| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,135,775 | 0 | C | T | 23.5% | 92.0 / 11.9 | 51 | K199K (AAG→AAA) | pitB | metal phosphate:H(+) symporter PitB |
| Reads supporting (aligned to +/- strand): ref base C (11/28); new base T (12/0); total (23/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.52e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGTCCCGCTCCAGTAGCGTCG‑CAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAA‑CAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTGCGAACTGGAGGCCGGT > NC_000913/3135530‑3136024 | ggCAGTTCAGGATGCTGGTGCAGGTAGTGTTCGAAGTTGGTAAAGGAATCGCGGTTACGGATAAATTCATAGCCGGACGCATTCTGATTGACGACGAATCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCTCAATACGCGTCCAGAATGGCGGTTTACG‑T‑TTGC‑CTTTTTTCttttt < 2:239440/251‑1 (MQ=255) aGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGTTGGTAACGGCACCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGTCGACGAAGCCAGCAGGGGCAACCCCCACCAGTACCAGCATTACCAGTCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCTCAATACGCGTCCAGAATGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCg < 1:390523/251‑1 (MQ=255) aGGATGCTGTTGCAGGTAGTGTTCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCtt < 1:404118/251‑1 (MQ=255) ggATGCTGTTGCAGGTAGTGTTCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGGTTATG‑T‑TTGC‑CCTttttttttttttgggcttt > 2:557681/1‑242 (MQ=255) gCTGTTGCAGGTAGTGTGCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGGCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCATCCgg < 1:152346/250‑1 (MQ=255) gCTGTTGCAGGTAGAGTTCAAAGTTGGTAACGGCATCGCGGGTGCGGGTACTTTCATAGCCGGACGGATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGCCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAACCAATCAGCGCAATACGCGTCCAGAATGGCGGATTTTG‑TATTGCTCTTTTTTTTTTTTGcttcttctgg > 2:103599/1‑242 (MQ=255) gCTGTGGCATGTAGTGTTCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTTCGATCTTCCGGa < 2:36162/251‑1 (MQ=255) ggTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTTAG‑T‑TTGC‑CCTTTTTCTTTTTTCGGTCTTCCGGAATGCGGGGGATA‑AGG‑TCCCGCtttt > 1:110341/1‑251 (MQ=255) aaCGGCATCCCGGGGACGGGTAATTTCATAGCCGACCGAATTCATATTGACGACGAAGCCAGCAGGGTCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTc < 2:523792/250‑1 (MQ=255) ggCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGATTTCG‑T‑TTTG‑CTTTTTTTTTTTTTTGCTCTTTCTGAGTGCGGTGAATT‑CGG‑GTACGCtttttttctc > 2:247637/1‑246 (MQ=255) cgcgGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGTCCCGCt < 1:588527/250‑1 (MQ=255) acgggtaATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCATCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGTCCCGCTCCAGTAGc < 2:306965/251‑1 (MQ=255) gtaATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGTCCCGCTCCAGTAGCGTCg < 1:131997/251‑1 (MQ=255) tCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTATG‑T‑TTTC‑CTTTTTTTTTTTTTCGAGCTTTCGGAATGCGGTGAATA‑AGG‑TCACGCTTTTTCGTCCCGCTCCCGAAGCGTCg‑ccgc > 1:191188/1‑246 (MQ=255) ggACGCATTCATATTGACGACGAAGCCAGCAGGGGCAAGCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCTTCCgg < 2:636392/189‑1 (MQ=255) aTTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTATG‑T‑TTTC‑CTTTTTTTTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TGACGCTTTTTTGTCCCCCTCCCGTAGCGTCG‑CAGCCGGAATATCAGGCCTc > 1:382111/1‑251 (MQ=255) aTTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAAG‑G‑TTGC‑CTTTTTTTTTTTTTCGATCTTCCGGAATGCGGGGGATA‑CGG‑TCACGCTTTTTTGTCCCGCTCCAGTAGCGGCG‑CAGCAGGAATATCAGGCCTc > 1:329592/1‑251 (MQ=255) aatatTGACGACGAAGCCAGACGGGGCAATCCCTCCCAGTCCTAGCATTACCAGGCCGATCCCGTTTTGTCCGTCGTTCGCGCCGGGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTGTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTGCGTCCCGCTCCAGTAGCGTCG‑CAGCAGGTATATCAGGCCTCCCg < 2:416305/250‑1 (MQ=255) atTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACA‑G‑TTGC‑CTTTTTTTTTTTTTTGTTCTTCCGGAATACGGGGGATA‑CGGGCCAC‑CTTTTTCGTCCCCCTCCAGGAGCGGCG‑CAGCAGGGATATCAgacatcccccc > 1:233949/1‑240 (MQ=255) ggggCAACCCCCCCCAGTACCAGCATTACCAGGCCGAGCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGTCCCGCTCCAGTAGCGTCG‑CAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAgg < 2:329042/251‑1 (MQ=255) cAATCCCCACCAGTACCAGCATTACCAGGCCGACCCCTGTTTGGCCGTCGTTCGCGCCGTGCGAAAACGCCACGGCCGCAGCGGAAACAATCAGCGCAATTCGCGGCCATAATGGCGGTTTCCG‑T‑TTGC‑TGTTTTTCTTTTTGCGAGCTTCCGGAATGCGGTGAATA‑CGG‑TCCCGCTTTTTCGTCCCGCTCCAGTAGCGGCG‑CAGCAGGAATATCAGGCCTCTCGCAATGACCAGGCCGACGATAGGGGaa < 1:357036/251‑1 (MQ=255) gTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTTAG‑T‑TTGC‑CTTTTTTCTTTTTGCGCTCTTTCGGGATGCGGTGGATA‑CGG‑TTACGCTTTTTTGTCCCCCCACAGTCGCGTCG‑CAGCAGGAATATCTGGGCCCCCCCAATTACCCAGCCGACGATAGGGGGAA‑Caaaaaaag > 2:452531/1‑243 (MQ=255) tACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACGGT‑TTGC‑‑TTTTTTTTTTTTGCGATCTTCCTGAATGAGGGGAATA‑CGG‑TCACGCTTTTTTGTCCCCCTCCCCGAGCGTCG‑CAGCAGGGAAATCAAGGCTCCCCCAAAGACCCGGCCGACGATAGGGGAAAACAA‑CAGCgagg > 1:428004/1‑251 (MQ=255) tACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑T‑TTTG‑CTTTTTTTTTTTTTTGGTCTTTCGGGATGCGGGGAATA‑CGG‑TCAATCTTTTTCGTCCCGCCCCCGTAGCGTCG‑CCGCAGGGATAATAGGCCGCCCGCCATGACCAGGCCGACCGCAGGGGAAA‑AAAACAGCgagg > 1:279067/1‑251 (MQ=255) cAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTTCG‑T‑TTGC‑CTTTTTTTTTTTTTCGATCTTCCGGGATGCGGTGGATA‑CGG‑TCACGCTTTTTCGTCCCGCCCCCGTAGCGTCG‑CAGCAGGGATATCAGGCCCCCCGCCATGACCCGGCCGACGATAGGGGAAA‑CAATCAGCGAGGAGAAAATTTTgg > 1:118958/1‑251 (MQ=255) aGGCCTATCCCTTTTTGGCCGCCTTCCGCGCCTTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGTCCCGCTCCAGTAGCGTCG‑CAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAA‑CAATCAGCGAGGAGAAAATTTTGGt < 2:118958/251‑1 (MQ=255) cTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACA‑T‑TTTC‑CCTTTTTCTTTTTTAGATCTTCCGGAAAGCGGTGAAAAACGG‑‑CACGCTTTTTTGTCCCCCTCCAGTAGCGTCGGCGGCAG‑AATATCAGGACCCCCCCAATGACCACGCCGACGCCACGGGGAA‑CAAAAAACGAGGAGAAAATTTTTGTccactcacgc > 1:316804/1‑242 (MQ=255) ttttGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGTCCCGCTCCAGTAGCGTCG‑CAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAA‑CAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCa < 1:233536/250‑1 (MQ=255) tttGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑G‑TTTC‑CTTTTTTTTTTTTGCGGTCTTCCGGAATGCGGTGGATA‑CGG‑TCACGCTTTTTCGTCCCCCCCCAGGAGCGTCG‑CAGCAGGAATATCAGGCCTCCCGCCAAGACCCGGCCGGCGATTGGGGGAA‑CAAACAGCGAGGGGAAAAATTTTGTCGCTTCACGCAgg > 1:620486/1‑251 (MQ=255) ttGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑T‑TTGC‑CTTTTTTTTTTTTTTGATCTTCCGGGATGCGGTGGATa > 2:255574/1‑127 (MQ=255) ttGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATa < 1:255574/127‑1 (MQ=255) tGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGTCCCGCTCCAGTAGCGTCG‑CAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAA‑CAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGt < 1:554203/250‑1 (MQ=255) cGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGTCCCGCTCCAGTAGCGTCG‑CAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAA‑CAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATg < 2:329592/251‑1 (MQ=255) aaaaCGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGTCCCGCTCCAGTAGCGTCG‑CAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAA‑CAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGAt < 1:165479/248‑1 (MQ=255) acgccacgccCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTAAG‑T‑TTGC‑CTTTTTTTTTTTTTCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGTCCCGCTCCAGTAGCGTCG‑CCGCAGGAAAATTAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAA‑CAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGATTAAAGCATCCATCACCggtggaccg > 1:44031/1‑243 (MQ=255) cacgccCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGTCCCGCTCCAGTAGCGTCG‑CAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAA‑CAATCAGCGAGGAGAAAATTTTg < 2:596083/205‑1 (MQ=255) cAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTTCGATCTTCCGGAATGCGGGGGATA‑AGG‑TCACGCTTTTTCGTCCCGCTCCAGTAGCGTCG‑CAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGCTAGGGGGAA‑CAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTTACGCATCCATCACCGAAGAGCCCGGTAACACcgcg > 1:408853/1‑251 (MQ=255) ggAAACAATCAGCGCAATACGCGTCCAGAAAGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGCCCCGCTCCAGTAGCGTCG‑CAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAA‑CAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTgg < 2:335513/251‑1 (MQ=255) cAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGTCCCGCTCCAGTAGCGTCG‑CAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAA‑CAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTaaa < 2:620486/251‑1 (MQ=255) cAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGTCCCGCTCCAGTAGCGTCG‑CAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAA‑CAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGa < 1:247637/251‑1 (MQ=255) cgcAATACGCGTCCAGAATGGCGGTTTTCG‑T‑TTTC‑CTTTTTTCTTTTTGCGCTCTTCCGGAATGCGGGGGATA‑CGG‑TCACGCTTTTTTGTCCCGCTCCAGTAGCGTCG‑CAGCAGGAATATCAGGGCTCCCGCCATGAACAGGCCGACGATAGGGGGAA‑CAATCAGCGGGGAGGAAAATTTGGGCACTTCACGCAGGTTTAACGCATCCCTCTACGATGAGCCGGTTAACAGCGCGTTGGGTAAACCCATGc > 1:462639/1‑251 (MQ=255) gcgTCCAGAAGGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGTCCCGCTCCAGTAGCGTCG‑CAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAA‑CAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATc < 1:103599/251‑1 (MQ=255) aGAATGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTGCGTCCCGCGCCAGTAGCGTCG‑CAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAA‑CAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCa < 2:408853/251‑1 (MQ=255) tGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGTCCCGCTCCAGTAGCGTCG‑CAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAA‑CAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCg > 1:121069/1‑197 (MQ=255) tGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGTCCCGCTCCAGTAGCGTCG‑CAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAA‑CAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGGTTAACGCATCCATCACCg < 2:121069/197‑1 (MQ=255) ggCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGTCCCGCTCCAGTAGCGTCG‑CAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAA‑CAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCa > 1:142868/1‑250 (MQ=255) gCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGTCCCGCTCCAGTAGCGTCG‑CAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAA‑CAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAg < 1:452531/251‑1 (MQ=255) ggTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGTCCCGCTCCAGTAGCGTCG‑CAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAA‑CAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGgt > 1:515063/1‑251 (MQ=255) cG‑T‑TTGC‑CTTTTTTCTTTTGGCGATCTACCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGTCCCGCTCCAGTAGCGTCG‑CAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAA‑CAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTGCg < 1:176938/250‑1 (MQ=255) t‑ttGC‑CTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGTCCCGCTCCAGTAGCGTCG‑CAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAA‑CAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTGCGAAc > 1:351703/1‑251 (MQ=255) c‑cTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGTCCCGCTCCAGTAGCGTCG‑CAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAA‑CAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTGCGAACTgg > 1:67330/1‑250 (MQ=255) tttttCTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGTCCCGCTCCAGTAGCGTCG‑CAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAA‑CAATCAGCGAGGAGAACATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATTAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTGCGAACCGGAGGc > 1:555938/1‑251 (MQ=255) cTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGTCCCGCTCCAGTAGCGTCG‑CAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAA‑CAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGAAGAGCCGGTTAACAGCGCGTTGGTTAAACCGCTGCCGATAATCGCACCAATCAAGGTGTGCGAACTGGAGGCCGGt > 2:589771/1‑250 (MQ=255) | GGCAGTTCAGGATGCTGTTGCAGGTAGTGTTCGAAGTTGGTAACGGCATCGCGGGTACGGGTAATTTCATAGCCGGACGCATTCATATTGACGACGAAGCCAGCAGGGGCAATCCCCACCAGTACCAGCATTACCAGGCCGATCCCTTTTTGTCCGTCGTTCGCGCCGTGCGAAAACGCCACGCCCGCAGCGGAAACAATCAGCGCAATACGCGTCCAGAATGGCGGTTTACG‑T‑TTGC‑CTTTTTTCTTTTTGCGATCTTCCGGAATGCGGTGAATA‑CGG‑TCACGCTTTTTCGTCCCGCTCCAGTAGCGTCG‑CAGCAGGAATATCAGGCCTCCCGCAATGACCAGGCCGACGATAGGGGAAA‑CAATCAGCGAGGAGAAAATTTTGGTCACTTCACGCAGGTTTAACGCATCCATCACCGATGAGCCGGTTAACAGCGCGTTGGTTAAACCGATGCCGATAATCGCACCAATCAAGGTGTGCGAACTGGAGGCCGGT > NC_000913/3135530‑3136024 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |