| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,978,083 | +A | coding (115/351 nt) | flhD ← | DNA‑binding transcriptional dual regulator FlhD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,978,083 | 1 | . | A | 95.3% | 136.6 / 0.9 | 43 | coding (115/351 nt) | flhD | DNA‑binding transcriptional dual regulator FlhD |
| Reads supporting (aligned to +/- strand): ref base . (1/1); new base A (25/16); total (26/17) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.30e-01 | |||||||||||
TTTTCACTCATGATCAGGCCCTTTTCTTGCGCAGCGCTTCTTCAGGCTGATTAACATCATTCAGCAAGCGTGTTGAGAGCATGATGCCGGTATGAATTTGCTGGAGATCGTCAACGCGGGAATCTTGCGTCAACTGAGTAATCGTCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TT‑TATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACAATCAAACGCTGTGCAAGTAGTAAATATGACAAGTTGATGTCATAAATGTGTTTCAGCAACTCGGAGGTATGCATTATTCCCACCCAGAATAACCAACTTTATTTTTATGCGGTTTCACCGCACCCCGTGATGTCGCCGGGAAGCCCCGGTAAAAAATAATTAGCATTAGAATAGTTGCGATAAGCTGCAATAAGCAGAACC > NC_000913/1977834‑1978324 | ttttCACTCATGATCAGGCCCTTTTCTTGCGCAGCGCTTCTTCAGGCTGATTAACATCATTCAGCAAGCGTGTTGAGAGCATGATGCCGGTATGAATTTGCTGGAGATCGTCAACGCGGGAATCTTGCGTCAACTGAGTAATCGTCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑tt < 1:441753/250‑1 (MQ=255) cACTCATGATCAGGCCCTTTTCTTGCGCAGCGCTTCTTCAGGCTGATTAACATCATTCAGCAAGCGTGTTGAGAGCATGATGCCGGTATGAATTTGCTGGAGATCGTCAACGCGGGAATCTTGCGTCAACTGAGTAATCGTCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑ttatat < 1:506907/250‑5 (MQ=255) aCTCATGATCAGGCCCTTTTCTTGCGCAGCGCTTCTTCAGGCTGATTAACATCATTCAGCAAGCGTGTTGAGAGCATGATGCCGGTATGAATTTGCTGGAGATCGTCAACGCGGGAATCTTGCGTCAACTGAGTAATCGTCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGc > 1:634207/1‑251 (MQ=255) aTGATCAGGCCCTTTTCTTGCGCAGCGCTTCTTCAGGCTGATTAACATCATTCAGCAAGCGTGTTGAGAGCATGATGCCGGTATGAATTTGCTGGAGATCGTCAACGCGGGAATCTTGCGTCAACTGAGTAATCGTCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCg > 1:638745/1‑249 (MQ=255) gttCAGGCCCTTTTCTTGCGCATCGCTTCTTCATGCTGATTATCATCATTCAGCAAGCGTGTTGAGAGCATGATGCCGGTATGAATTTGCTGGAGATCGTCAACGCGGGAATCTTGCGTCAACTGAGTAATCGTCTGGTGGCTGTCAAAACGGACGTGTCAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGTAAGAGTCAGTGCCGCTAACGTTGTCGCTATTTCTTCA‑TTATATGCCGAGAc < 1:398516/249‑1 (MQ=255) cttcttCAGGCTGATTAACATCATTCAGCAAGCGTGTTGAGAGCATGATGCCGGTATGAATTTGCTGGAGATCGTCAACGCGGGAATCTTGCGTCAACTGAGTAATCGTCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTg > 1:216578/1‑251 (MQ=255) tcAGGCTGATTAACATCATTCAGCAAGCGTGTTGAGAGCATGATGCCGGTATGAATTTGCTGGAGATCGTCAACGCGGGAATCTTGCGTCAACTGAGTAATCGTCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACa > 1:584316/1‑250 (MQ=255) aGGCTGATTAACATCATTCAGCCCACGTGTTGAGAGCATGATGCCGGTATGAATTTGATGGAGATCGACAACGCTGGAATCTTGCGTCAACTGAGTAATCGTCTGGTGGCTGTCAACACGGAAGTGACAAACAAGTTGATTGGTTTCTGCCCGCTTAACCATTTGCGGAAGAGTCCGTGCCGCTAACGTTGTCGCCCTTTCTTCA‑TTATATGCCGAGCCGAACCATAGCTGCCGCTTTGTCCTGAACAAtt > 2:258058/1‑250 (MQ=255) ttAACATCATTCAGCAAGCGTGTTGAGAGCATGATGCCGGTATGAATTTGCTGGAGATCGTCAACGCGGGAATCTTGCGTCAACTGAGTAATCGTCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACAATCAAACGCt > 1:56690/1‑251 (MQ=255) tAACATCATTCAGCAAGCGTGTTGAGAGGATGATGGCGGTATGCATTTGCTGGAGATCGTCAACGCGGGAATCTTGCGGCAACTTAGTAATCGGCTGGTGGCTGTCAAAACGGAAGGGACAAACCAGTTGAGTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTGCAGTA‑TATGCCTATACGAAACAGAGCGGACGTTTTGTCCTGAACAATCAAACGCt < 2:697374/250‑1 (MQ=255) catTCAGCAAGCGTGTTGAGAGCATGATGCCGGTATGAATTTGCGGGAGATCGTCAACGCGGGAATCTTGCGTCAACTGAGTAATCGGCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACAATCAAACGCTGTGCAag < 1:671493/251‑1 (MQ=255) aGCGTGTTGAGAGCATGATGCCGGTATGAATTTGCTGGAGATCGTCAACGCGGGAATCTTGCGTCAACTGAGTAATCGTCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACAATAAAACGCTGTGCAAGAAGTAAat > 2:316558/1‑250 (MQ=255) gtggagaGCATGATGCCGGTATGTATTTGCTGGAGATCGTCAACGCGGGAATCTTGCGTCAACTGAGTAATCGTCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCGAGACGAAACATAGAGGACGCTTTGTCCTGAACAATCAAACGCTGTGCAAGTAGTAAATATGAc < 2:386294/247‑1 (MQ=255) tGAGAGCATGATGCCGGTAGGAATTTGCTGGAGATCGTCAACGCTGGAATCTTGCGTCAACTGAGTAATCGTCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACAATCAAACGCTGTGCAAGTAGTAAATATGACaa < 2:476305/250‑1 (MQ=255) atgatgCCGGTATGAATTTGCGGGAGATCGTCAACGCGGGAATCTTGCGTCAACTGATTAATCGTCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACTTTGTCGCCATTTCTTCA‑TTATATGCCGAGAGGAAACATAGCGGACGCTTTGTCCGGAACAATCAATCACTGTGCAAGTAGGAAATGTGACAAGGTGATGt < 2:335476/251‑1 (MQ=255) atgatgCCGGTATGAATTTGATGGAGATCGTCAACGCGGGAATCTTGCGTCCACTGAGTAATCGTCTGGTGGCTGTCACAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCC‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTAAACAATCAAACGCTGGGCAAGTAGTAAAAATGCAAAGTTGATGt > 2:490531/1‑251 (MQ=255) tgatgCTGGTATGAATTTGCTGGAGATCGTCAACGCGGGAATCTTGCGTCAACGGAGTAATCGTCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACAATCAAACGCTGTGCAAGTAGTAAATATGACAAGTTGAt < 1:660152/248‑1 (MQ=255) tgatgCCGGTATGAATTTGCTGGAGATCGTCAACGCGGGAATCTTGCGTCAACTGAGTAATCGTCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACAATCAAACGCTGTGCAAGAAGTAAATATGAAAAGTTGaa > 2:660152/1‑247 (MQ=255) gCCGGTATGAATTTGCTGGAGATCGTCACCGCGGGAATCTTGCGTCAACTGAGTAATCGTCTGGTGGCAGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCGCGACGAAACATAGCGGACGCTTTGTCATGAACAATCAAACGCTGTGCACGTAGTAAATATGACAAGTTGATGTCATa > 2:664055/1‑250 (MQ=255) ccGGTATTAAGTTGCTGGAGAGCGTCAACGCGGGAATCTTGCGTCAACTGAGTAATCGGCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCGAGACGAAACATAGCTGACGCTTTGTGCTGAACAATCAAACGCTGTGCAAGTAGTAAATATGACAAGTTGATGTCATaaa < 2:158009/251‑1 (MQ=255) aTTTGCTGGAGATCGTCAACGCGGGAATCTTGCGTCAACTGAGTAATCGTCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACAATCAAACGCTGTGCAAGTAGTAAATATGACAAGTTGATGTCATAAATGTGTTTc > 2:174598/1‑250 (MQ=255) gCTGGAGATCGTCAACGCGGGAATCTTGCGTCAACTGAGTAATCGTCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACAATCAAACGCTGTGCAAGTAGTAAATATGACAAGTTGATGTCATAAATGTGTTTCAGCaa < 1:109591/251‑1 (MQ=255) cTGGAGATCGTCAACGCGGGAATCTTGCGTCAACTGAGTAATCGTCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGATGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTCACGTTGTCGCCATTTCTTCA‑TTATATGCCGAGACGACACATAGCGGACGCTTTGTCCTGAACAATAAAACGCTGTGCAAGTCGTAAATATGACAATTTACTGACATAAATGTGTTTccacaac > 2:467952/1‑245 (MQ=255) aaCGCGGGAATCTTGCGTCAACTGAGTAATCGTCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACAATCAAACGCTGTGCAagta > 2:48450/1‑198 (MQ=255) aaCGCGGGAATCTTGCGTCAACTGAGTAATCGTCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACAATCAAACGCTGTGCAagta < 1:48450/198‑1 (MQ=255) gggAATCTTGCGTCAACTGAGTAATCGTCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACAATCAAACGCTGTGCAAGTAGTAAATATGACAAGTTGATGTCATAAATGTGTTTCAGCAACTCGGAGGTATGCattat > 1:402525/1‑251 (MQ=255) cTTGCGTCAACTGAGTAATCGTCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGCCGCTTTGTCCTGAACAATCAAACGCTGTGCAAGTAGTAAATATGACAAGTTGATGTCATAAATGTGTTTCAGCAACTCGGAGGTATGCATTATTcccac > 2:164986/1‑251 (MQ=255) gCGTCAACTGAGTAATCGTCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACAATCAAACGCTGTGCAAGTAGTAAATATGACAAGTTGATGTCATAAATGTGTTTCAGCAACTCGGAGGTATGCATTATTcccaccca < 1:566521/251‑1 (MQ=255) gTCAACTGAGTAATCGTCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCC‑TT‑TATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACAATCAAACGCTGTGCAAGTAGTAAATATGACAAGTTGATGTCATAAATGTGTTTCAGCAACTCGGAGGTATGCATTATTCCCACCCAGa > 2:307475/1‑250 (MQ=255) cAACTGAGTAATCGTCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCAGTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACAATCAAACGCTGTTCAAGTAGTAAATATGACAAGTTGATGTCATAAATGTGTTTCAGCAACTCGGAGGTATGCATTATTCCCACCCAGaa < 1:295512/250‑1 (MQ=255) aaCTGAGTAATCGTCTGGTGGCTGTCAAAACGGACGTGACAAACCAGTTGATTGGTTTCTGCCAGCTATACCATTTGCGGAAGCGGCAGAGCCGCTAACGTTGTGCCCATTTCTTCA‑TTATATGCCGAGATGAAACATAGCGGTCGCTTTGTCCTGAGCAATCAAACACTGGTCAAGTAGTAACTATGACATGTTGATGTCACAAATGTGTTTCAGCACCTCGGAGGTATGCATTATTCCAGCCCAGAAt > 2:196760/1‑250 (MQ=255) gtggCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGACGATTTGTCCTGAACAATCAAACGCTGTGCAAGTAGTAAATATGACAAGTTGATGTCATAAATGTGTTTCAGCAACTCGGAGGTATGCATTATTCCCACCCAGAATAACCAACTTTATTTTTAt > 1:703782/1‑251 (MQ=255) gTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACAATCAAACGCTGTGCAAGTAGTAAATATGACAAGTTGATGTCATAAATGTGTTTCAGCAACTCGGAGGTATGCATTATTCCCACCCAGAATAACCAACTTTATTTTTATGCGGtt > 1:80805/1‑251 (MQ=255) cAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCGCGACGAAACATAGCGGACGCTTTGt > 1:642106/1‑127 (MQ=255) aCGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACAATCAAACGCTGTGCAAGTAGTAAATATGACAAGTTGATGTCATAAATGTGTTTCAGCAACTCGGAGGTATGCATTATTCCCACCCAGAATAACCAACTTTATTTTTATGCGGTTTCACCg > 1:668848/1‑251 (MQ=255) gTTGATTGGTTTCTGCAAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCAATTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACAATCAAACGATGTGCAAGTAGTAAATATGACAAGTTGATGTCATAAATGTGTTTCAGCAACTCGGAGGTATGCATTATTCCCCCCCAGAATAACCAACTTTATTTTTATGCGGTTTCACCGCACCCCGAGATGTCGcc > 2:572040/1‑251 (MQ=255) ttCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTACTGAACAATCAAACGATGTGCAAGTAGTAAATATGACAAGTTGATGTCATAAATGTGTTTCAGCAACTCGGAGGTATGCATTATTCCCACCCAGAATAACCAACTTTATTTTTATGCGGTTTCACCGCACCCCGTGATGTCGCCGGGAAGcccc > 1:632118/1‑251 (MQ=255) cggCCAGCTTTACCATTTCCGGAAGAGTCAGTGCCGCTAACGTTCTCGCAATTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACAATCAAAAGCTGTGCAAGGAGTAAATATGACAAGTTGATGTCATAACTGTGTTTCAGCAACTCGGAGGTATGCCTTATTCCCACCCAGAATAACCAACTTTATTTTTATGCGGTTTAGCCGCACCCTGTGATGACACCGGGTAGCCCCgg > 2:16226/3‑251 (MQ=255) gCCAGCTTAACCAGTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCTCCATTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACAATCAAACGCTGTGCAAGTAGTAAATATGACAAGTTGATGTCATAAATGTGTTTCAGCAACTCGGAGGTTTGCATTATTCCCACCCAGAATAACCAACTGTATTTTTATGCGGTTTCCCCGCACCCCGTGATGTCGCCGGGAAGCCCCGGTa < 1:480500/251‑1 (MQ=255) gCTTAACCATTTGCGGAAGAGGCAGTGCCGCTAACGTTGTCGCCATTTCTTCC‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACAATCAAACGCTGTGCAAGTAGTAAATATGACAAGTTGATGTCATAAATGTGTTTCAGCAACTCGGAGGTATGCATTATTCCCACCCAGAATAACCAACTTTATTTTTATGCGGTTTCACCGCACCCCGTGATGTCGCCGGGAAGCCCCGGTaaaaa < 1:258058/251‑1 (MQ=255) tAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACAATCAAACGCTGTGCAAGTAGTAAATATGACAAGTTGATGTCATAAATGTGTTTCAGCAACTCGGAGGTATGCATTATTCCCACCCAGAATAACCAACTTTATTTTTATGCGGTTTCACCGCGCCCCGTGATGTCGCCGGGAAGCCCCGGTaaaaaa < 1:382260/249‑1 (MQ=255) ggAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACAATCAAACGCTGTGCAAGTAGTAAATATGACAAGTTGATGTCATAAATGTGTTTCAGCAACTCGGAGGTATGCATTATTCCCACCCAGAATAACCAACTTTATTTTTATGCGGTTTCACCGCACCCCGTGATGTCGCCGGGAAGCCCCGGTAAAAAATAATTAGCAtt > 1:691103/1‑249 (MQ=255) gCCGCTAACGTTGTCGCCATTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACAATCAAACGCTGTGCAAGTAGTAAATATGACAAGTTGATGTCATAAATGTGTTTCAGCAACTCGGAGGTATGCATTATTCCCACCCAGAATAACCAACTTTATTTTTATGCGGTTTCACCGCACCCCGTGATGTCGCCGGGAAGCCCCGGTAAAAAATAATTAGCATTAGAATAGTTGCGAt < 2:56690/251‑1 (MQ=255) gTCGCCATTTCTTCA‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTTAACAATCAAACGCTGTGCAAGTAGTAAATATGACAAGTTTATGTCATAAATGTGTTTCAGCAACTCGTAGGTATGCATTATTCCCACCCAGAATAACCAACTTTATTTTTATGCTGTTTCACCGCACCCCGTGATGTCGCCGTGAATCCCCTGTAAAAAATAATTAGCATTAGAATAGTTGCTATAATCTGCAATa < 2:319885/250‑1 (MQ=255) ttcttcA‑TTATATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACAATCAAACGCTGTGCAAGTAGTAAATATGACAAGTTGATGTCATAAATGTGTTTCAGCAACTCGGAGGTATGCATTATTCCCACCCAGAATAACCAACTTTATTTTTATGCGGTTTCACCGCACCCCGTGATGTCGCCGGGAAGCCCCGGTAAAAAATAATTAGCATTAGAATAGTTGCGATAAGCTGCAATAAGCAGAacc > 1:695490/1‑251 (MQ=255) | TTTTCACTCATGATCAGGCCCTTTTCTTGCGCAGCGCTTCTTCAGGCTGATTAACATCATTCAGCAAGCGTGTTGAGAGCATGATGCCGGTATGAATTTGCTGGAGATCGTCAACGCGGGAATCTTGCGTCAACTGAGTAATCGTCTGGTGGCTGTCAAAACGGAAGTGACAAACCAGTTGATTGGTTTCTGCCAGCTTAACCATTTGCGGAAGAGTCAGTGCCGCTAACGTTGTCGCCATTTCTTCA‑TT‑TATGCCGAGACGAAACATAGCGGACGCTTTGTCCTGAACAATCAAACGCTGTGCAAGTAGTAAATATGACAAGTTGATGTCATAAATGTGTTTCAGCAACTCGGAGGTATGCATTATTCCCACCCAGAATAACCAACTTTATTTTTATGCGGTTTCACCGCACCCCGTGATGTCGCCGGGAAGCCCCGGTAAAAAATAATTAGCATTAGAATAGTTGCGATAAGCTGCAATAAGCAGAACC > NC_000913/1977834‑1978324 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |