCCGTTGCATCg                                                                                                                                                                   <  1:108024/250‑1 (MQ=255)
                             gAACACTTTATTACCCAATCTACCGTGTATTCATTGATGGCGGTGGTGTTGGTGGCCTTTCTGGAGTCGCTGGCGCTGGTCGGTTTGATTCTACCCGGTACGGTGCTGATGGCGGGGCTGGGAGCGCTGATTGGCAGCGGCGAGTTAAGTTTCTGGCACGCCTGGCTGGCAGGGATTGTCGGTTGTCTGCTGGGCGACTGGATCTCCTTCTGGCTGGGCTGGCGTTTTAAAAAGCCGTTGCATCGCTGGTc                                                                                                                                                             <  1:603236/251‑1 (MQ=255)
                                    ttattaCCCAATCTACCGTGTATTCATTGATGGCGGTGGTGTTGGTGGCCTTTCTGGAGTCGCTGGCGCTGGTCGGTTTGATTCTACCCGGTACGGTGCTGATGGCGGGGCTGGGAGCGCTGATTTGCAGCGGCGAGGTAAGTTTTTGGCACGCCTGGCTGGCCGGGGTTGTCGGGTGTCTGCTGGGCGGCAGGGTCTCCTTCTTGCTGGGCTGGCGGTTTTAAAAGCCCTTGCATCGCTGGTCCTTTCtt                                                                                                                                                      >  1:340538/1‑250 (MQ=255)
                                        tcaccaatcttccGTGTATTCATTGATGGCGGGGGTGTTGGTGGCCTTTCTGGAGTCGCTGGCGCTGGGCGGTTTGATTCTACCCGGTACGGTGCTGATGGCGGGGCTGGGAGCGCTGATTGGCAGCGGCGAGTTAAGTTTCTGGCACGCCTGGCTGGCAGGGATTGTCGGTTGTCTGCTGGGCGACTGGATCTCCTTCTGGCTGGGCTGGCGTTTTAAAAAGCCGTTGCATCGCTGGTCATTTCTgaag                                                                                                                                                  <  2:2508/239‑1 (MQ=255)
                                           ccAATCTACCGTGTATTCATTGATGGCGGTGGTGTTGGTGGCCTTTCTGGAGTCGCTGGCGCTGGTCGGTTTGATTCTACCCGGTACGGTGCTGATGGCGGGGCTGGGAGCGCTGATTGGCAGCGGCGAGTTAAGTTTCTGGCACGCCTGGCTGGCAGGGATTGTCGGTTGTCTGCTGGGCGACTGGATCTCCTTCTGGCTGGGCTGGCGTTTTAAAAAGCCGTTGCATCGCTGGTCATTTCTGAAGaaaa                                                                                                                                              <  1:498181/251‑1 (MQ=255)
                                                   gtgtggtttCATTGAGGGCGGGGGGTTTGGAGTCCTTTCTTGAGGTGCTGGTGGTGGTGGGTTTGATTCTGCCCGGGATGGTGCTGATGTTGGGGCCGGGTGCGCTGATTGGCAGCGGCGAGTTAAGTTTCTTGCACGCCTGGCTTGCGGGGATTGGCGGTTGGTTGCTGGGCGCCTCGATCTCTTTCTGGCTGTGAAGGCGTTTTAAAAAGCCGGTGCATCGCTGGTCATTACTGAAAAAAAACTAAGc                                                                                                                                       <  2:24723/243‑1 (MQ=255)
                                                       gtATTTATTGATGTCGGTGGTGTTGGTGGCCTTTCTGGAGTCGCTGGCGCTGGTCGGTTTGATTCTACCCGGTACGGTGCTGATGGCTGGGCTGGGAGCGCTGATTGGCAGCGGCGAGTTAAGTTTCTGGCACGCCTGGCTGGTAGGGATTGTCGGTTGTCTGCTGGGCGTCTGGATCTCCTTTTGGCTGGGCTGGCGTTTTAAAAAGCCGTTGCATCGCTGGTCATTTCTGAAGAAAAACAAAGCattac                                                                                                                                  <  1:82098/251‑1 (MQ=255)
                                                         aTTCATTGATGGCGGTGGGGTTGGTGGCCTTTCGGGAGTCGTGGGCGCTGGTCGGTTTGATTCTGCCCGGTACGGTGCTGATGGCGGGGCTGGGAGCGCTGATTGGCAGCTGCGAGTTAAGTTTCTGGCACGCCTGGCTGGCAGGGATTGTCGGTTGTCTGCTGGGCGACTGGATCTCCTTCTGGCTGGGCTGGCGTTTTAAAAAGCCGTTGCATCGCTGGTCATTTCTGAAGAAAAACAAAGCattactc                                                                                                                                <  2:4773/251‑2 (MQ=255)
                                                             aTTGATGGCGGTGGTGTTGGTGGCCTTTCTGGAGTCGCTGGCTCTGGTCGGTTTGATTCTACCCGGTACGGTGCTGATGGCGGGGCTGGGAGCGCTGATTGGCAGCGGCGAGTTAAGTTTCTGGCACGCCTGGCTGGCAGGGATTGTCGGTTGTCTGCTGGGCGACTGGATCTCCTTCTGGCTGGGCTGGCGTTTTAAAAAGCCGTTGCATCGCTGGTCATTTCTGAAGAAAAACAAAGCATTACTCGATa                                                                                                                            <  1:375760/251‑1 (MQ=255)
                                                             aTTGATGGCGGTGGTGTTGGTGGCCTTTCTGGAGTCGCTGGCGCTGGTCGGTTTGATTCTACCCGGTACGGTGCTGATGGCGGGGCTGGGAGCGCTGGTTGGCAGCGGCGAGTTAAGTTTCTGGCAAGCCTGGCTGGCAGGGGTTTTCGGGTGTCTGCTGGGGGACTGGGTCTCCTTTTGGCGGGGCTGGCGTTTTTAAAAAACCGTTCATCCCTGGGCCTTTTTGAAGAAAAACaaaaaattaatcgat                                                                                                                             >  1:289168/1‑238 (MQ=255)
                                                               ggATGGCGGTGGTGTTGGTGGCCTTTCTGGAGTCGCTGGCGCTGGTCGGTTTGATTCTACCCGGTACGGTGCTGATGGCGGGGCTGGGAGCGCTGATTGGCAGCGGCGAGTTAAGTTTCTGGCACGCCTGGCTGGCAGGGATTGTCGGTTGTCTGCTGGGCGACTGGATCTCCTTCTTGCTGGGCTGGCGTTTTAAAAAGCCGTTGCATCGCTGGTCATTTCTGAATAAAAACAAAGCATTACTCGATaaa                                                                                                                          <  1:465011/250‑1 (MQ=255)
                                                                     cGGTGGTGTTGGTGGCCTTTCTGGAGGCGCTGGCGCTGGTCGGTTTGATTCTACCCGGTACGGTGCTGATGGCGGGGCTGGGAGCGCTGATTGGCAGCGGCGAGTTAAGTTTCTGGCACGCCTGGCTGGCAGGGATTGTCGGTTGTCTGCTGGGCGACTGGATCTCCTTCTGGCTGGGCTGGCGTTTTAAAAAGCCGTTGCATCGCTGGTCATTTCTGAAGAAAAACAAAGCATTACTCGATAAAACTGaa                                                                                                                    <  1:692147/251‑1 (MQ=255)
                                                                                gtggCCTTTCTGGAGTCGCTGGCGCTGGTCGGTTTGATTCTACCCGGTACGGTGCTGATGGCGGGGCTGGGAGCGCTGATTGGCAGCGGCGAGTTAAGTTTCTGGCACGCCTGGCTGGCAGGGATTGTCGGTTGTCTGCTGGGCGACTGGATCTCCTTCTGGCTGGGCTGGCGTTTTAAAAAGCCGTTGCATCGCTGGTCATTTCTGAAGAAAAACAAAGCATTACTCGATAAAACTGAACATGCGTTGCa                                                                                                         <  1:132109/251‑1 (MQ=255)
                                                                                          tGGAGTCGCTGGCGCTGGTCGGTTTGATTCTACCCGGTACGGTGCTGATGGCGGGGCTGGGAGCGCTGATTGGCAGCGGCGAGTTAAGTTTCTGGCACGCCTGGCTGGCAGGGGTTGTCGGTTGTCTGCTGGGCGGCTGGGTCTCCTTCTGGCTGGGCTGGCGTTTTTAAAAGCCGGTGCATCGCTGGTCATTTCTGAAGAAAAAAAAAGCATTACTCGATAAAACTGAACATGCCGTGCATCAACACAGc                                                                                               >  1:427604/1‑251 (MQ=255)
