| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 974,449 | 0 | A | G | 24.0% | 89.6 / 10.3 | 51 | D44G (GAT→GGT) | mukF | chromosome partitioning protein MukF |
| Reads supporting (aligned to +/- strand): ref base A (13/25); new base G (12/0); total (26/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.57e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
GCTATGAAGCATTACTTGAATTAGAAACGCGTTATTGCCGTCAGGAACCGTATATTACCCTGGGGCGTTATATTCATGTCACCGCGCGCAAACCGCAGAGCAAGGATAAAGTATGAGTGAATTTTCCCAGACAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCC‑AATAACGCGATCAACGACATGGTGCGTCAACGTCTGCTG‑AACCGCTTTACC‑AGCGAGCAGGCGG‑AAGGGAACGCAATTTACCGTCTGACGCCGCTCGGCATCGGCA‑TTACTGACTACTACATCCGTCAGCGCGAGTTTTCTACGCTGCGTCTTTCTATG > NC_000913/974207‑974699 | gCTATGAAGCATTACTTGAATTAGAAACGCGTTATTGCCGTCAGGAACCGTATATTACCCTGGGGCGTTATATTCATGTCACCGCGCGCAAACCGCAGAGCAAGGATAAAGTATGAGTGAATTTTCCCAGACAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTTAACGGCGAGCGGCTGGGTgggtgg > 1:385112/1‑246 (MQ=255)gCTATGAAGCATTACTTGAATTAGAAACGCGTTATTGCCGTCAGGAACCGTATATTACCCTGGGGCGTTATATTCATGTCACCGCGCGCAAACCGCAGAGCAAGGATAAAGTATGAGTGAATTTTCCCAGACAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTga < 1:319969/249‑1 (MQ=255) ttACTTGAATTAGAAACGCGTTATTGCCGTCAGGAACCGTATATTACCCTGGGGCGTTATATTCATGTCACCGCGCGCAAACCGCAGAGCAAGGATAAAGTATGAGTGAATTTTCCCAGACAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCCAGCGTCTGGATGGGGAGATGGGTGAAggg > 1:149051/1‑250 (MQ=255) ccTTGAAATAAAAACGGTTTATTGCCGCCAGGATCCGTATATTACCCAGTGGCGTTATACTCATGTCACCGCGCGCAATCCGCAGAGCAGGGATAAAGTATGAGTGAATTTTCCCAGCCAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTGCTCCGTCGCGCTGCCGGTAGGCCGACTCTCTTTTCTGCTGGCGGTTGCGACGCTGAACGGCGAGCGTCGGGATGGTCAGATGAGTGAAGGCg < 2:16666/249‑1 (MQ=255) gtaaCGCGTGATTGCCGTCATGAACCGTATAGTACCCTGGTGCGTTATATTAATGTCACCGTGCGCAAACCGCAGAGCAAGGATAAAGTATGAGTGAATTTTCCCAGACAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCACTGTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGTGGAt < 2:500973/249‑1 (MQ=255) gAAACGCGTTATTGCCGTCAGGAACCGTATATTACCCTGGGGCGTTATATTCATGTCACCGCGCGCAAACCGCAGAGCAAGGATAAAGTATGAGTGAATTTTCCCAGACAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGGCTGGGTGGTGGGATGAGTGAAGGCGGGCTGGGGGAt > 1:222572/1‑251 (MQ=255) aaaaCGCGTTATTGCCGTCAGGAACCGTATATTACCCTGGGGCGTTATATTCATGTCACCGCGCGCAAACCGCAGAGCAAGGATAAAGTATGAGTGAATTTTCCCAGACAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGAGGGTGAGATGAGTGAAGGCGAGCTGGTGGAt < 1:198935/250‑1 (MQ=255) tATTGCCGTCAGGAACCGTATATTACCCTGGGGCGTTATATTCATGTCACCGCGCGCAAACCGCAGAGCAAGGATAAAGTATGAGTGAATTTTCCCAGACAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTTCCACGCTGAACGGCGAGCGTCTGGATGGGGGGGTGAGTGAAGGCGGGCTGGTGGAGGCATTCCGc > 1:709608/1‑251 (MQ=255) tGCCGTCAGGAACCGTATATTACCCTGGGGCGTTATATTCATGTCACCGCGCGCAAACCGCAGAGCAAGGATAAAGTATGAGTGAATTTTCCCAGACAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑a < 1:285463/250‑1 (MQ=255) gTCAGGAACCGTATATTACCCTGGGGCGTTATATTCATGTCACCGCGCGCAAACCGCAGAGCAAGGATAAAGTATGAGTGAATTTTCCCAGACAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGGGAAGGCGGGCTGGGGGATGCCTTCCCGC‑Atgtgg > 1:304417/1‑250 (MQ=255) ccttccctacgctctgcggatcggTTATAGTAATGTCACCGCGCGCAAACCGAAGAACAAGGATAAAGTATGAGTGAATTTTCCTATACAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACGTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTTGTGGATGCATTCCGCC‑ATgtgagtga < 2:284330/228‑1 (MQ=255) tACCCTGGGGCGTTATATTCATGTCACCGCGCGCAAACCGCAGAGCAAGGATAAAGTATGAGTGAATTTTCCCAGACAGTCACCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTTCCCCGCTGTACGGCGAGCGTCTGGTCGGTGAGATGGGTGAAGGCGAGCTTGTGGGTGACTTTCGCC‑ATGTGATGGATGCGTTTGAG‑c > 1:178177/1‑250 (MQ=255) ggggCGTTATATTCATGTCACCGCGCGCAAACCGCAGAGCAAGGATAAAGTATGAGTGAATTTTCCCAGACAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAAcc < 1:38567/249‑1 (MQ=255) cGTTATATTCATGTCACCGCGCGCAAACCGCAGAGCAAGGATAAAGTATGAGTGAATTTTCCCAGACAGCCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGGGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGaa < 2:23160/251‑1 (MQ=255) aGGATAAAGTATGAGTGAATTTTCCCAGACAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCC‑AATAACGCGATCAACGACa < 1:28859/251‑1 (MQ=255) gATAAAGTATGAGTGAATTTTCCCAGACAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCGGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCC‑AATAACGCGATCAACGACATg < 1:705475/251‑1 (MQ=255) aaaGTATGAGTGAATTTTCCCAGACAGTCCCCGAACTGGTTGCCTGGGCCAGACAAAATGACTTCTCCCTCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGGTGGTGAGATGAGGGAAGGCGCGCTGGGGGATGCATTCCGCC‑ATGTGGGTGATGTGTTTGAG‑CCAACCCGCGAAACCATCGGCGTGGGCGCC‑CATAACACGGTAAACGACCTGGTg > 1:414680/1‑251 (MQ=255) aaaGTATGAGTGAATTGTCCCAGACAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCC‑AATAACGCGATCAACGACATGGt < 1:667060/250‑1 (MQ=255) aGTATGAGTGAATTTTCCCAGACAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTTGACGGCGAGCGTCTGGGTGGGGAGATGAGGGAAGGCGAGCTGGGGGGTGCATTCCGCC‑CTGTGAGTGATGCGTTTGAG‑CGAACCAGCGAAAACATCGGGGTGGGCGCC‑CAAAAAGCGATCAACGACATGGGGCg > 1:526374/1‑251 (MQ=255) aGTGAATTTTCCCAGACAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCGCCATCTCGCTGCCGGTAGACCGACTCTCTTGTCTGCTGGCGGTTGCCACGCTGTACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTg < 2:461781/187‑1 (MQ=255) gAATTTTCCCAGACAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCC‑AATAACGCGATCAACGACATGGTGCGTCAACGTct < 1:96213/251‑1 (MQ=255) cccAGACAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTTCCCCGCTGAACGGGGAGAGTCTGGATGGTGGGATGAGGGACAGCGAGCTAGGGGAAGGATTCCCCCCATGT‑AGTGTAGCGTTTGAGGCAAACC‑GCGCAACCCTACGCGTGCGCGCCCAATA‑CGCGCACAACGACATAGTGCGTCaaactactactaac > 2:421545/1‑239 (MQ=255) aGACAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCt < 2:111567/139‑1 (MQ=255) aGACAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGGCTGGGTGGTGAGATGAGTGAAGGCGAGCt > 1:111567/1‑139 (MQ=255) cAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGGGGGATGAGTGAAGGCGGGCTGGGGGGTGCATTCCGCC‑CTGTGAGTGATGCGTTTGAG‑CAAACCAGCGGAACCATCGGCGTGGGCGCC‑CATAACCGGATCAACGACAAGGTGCGTCAACggcctccggaccccttt > 1:161911/1‑235 (MQ=255) ccccGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCTACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCC‑AATAACGCGATCAACGACATGGTGCGTCAACGTCTGCTG‑AACCGCTTTACC‑a < 1:480177/251‑1 (MQ=255) cccGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGGTGGTGAGATGAGTGAAGGCGGGCTGGGGGGTGCATTCCGCC‑ATGTGAGTGATGCGGTTGAG‑CAAACCAGCGAAACCATCGGCGGGGGCGCC‑AAAAACGCGATCAACGACATGGTGGGTCAACGGCTGCTG‑AAACGCCTTAcc > 1:459694/1‑249 (MQ=255) ggTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCC‑AATAACGCGATCAACGACATGGTGCGTCAACGTCTGCTG‑AACCGCTTTACC‑AGCGAGCAg < 2:222572/250‑1 (MQ=255) gTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGGAAGGCGAGCGTCTGGATGGGGAGATGGGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGGGATGCGTTTGAG‑GAAACCAGCGGAAACATCGGCGTGGGCGCC‑AATAAAGCGGTCACCGACACGGGGCGTCCAAGTCTGCTG‑CACCCCTTTACC‑CGCGAGCAggg > 1:106261/1‑250 (MQ=255) cTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGGTGGTGAGATGAGTGAAGGCGAGCTGGGGGATGCATTCCGCC‑CTGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCC‑CATAACGCGATCAAAGACATGGTGCGGCAACGTCTGCTG‑AACCCCCTTACC‑AGCGAGCAGGCggg > 1:269770/1‑248 (MQ=255) aaaTGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCCCCCTGAACCGCGGGCGTCTGGGTGGTGAGATGGGGGAAGGCGAGCTGGGGGGTGCATTCCGCC‑ATGTGAGTGATGCGGTTGAG‑CAAACCCGCGAAACCATCGGCGTGCGGGCC‑AAAAAAGCCGTCAAACACATGGTGCGTCCACGTCCTCTGCACCCCCTTTAC‑‑AGCGAGCAGGGGG‑GAGGGGACGCCAttt > 1:326676/1‑251 (MQ=255) aaaTGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCC‑AATAACGCGATCAACGACATGGTGCGTCAACGTCTGCTG‑AACCGCTTTACC‑AGCGAGCAGGCGG‑AAGGGAACGCAAttt < 1:282886/251‑1 (MQ=255) tGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTTGGTGGGGAGGTTAGGGAAGGCGAGCTGGTGGGTGCATTCCGCC‑CTGTGAGTGATGCGTTTGAG‑CAAAACAGCGAAACCATCGGCGTGGGCCCC‑CATAAAGCGATCCAAGACAAGGTGCGGCAACGTCCGCTGGAACC‑CTTTTAC‑AGCGGGCAGGCGG‑AAggggaagcaaatttcc > 1:208782/1‑238 (MQ=255) tctcCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCC‑AATAACGCGATCAACGACATGGTGCGTCAACGTCTGCTG‑AACCGCTTTACC‑AGCGAGCAGGCGG‑AAGGGAACGCAATTTACCGTc < 1:312332/249‑1 (MQ=255) ccATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCC‑AATAACGCGATCAACGACATGGTGCGTCAACGTCTGCTG‑AACCGCTTTACC‑AGCGAGCAGGCGG‑AAGGGAACGCAATTTACCGTCTGAcg < 1:275609/251‑1 (MQ=255) aTCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCCCGCTGAACGGCGAGCGTCTGGGTGGTGGGATGAGGGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGGTTGAG‑CAAACCAGCGAAACCATCGGCGGGCGCGCC‑CAAAAAGCGGACAACGACATGGGGCGGCCACGGCTGCTT‑AACCGCTTTTCC‑AGCGAGCAGGGGG‑AAGGGGACGCAATTTATCGCCTGAcgcc > 1:171110/1‑251 (MQ=255) tGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCCCGCTGAACGGCGAGCGTCTGGGTGGTGAGATGAGGGAAGGCGAGCTGGGGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGGGCGCC‑CATAACGCGGACAACGAAATGGGGGGGCCACGTCTGCTG‑AAACGCCTTACCCAG‑GGGCAGGGGGGAGGGGAAGGCA‑TTTACCGTCTGACGCCGCccggc > 1:258306/1‑251 (MQ=255) gTAGACCGACTCTCTTTGCGGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCC‑AATAACGCGATCAACGACATGGTGCGTCAACGTCTGCTG‑AACCGCTTTACC‑AGCGAGCAGGCGG‑AAGGGAACGCAATTTACCGTCTGACGCCGCtcggcatcgg < 2:16726/251‑1 (MQ=255) ctctTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCC‑AATAACGCGATCAACGACATGGTGCGTCAACGTCTGCTG‑AACCGCTTTACC‑AGCGAGCAGGCGG‑AAGGGAACGCAATTTACCGTCTGACGCCGCTCGGCATCGGCA‑TTACTGa < 1:521677/249‑1 (MQ=255) ctTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGGTGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCC‑AATAACGCGATCAACGACATGGTGCGTCAACGTCTGCTG‑AACCCCTTTACC‑AGCGAGCAGGCGG‑GAGGGAACGCAATTTACCGTCTGACGCCGCtcggcagatcgggagagaccccc > 1:162967/1‑234 (MQ=255) ctTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCC‑AATAACGCGATCAACGACATGGTGCGTCAACGTCTGCTG‑AACCGCTTTACC‑AGCGAGCAGGCGG‑AAGGGAACGCAATTTACCGTCTGACGCCGCtcggc < 2:162967/233‑1 (MQ=255) gctgGCGGTTGCGATGCTGAACGGCGAGCTTCTTGATGGTGAGATTAGTGAAGGTGAGATGGTGGAGGCATTCCGCC‑ATTGGAGTGATTCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCT‑AATAACGCGATCAACGACATGGTGCGTCAACGTCTGCTG‑AACCGCTTTACC‑AGCGAGCAGGCTG‑AAGGGAACGCAATTTACCGGCTGACGCCGCCCGGCATCGGCA‑TTACTGACTACTACag < 2:12577/249‑2 (MQ=255) gctgGCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCC‑AATAACGCGATCAACGACATGGTGCGTCAACGTCTGCTG‑AACCGCTTTACC‑AGCGAGCAGGCGG‑AAGGGAACGCAATTTACCGTCTGACGCCGCTCGGCATCGGCA‑TTACTGACTACTACATc < 1:297265/250‑1 (MQ=255) ggCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCC‑AATAACGCGATCAACGACATGGTGCGTCAACGTCTGCTG‑AACCGCTTTACC‑AGCGAGCAGGCGG‑AAGGGAACGCAATTTACCGTCTGACGCCGCCCGGCATCGGCA‑TTACTGACTACTACATCCGTc > 1:208629/1‑251 (MQ=255) cGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCC‑AATAACGCGATCAACGCCATGGTGCGTCAACGTCTGCTG‑GACCGCTTTACC‑AGCGCGCAGGCGG‑AAGGGAACGCAATTTACCGTCTGAAGCCGCTCGGCCTCGGCA‑TTACCGACTACTTCATCCGttac > 2:162371/1‑248 (MQ=255) ttGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCC‑AATAACGCGATCACCGACATGGTGCGTCAACGTCTGCTG‑AACCGCTTTACC‑AGCGAGCAGGCGG‑AAGGGAACGCCATTTACCGTCTGCCGCCGACCGGCCTCGGCC‑TTACTGACTACCACATCCGTCAgcgc > 2:679789/1‑251 (MQ=255) gCTGAACGGCGAGCGTCTGGATGGTGAGATGCGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCC‑AATAACGCGATCACCGACATGGTGCGTCAACGTCTGCTG‑AACCGCTTTACC‑AGCGAGCAGGCGG‑GAGGGAACGCAATTTCCCGACTGCCGCCGCCACGCATCA‑CACTTACTGACTACTAACTCCGTCAgacagagtttt > 2:705877/1‑241 (MQ=255) aCGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGGGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCC‑AATAACGCGATCAACGACATGGTGCGTCAACGTCTGCTG‑AACCGCTTTACC‑AGCGAGCAGGCGG‑AAGGGAACGCAATTTACCGTCTGACGCCGCTCGGCATCTGCA‑TTACTGACTACTACATCCGTCAGCGCGAGTTTTCTACg < 2:258306/251‑1 (MQ=255) cGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCC‑AATAACGCGATCAACGACATGGTGCGTCAACGTCTGCTG‑AACCGCTTTACC‑AGCGAGCAGGCGG‑AAGGGAACGCAATTTACCGTCTGACGCCGCTCGGCATCGGCA‑TTACTGACTACTACATCCGTCAGCGCGAGTTTTCTACGCTGc > 1:639751/1‑251 (MQ=255) cGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCC‑AATAACGCGATCAACGACATGGTGCGTCAACGTCTGCTG‑AACCGCTTTACC‑AGCGAGCAGGCGG‑AAGGGAACGCAATTTACCGTCTGACGCCGCTCGGCATCGGCA‑TTACTGACTACTACCTCCGTCAGCGCGAGTTTTCTACGCTGCGTCt > 1:516442/1‑251 (MQ=255) ggATGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCC‑AATAACGCGATCAACGACATGGTGCGTCAACGTCTGCTG‑AACCGCTTTACC‑AGCGAGCAGGCGG‑AAGGGAACGCAATTTACCGTCTGACGCCGCTCGGCATCGGCA‑TTACTGACTACTCCATCCGTCAGCGCGGGTTTTCTACGCTGCGTCTTTCt > 1:243735/1‑250 (MQ=255) aTGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCC‑AATAACGCGATCAACGACATGGTGCGTCAACGTCTGCTG‑AACCGCTTTACC‑AGCGAGCAGGCGG‑AAGGGAACGCAATTTACCGTCTGACGCCGCTCGGCATCGGCA‑TTACTGACTACTACATCCGTCAGCGCGAGTTTTCTACGCTGCGTCTTTCTATg < 1:596518/251‑1 (MQ=255) | GCTATGAAGCATTACTTGAATTAGAAACGCGTTATTGCCGTCAGGAACCGTATATTACCCTGGGGCGTTATATTCATGTCACCGCGCGCAAACCGCAGAGCAAGGATAAAGTATGAGTGAATTTTCCCAGACAGTCCCCGAACTGGTTGCCTGGGCCAGAAAAAATGACTTCTCCATCTCGCTGCCGGTAGACCGACTCTCTTTTCTGCTGGCGGTTGCCACGCTGAACGGCGAGCGTCTGGATGGTGAGATGAGTGAAGGCGAGCTGGTGGATGCATTCCGCC‑ATGTGAGTGATGCGTTTGAG‑CAAACCAGCGAAACCATCGGCGTGCGCGCC‑AATAACGCGATCAACGACATGGTGCGTCAACGTCTGCTG‑AACCGCTTTACC‑AGCGAGCAGGCGG‑AAGGGAACGCAATTTACCGTCTGACGCCGCTCGGCATCGGCA‑TTACTGACTACTACATCCGTCAGCGCGAGTTTTCTACGCTGCGTCTTTCTATG > NC_000913/974207‑974699 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |