New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1979270	NA (NA)	51 (0.780)	43/480	0.5	91.1%	noncoding (1/768 nt)	IS1	repeat region
	?	NC_000913	= 4541023	5 (0.080)					coding (67/603 nt)	fimB	Type 1 fimbriae regulatory protein FimB

TATGGCAACGTTATTATAATTAACAGTTGCTACTCCATTTAAGTTCACTCAGAAGAACTGGTCCACTTACGTTAGTTATTAAGCAAACGTTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAAAGCAGCAAATACCGGGCCTCATGCAGCACGTAATTATTGTCTGACTTTGCTTTGTTTTATTCATGGTTTCCGGGCGAGTGAAATTTGTCGATTGAGGATTTCGGATATTGATCTTAAGGCAAAGTGTATATATATCCATCGATTAAAAAAAGGCTTTTCAACAACGCACCCGCTATTGAATAAAGAAGTTCAGGCTTTAAAAAACTGGTTGAGTATCCGTACTTCGTACCCGCATGCTGAG  >  NC_000913/4540777‑4541265                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                   tATGGCAACGTTATTATAATTAACAGTTGCTACTCCATTTAAGTTCACTCAGAAGAAATGGTCCACTTACGTTAGTTATTAAGCAAACGTTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAACAGGAACTTCCTGACCCATAGTGAAATCGCATCACTCCTTAggtg                                                                                                                                                                                                                                                <  1:96168‑M2/251‑5 (MQ=255)           ttattaTAATTAACAGTTGCTACTCCATTTAAGTTCACTCAGAAGAACTGGTCCACTTACGTTAGTTATTAAGCAAACGTTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgcca                                                                                                                                                                                                                                       <  1:214163‑M2/250‑14 (MQ=255)                    ttAACAGTTGCTACTCCAATTAAGTTCACTCAGAAGAACTGGTCCACTTACGTTAGTTATTAAGCAAACGTTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGTGAAAAACGATGAAGAATAAGGCTGTTACCCAAAAAAGGAACTTCCTGACCCATAATGAAATCGAATCACTCCTTAggcgatgctgccaaattactgat                                                                                                                                                                                                                             <  2:132783‑M2/251‑24 (MQ=255)                       aCAGTTGCTACTCCATTTAAGTTCACTCAGAAGAACTGGTCCACTTACGTTAGTTATTAAGCAAACGTTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgattt                                                                                                                                                                                                                           <  1:231028‑M2/250‑26 (MQ=255)                         aGTTGCTACTCCATTTAAGTTCACTCAGAAGAACTGGTCCACTTACGTTAGTTATTAAGCAAACGTTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagt                                                                                                                                                                                                                        <  1:560611‑M2/251‑29 (MQ=255)                            tactactacaTTTAAGTTCACTCAGAAGAACTGGCCCACTTACGTTAGTTATTAAGCAAACGTTCGCTTTTATAAACATACTCAGGATAAAATTGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGATGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgt                                                                                                                                                                                                                      <  2:397215‑M2/248‑31 (MQ=255)                                    cATTTAAGTTCACTCAGAAGAACTGGTCCACTTACGTTAGTTATTAAGCAAACGTTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtg                                                                                                                                                                                                             >  1:455755‑M2/1‑212 (MQ=255)                                         aaGTTCACTCAGAAGAACTGGTCCACTTACGTTAGTTATTAAGCAAACGTTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgttttt                                                                                                                                                                                                        >  1:665683‑M2/1‑207 (MQ=255)                                                 tCAGAAGAACTGGTCCACTTACGTTAGTTATTAAGCAAACGTTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgct                                                                                                                                                                                                <  1:431725‑M2/251‑53 (MQ=255)                                                         aCTGGTCCACTTACGTTAGTTATTAAGCAAACGTTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAAAGCAGCAAATACCGGGCCTCATGCAGCACGGAATTATTGTCTGACTTTGCTTTGTTTTa                                                                                                                                                                                        <  2:49119/251‑1 (MQ=255)                                                            ggTCCACTTACGTTAGTTATTAAGCAAACGTTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttc                                                                                                                                                                                     >  1:486857‑M2/1‑188 (MQ=255)                                                                      cGTTAGTTATTAAGCAAACGTTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatc                                                                                                                                                                           <  1:232259‑M2/251‑74 (MQ=255)                                                                       gttcgttaTTAAGCAAACGTTCGCATTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAAACCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGACAACCGATGAAGAATACGGCTGATAACAAAACAAGGAACTTCCTGACCCATAGTGAAATCGATTCACTCCTTAggagatactgccaacttactgatttagtgtatgatggtgtttttgagatgctccagtggcttctgtttctatcc                                                                                                                                                                          <  2:431512‑M2/251‑75 (MQ=255)                                                                       gttagttaTTAAGCAAACGTTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatca                                                                                                                                                                          >  2:59314‑M2/1‑177 (MQ=255)                                                                                atttcaaacGTTCGCTTTTAAAAACATAATCAGGATAAAAATGTTGGATTAATGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTTATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtcccg                                                                                                                                                                 >  2:535533‑M2/5‑168 (MQ=255)                                                                                    cccccgttcTCTTTTATAAACCTCAACAGGAAAAAAAAGTAGAAATATAGCTAACCCAACACAGCTAGTGCGCGTATGTAATAATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgcaaacttactgatttagtgtatgatggtgtttttgaggggctccaggggcttctgtttctatcagctgtccct                                                                                                                                                                 <  1:535533‑M2/243‑84 (MQ=255)                                                                                      aaCGTTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgtt                                                                                                                                                           <  1:122037‑M2/251‑90 (MQ=255)                                                                                                tttATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactg                                                                                                                                                  <  2:324826‑M2/250‑99 (MQ=255)                                                                                                           aaTCAGGATAAAAATGTTGGATTATTGCTAACACAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAACAGGAACTTCATGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctcatgacggggtggtgc                                                                                                                                      <  2:476646‑M2/251‑111 (MQ=255)                                                                                                              cAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgt                                                                                                                                    <  2:707630‑M2/250‑113 (MQ=255)                                                                                                                                      cTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagaaccgccggacatc                                                                                                           <  2:376184‑M2/251‑138 (MQ=255)                                                                                                                                         aCCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagc                                                                                                        >  2:300256‑M2/1‑111 (MQ=255)                                                                                                                                             aGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgct                                                                                                     <  1:382913‑M2/250‑144 (MQ=255)                                                                                                                                             aGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgct                                                                                                     <  2:158785‑M2/250‑144 (MQ=255)                                                                                                                                               cacaGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAATGCTGATAACAAAAAAAGGAACTTCCTGACCCCTAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgaatgatggtgtttttgaggttctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaatcaccgccggacatcagcgctatc                                                                                                  <  1:575643‑M2/251‑147 (MQ=255)                                                                                                                                                acaGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAAAGCAGCAAATACCGGGCCTCATGCAGCACGTAATTATTGTCTGACTTTGCTTTGTTTTATTCATGGTTTCCGGGCGAGTGAAATTTGTCGATTGAGGATTTCGGATATTGATCTTAAGGCAAAGTGTATATATATCCATCGATTa                                                                                                  >  1:199368/1‑250 (MQ=255)                                                                                                                                                     tAGTGCGCGTCTGTACTTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGGGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatcactgct                                                                                            <  2:172661‑M2/251‑153 (MQ=255)                                                                                                                                                             gTCTTTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTGCCTGACCCATAGGGAAATAGAATCACTCCGTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtcccgcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcacggc                                                                                    >  2:232259‑M2/1‑91 (MQ=255)                                                                                                                                                                     ttATAAGGGAAACACGATGAAGAATAAGGCTGATAACAAATAAAGGAACTTACTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgctggtgtttttgaggtgctccagtggcttct                                                                                                                                                                                    <  2:240620‑M2/147‑65 (MQ=255)                                                                                                                                                                     ttATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttct                                                                                                                                                                                    >  1:240620‑M2/1‑83 (MQ=255)                                                                                                                                                                      tataAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCCCTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtcaaac                                                                            <  1:308861‑M2/250‑169 (MQ=255)                                                                                                                                                                         aaGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatgg                                                                        <  2:165802‑M2/251‑173 (MQ=255)                                                                                                                                                                           gggAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggca                                                                      >  1:534231‑M2/1‑77 (MQ=255)                                                                                                                                                                              aaaaaCGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaccttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaact                                                                   >  2:141186‑M2/1‑74 (MQ=255)                                                                                                                                                                              aaaaaCGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaact                                                                   <  2:212133‑M2/251‑178 (MQ=255)                                                                                                                                                                                        aagaaTAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcact                                                         <  1:569052‑M2/251‑188 (MQ=255)                                                                                                                                                                                            aTAAGGCTGATAACAAAAAAAGGCACTTCCTGACCCATAGTGAAATCGAATCACTACTTAAAGCAGCAAATACCGGGCCTCATGCAGCACGTAATTATTGTCTGACTTTGCTTTGTTTTATTCATGGTTTCCGGTCGAGTGAAATTTGTCGATTGAGGATTTCGGATATTGATCTTAAGGCAAAGTGTATATATATCCATCGATTAAAAAAATGCTTTTCAAGAACGCACCCGCTATTGCATAAAGAAGtt                                                     >  2:154422/1‑251 (MQ=255)                                                                                                                                                                                              aaGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggagatgctgccaacttactggtttagtgtatgatggtgtttttgaggggctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgggtaacggcaaaatcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcacctgaagttcacttacaac                                                   <  2:495529‑M2/251‑194 (MQ=255)                                                                                                                                                                                               aGGCTTATAACAAAAAAAGGAACTTCCTGACCCAGAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtttgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctccggttcagctactgacggggtggtgcgtaacggcaaaagccccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccg                                                  >  2:1222‑M2/1‑57 (MQ=255)                                                                                                                                                                                               aGGCAGATAACAAAAAAAGGAACTTCCTGACCCATAGGGAAATCGAATCACTCCTTAggtgatgctgccaccttactgattttgtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttctcttacaccg                                                  >  2:231028‑M2/1‑57 (MQ=255)                                                                                                                                                                                                  cTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgctt                                               <  1:211002‑M2/251‑198 (MQ=255)                                                                                                                                                                                                         aaaaaaaagGACCTGCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccagcttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcttaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacc                                        >  1:339147‑M2/2‑47 (MQ=255)                                                                                                                                                                                                           aaaaaaGGAACTTACTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccg                                      <  1:142206‑M2/251‑207 (MQ=255)                                                                                                                                                                                                                 ggAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaacgcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgc                                <  1:35390‑M2/251‑213 (MQ=255)                                                                                                                                                                                                                 ggAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgc                                <  1:646772‑M2/251‑213 (MQ=255)                                                                                                                                                                                                                           gACCCATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgcccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctcgcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaaccctgtacgcaccagaaaat                      >  1:397215‑M2/1‑29 (MQ=255)                                                                                                                                                                                                                            aCCCATAGTGAAATCGAATCAATCCTTAggtgatgctgccaacttactgctttagtgtatgatggtttttttgaggtgctcaagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcttaacggcaaaagcaccgccggacctccgcgctctctctgctctacctgccgtaaaacaggtcaactgcagttcacttaccccgcttattaaccctgaacgcaccaaaaaatc                     <  2:508914‑M2/251‑224 (MQ=255)                                                                                                                                                                                                                             cccATAGTGAAATCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctaccagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatca                    >  1:11668‑M2/1‑27 (MQ=255)                                                                                                                                                                                                                               catacggaaagcgTATCACTCCTTAggtgcttctgccccattactgatttagtgtatgatggtgtttttgagttgctccagtgtcttctgtttctataagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaatcaccgccggacatcagcgctaactcttctctcactgccgtaaaacatggcaactgcagttctcttacaccgcttctcaacccggtccgcaccagaaaatcatt                  >  2:122037‑M2/7‑25 (MQ=255)                                                                                                                                                                                                                                     gAAATCGACTCACTCCTTAggtgatgctgccaacttactgatttagtgaatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaacgcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagctcacttacaccgcttctcaacccggtacgcaccagaaaatcattgctatg            <  2:324906‑M2/251‑233 (MQ=255)                                                                                                                                                                                                                                      aaaTCGAATCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaagacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcattgatatgg           <  1:97853‑M2/251‑234 (MQ=255)                                                                                                                                                                                                                                            aaTCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcacccgaaaatcattgatatggccatg      <  2:460110‑M2/250‑239 (MQ=255)                                                                                                                                                                                                                                            aaTCACTCCTTAggtgatgctgccaacttactgatttagtgtatgatggtgtttttgaggtgctccagtggcttctgtttctatcagctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaagcaccgccggacatcagcgctatctctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcattgatatggccatg      <  1:189857‑M2/250‑239 (MQ=255)                                                                                                                                                                                                                                               cACTCCTTAgggtatgctgccaactttctgatttagtgtatgatgtggtttttgaggtgctccagtggcttctgtttctatcatctgtccctcctgttcagctactgacggggtggtgcgtaacggcaaaatcaccgccggacatcagcgctatccctgctctcactgccgtaaaacatggcaactgcagttcacttacaccgcttctcaacccggtacgcaccagaaaatcattgatatggccatgaatg  >  2:506600‑M2/1‑9 (MQ=255)                                                                                                                                                                                                                                                   ccTTAAAGCAGCAAATACCGGGCCTCATGCAGCACGTAATTATTGTCTGACTTTGCTTTGTTTTATTCATGGTTTCCGGGCGAGTGAAATTTGTCGATTGAGGATTTCGGATATTGATCTTAAGGCAAAGTGTATATATATCCATCGATTAAAAAAAGGCTTTTCAACAACGCACCCGCTATTGAATAAAGAAGTTCAGGCt                                               <  2:196897/202‑1 (MQ=255)                                                                                                                                                                                                                                                   ccTTAAAGCAGCAAATACCGGGCCTCATGCAGCACGTAATTATTGTCTGACTTTGCTTTGTTTTATTCATGGTTTCCGGGCGAGTGAAATTTGTCGATTGAGGATTTCGGATATTGATCTTAAGGCAAAGTGTATATATATCCATCGATTAAAAAAAGGCTTTTCAACAACGCACCCGCTATTGAATAAAGAAGTTCAGGCt                                               >  1:196897/1‑202 (MQ=255)                                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                                   TATGGCAACGTTATTATAATTAACAGTTGCTACTCCATTTAAGTTCACTCAGAAGAACTGGTCCACTTACGTTAGTTATTAAGCAAACGTTCGCTTTTATAAACATAATCAGGATAAAAATGTTGGATTATTGCTAACCCAGCACAGCTAGTGCGCGTCTGTAATTATAAGGGAAAAACGATGAAGAATAAGGCTGATAACAAAAAAAGGAACTTCCTGACCCATAGTGAAATCGAATCACTCCTTAAAGCAGCAAATACCGGGCCTCATGCAGCACGTAATTATTGTCTGACTTTGCTTTGTTTTATTCATGGTTTCCGGGCGAGTGAAATTTGTCGATTGAGGATTTCGGATATTGATCTTAAGGCAAAGTGTATATATATCCATCGATTAAAAAAAGGCTTTTCAACAACGCACCCGCTATTGAATAAAGAAGTTCAGGCTTTAAAAAACTGGTTGAGTATCCGTACTTCGTACCCGCATGCTGAG  >  NC_000913/4540777‑4541265

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.