                                                                                          tGGAGTCGCTGGCGCTGGCCGGTTTGATTCTCCCCGGTACGGTGCTGATGGCGGGGCTGGGAGCGCTGTTTGGCAGCGGCGGGTTAAGTTTCTGGCACGCCTGGCTGGCGGGGATTGTCGGTTGTCTGCTGGGGGACTGGATTTCCTTCTGGCGGGGCTGGCGTTTTAAAAAGCCGTTGCATCGCTGGTCATTTCTGAAGAAAAACAAAGCATTACTCGATAAAACTGAACATGCGTTGCTTCAaccacgc                                                                                               >  1:686860/1‑246 (MQ=255)
                                                                                            gAGTCGCTGGCGCTGGTCGGTTTGATTCTACACGGTACGGTGCCGATGGCGGGGATGGGGACGCTTATTGGCAGCGGCGAGGTAAGGTTTTGGCACGCCTGGCTGGCAGGGATTGTCGGGTGTCTGGTGGGCGGACGGATCTACTTCTGGCTGGGCTGGAGTTTTAAAAAACCGTTGGATCGCTTGGCATTTCTGCAGGAAAAACAAGAATTTCTCGATAAAACTGCACAAGCGATGCATCaaaccaacat                                                                                             >  1:629131/1‑243 (MQ=255)
                                                                                             ggTCGCTGGCGCTGGTCGGTTTGATGCTACCCGGTACGGTGCTGATGGCGGGGCTGGGGGCGCTGATGGGCAGCGGCGAGTTAAGTTTCTGGCACGCCTGGCTGGCAGGGATTGTCGGTTGTCTGCTGGGCGACTGGATCTCCTTCTGGCTGGGCTGGCGTTTTAAAAAGCCGTTGCATCGCTGGTCATTTCTGAAGAAAAACAAAGCATTACTCGATAAAACTGAACATGCGTTGCATCAACACAGCATg                                                                                            <  1:434101/250‑1 (MQ=255)
                                                                                                cgctggcgctggTCGGTTTGATTCTGCCCGGGACGGTGCTGATGGCGGGGCTGGGAGCGCTGATTGGCAGCGGCGAGTTAAGTTTCTGGCACGCCTGGCTGGCAGGGATTGTCGGTTGTCTGCTGGGCGACTGGATCTCCTTCTGGCTGGGCTGGCGTTTTAAAAAGCCGTTGCATCGCTGGTCATTTCTGAAGAAAAACAAAGCATTACTCGATAAATCTGAACATGCGTTGCATCAACACAGCATGtt                                                                                          <  1:530345/250‑1 (MQ=255)
                                                                                                  ctggcgctggTCGGTTTGATTCTACCCGGTACGGTGCTGATGGCGGGGCTGGGAGCGCTGATTGGCAGCGGCGAGTTAAGTTTCTGGCACGCCTGGCTGGGAGGGATTGTCGGGTGGCTGCTGGGCGACTGGATCTCCTTCTGGCTGGGGTGGCGTTTTAAAAAGCCGTTGCATCGCTGGTCATTTCTGAAGAAAAAAAAAGCATTAATCGATAAAACTGAACATGCGTTGCATCAACACAGCATGTTCAc                                                                                       >  1:126273/1‑251 (MQ=255)
                                                                                                           gTCGGTTTGATTCTACCCGGGACGGTGCTGATGGCGGGGCTGGGAGCGCTGATTGGCAGCGGCGAGGTAAGTTTCTGGCACGCCTGGCTGGCAGGGATTGTCGGTTGTCTGCTGGGCGACTGGATCTCCTTCTGGCTGGGCTGGCGTTTTAAAAAGCCGTTGCATCGCTGGTCATTTCTGAAGAAAAACAAAGCATTACGCGATAAAACGGAACATGCGTTGCATCAACACAGCATGTTCACCAGTCTggg                                                                              <  2:261483/251‑2 (MQ=255)
                                                                                                                tttGATTCTACCCGGTACGGTGCTGATGGCGGGGCTGGGAGCGCTGATTGGCAGCGGCGAGTTAAGGTTCTGGCACGCCTGGCTGGCAGGGGTTGTCGGTTGTCTGCTGGGCGACTGGATCTCCTTTTGGCTGGGCTGGCGTTTTTAAAAGCCGTTGCCTCGCTGGTCATTTCTGGAGAAAAACAAAGCATTACTCGGTAAAAATGAAAATACGTTGCATCAACACAGCAAGTTCCCCCTTCTggtcggtc                                                                         >  1:104046/1‑251 (MQ=255)
                                                                                                                  tGATTCTTCCCGGTACGGTGCTGATGGGGGGGCTGGGGGCGCTGATTGGCAGCGGCGAGTTAAGTTTCGGGCACGCCTGGCTGGCAGGGATTGTCGGTTGTCTGCTGGGCGACTGGATCTCCTTCTGGCTGGGCTGGCGTTTTAAAAAGCCGTTGCATCGCTGGTCATTTCTGAAGAAAAACAAAGCATTACTCGATAAAACTGAACATGCGTTGCATCAACACAGCATGTGCACCATTCTGgtcggtcg                                                                        <  2:384902/250‑1 (MQ=255)
                                                                                                                                     gCTGATGGCGGGGCTGGGAGCGCTGATTGGCAGCGGCGAGTTAAGTTTCTGGCACGCCTGGCTGGCAGGGATTGTCGGTTGTCTGCTGGGCGACTGGATCTCCTTCTGGCTGGGCTGGCGTTTTAAAAAGCCGTTGCATCGCTGGt                                                                                                                                                              <  1:322288/146‑1 (MQ=255)
                                                                                                                                             gggggCTGGGAGCGCTTGTTGGCTGCGGCGAGTTAAGTTTCTGGGACGCCTGGCTGGCAGGGATTGTCGGTTGTCTGCTGGGCGACTGGATCTCCTGCTGGCTGGGCTGGCGTTTTAAAAAGCCGTTGCATCGCTGGTCATTTCTGAAGAAAAACAAAGCATTACTCGATAAAACTGAACATGCGTTGCATCAACACAGCATGTTCACCATTCTGGTCGGTCGCTTTGTTGGCCCGACGCGTCCGCTGGTg                                            <  2:289168/250‑1 (MQ=255)
                                                                                                                                             cGGGGCTGGGAGCGCTGATTGGCAGCGGCGAGTTAAGTTTCTGGCACGCCTGGCTGGCAGGGATTGTCGGTTGTCTGCTGGGCGACTGGATCTCCTTCTGGCTGGGCTGGCGTTTTAAAAAGCCGTTGCATCGCTGGTCATTTCTGAAGAAAAACAAAGCATTACTCGATAAAACTGAACATGCGTTGCATCAACACAGCATGTTCACCATTCTGGTCGGTCGCTTTGTTGGCCCGACGCGTCCGCTGGTg                                            <  1:392368/251‑1 (MQ=255)
                                                                                                                                                                tGGCAGCGGCGAGATAAGTTTCTGGCACGCATGGCTGGCAGGGATTGTCGGTTGTCTGCTGGGGGACTGGATCTCCTTCTGGCTGGGCTGGCGTTTTAAAAAGCCGTTGTATCGCTGGTCATTTCTGAAGAAAAACAAAGCATTACTCGATAAAACTGAACATGCGTTGCATCAACACAGCATGTTCACCATACTTGGCGGGCGCTTTGGTGGCCCGACGCGACCGCTGGTGCCAATGGGGGCGGGGATgg                         >  1:483648/1‑250 (MQ=255)
                                                                                                                                                                    aGCGGCGAGTTAAGTTTCTGGCACGCCTGGCTGGCAGGGATTGTCGGTTGTCTGCTGGGCGACTGGATCTCCTTCTGGCTGGGCTGGCGTTTTAAAAAGCCGTTGCATCGCTGGTCATTTCTGAAGAAAAACAAAGCATTACTCGATAAAACTGAACATGCGTTGCATCAACACAGCATGTTCACCATTc                                                                                  >  1:403397/1‑190 (MQ=255)
                                                                                                                                                                    aGCGGCGAGTTAAGTTTCTGGCACGCCTGGCTGGCAGGGATTGTCGGTTGTCTGCTGGGCGACTGGATCTCCTTCTGGCTGGGCTGGCGTTTTAAAAAGCCGTTGCATCGCTGGTCATTTCTGAAGAAAAACAAAGCATTACTCGATAAAACTGAACATGCGTTGCATCAACACAGCATGTTCACCATTc                                                                                  <  2:403397/190‑1 (MQ=255)
                                                                                                                                                                       ggcgAGTTAAGTTGCGGGCACGCCTGGCTGGCAGGGATTGTCGGTTGTCTGGTGGGCGACTGGATCTCCTTCTGGCTGGGCTGGCGTTTTAAAAAGCCGTTGCATCGCTGGTCATTTCTGAAGAAAAACAAAGCATTACTCGATAAAACTGAACATGCGTTGCATCAACACAGCATGTTCACCATTCTGGTCGGTCGCTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGCTGGATCt                  <  2:340538/251‑1 (MQ=255)
                                                                                                                                                                                       ggCACGCCTGGCTGGCAGGGATTGTCGGTTGTCTGCTGGGCGACTGGATCTCCTTCTGGCTGGGCTGGCGTTTTAAAAAGCCGTTGCATCGCTGGTCATTTCTGAAGAAAAACAAAGCATTACTCGATAAAACTGAACATGCGTTGCATCAACACAGCATGTTCACCATTCTGGTCGGTCGCTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGCTGGATCTGCCGGTGGCAAAAttc  <  2:126273/251‑2 (MQ=255)
                                                                                                                                                                                        gCACGCCTGGCTGGCAGGGATTGTCGGTTGTCTGCTAGGCGACTGGATCTCCTTCTGGCTGGGCTGGCGTTTTAAAAAGCCGTTGCATCGCTGGTCATTTCTGAAGAAAAACAAAGCATTACTCGATAAAACTGAACATGCGTTGCATCAACACAGCATGTTCACCATTCTGGTCGGTCGCTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGCTGGATCTGCCGGTGGCAAAAttc  >  1:267865/1‑249 (MQ=255)
                                                                                                                                                                                                                          |                                                                                                                                                                                                                          
TTGACAGGCACATTATGCAAGCATTGCTGGAACACTTTATTACCCAATCCACCGTGTATTCATTGATGGCGGTGGTGTTGGTGGCCTTTCTGGAGTCGCTGGCGCTGGTCGGTTTGATTCTACCCGGTACGGTGCTGATGGCGGGGCTGGGAGCGCTGATTGGCAGCGGCGAGTTAAGTTTCTGGCACGCCTGGCTGGCAGGGATTATTGGCTGCTTGATGGGCGACTGGATTTCTTTCTGGCTGGGTTGGCGTTTTAAAAAGCCGTTGCATCGCTGGTCATTTCTGAAGAAAAACAAAGCACTACTTGATAAAACTGAACATGCGTTGCATCAACACAGCATGTTCACCATTCTGGTCGGTCGTTTTGTTGGCCCGACGCGTCCGCTGGTGCCAATGGTGGCGGGAATGCTGGATCTGCCGGTGGCTAAATTT  >  NC_000913/71337‑71770

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: