| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,061,935 | G→A | S46N (AGC→AAC) | torD → | trimethylamine‑N‑oxide reductase‑specific chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,061,935 | 0 | G | A | 91.8% | 192.8 / NA | 74 | S46N (AGC→AAC) | torD | trimethylamine‑N‑oxide reductase‑specific chaperone |
| Reads supporting (aligned to +/- strand): ref base G (1/0); major base A (39/28); minor base C (0/6); total (40/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.90e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGTGGAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGT‑TCCCGC‑GTCGCAGGTGAAA‑TCATGACCAC‑GCTGACAGCAC‑AACAGATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAGCGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCG > NC_000913/1061691‑1062179 | ggtggAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGT‑TCCCGC‑GTCGCAGGTGAAA‑TCATGACCAC‑GCTGACAGCAC‑AACAGATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCCCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGaa < 1:757019/249‑1 (MQ=255) gtggAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGT‑TCCCGC‑GTCGCAGGTGAAA‑TCATGACCAC‑GCTGACAGCAC‑AACAGATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAAcc‑g > 1:204647/1‑251 (MQ=255) ggtgAAATTGAGAAGGTCAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGT‑TCCCGC‑GTCGCAGGTGAAA‑TCATGACCAC‑GCTGACAGCAC‑AACAGATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAAcc‑g < 2:769904/248‑1 (MQ=255) ttGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGT‑TCCCGC‑GTCGCAGGTGAAA‑TCATGACCAC‑GCTGACAGCAC‑AACAGATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCCGATGGCTGAATGG‑ATTTCGTTG‑CTGGAAAACGAACc‑gccgcacc > 2:476809/1‑248 (MQ=255) aCAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGT‑TCCCGC‑GTCGCAGGTGAAA‑TCATGACCAC‑GCTGACAGCAC‑AACAGATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGcggcgg > 1:460054/1‑251 (MQ=255) aaCGGAACAGTGGAGCAGGTGACGACGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGT‑TCCCGC‑GTCGCAGGTGAAA‑TCATGACCAC‑GCTGACAGCAC‑AACAGATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAACAACGAACC‑GCCGCTCACTGCGGCGGTg > 1:755063/1‑251 (MQ=255) ggggAGAAGGTGAGGGCTTTTAGCGGCCCGGTGGGGATGGTGGGGCGGTGCGAATATGT‑TCCCGC‑GGCG‑AGGGGAAAATCAGGCCCAC‑GCTGACAGCAC‑AACAGATTGCCTTTTTTTCC‑GCC‑TGGCTAGCGCAGTTGTTCGCCCTTGAGTTGGACGATAACCAACTGACAAAAACCGCCAGTGCGCAGATGGCGGAATGT‑TTTTCGTTG‑CGGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTg < 1:683696/249‑1 (MQ=255) gggcatgTGAAGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGT‑TCCCGC‑GTCGCAGGTGAAA‑TCATGACCAC‑GCTGACAGCAA‑AACAGATTGCCTGTGTTTAC‑GCC‑TGGATAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGGACA‑CCCGCTCACCGCGGCGGGGAActggcgtgg > 2:130506/7‑242 (MQ=255) aGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGT‑TCCCGC‑GTCGCAGGTGAAA‑TCATGACCAC‑GCTGACAGCAC‑AACAGATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAAAAACTGACGAAAACCGCCAGTGCGCAGATGGCTGAAGGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAAAGAGCTGGaaa < 1:563833/251‑1 (MQ=255) ggaggggACGGCGTTTAAGGCCCCCGTGGAGGTGGTGGCGCAGGGCGAATATGT‑CCCCGC‑GTCGAAGGGAAAA‑TCATGCCCAG‑GCTGACAGCAC‑AACAGTTTGCCTGTGTTTAC‑GCC‑TGGCAAGCGCAGTTTTTCTCCCGTGGGCTGGACGAGGAACAACTGACGAAAATCCCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGaaaa < 1:619730/245‑1 (MQ=255) cAGGTGACGGCGGTTAACGGCCCCGTGGAGATGGTGGCGAGGTGCAAATATGT‑CCCCGC‑TGCCCAGGTGAAA‑TCATGACCAC‑TCTGACA‑CACCAACAGATTCCCTGT‑TTTACCGCC‑GGGCTGGCGCTTTTGTTCTCCCGGGGGCGGGACGATGAACAACTGAGGCAAAGCGCCAGTGCGCAGGTGGCTGAAGGG‑TTTCCTTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAAc < 1:513968/251‑1 (MQ=255) ggacgggtgttacgggcccgggggggaTGGTGGGGCAGTGCGAATATGT‑CCCCGC‑GTCGCAGGTGAAA‑GCATGCCCAC‑GCTGACAGCAC‑AACAGATTGCCGGTGTTGAC‑GCG‑TGGCTAGCGCAGTTGTTCTCCCGGGAGCTGGACGAGGACCAACTGCCGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTGG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTa < 2:51911/226‑1 (MQ=255) tttAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGT‑TCCCGC‑GTCGCAGGTGAAA‑TCATGACCAC‑GCTGACAGCAC‑AACAGATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGGGCTGGAAAACCGTATTGCCAcc > 1:372566/1‑250 (MQ=255) aCGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGT‑TCCCGC‑GTCGCAGGTGAAA‑TCATGACCAC‑GCTGACAGCAC‑AACAGATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGGACCAGCTGGAAAACCGTATTGCCACGCTgg > 2:144715/1‑250 (MQ=255) ggCCCCGTGGAGGTGGGGGCGCAGTGCGAATATGT‑TCCCGC‑GCCGCAGGTGAAA‑TCATGACCAC‑GCTGACAGCAC‑AACAGATTGCCTTTTTTTAC‑GCT‑GGGCTAGCGCAGTTGTTCTCCCGTGGGTGGGACGATAAACAACTGACGAAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACa < 1:62600/251‑1 (MQ=255) cGTGGAGATGGTGGCGCAGTGCGAATATGT‑TCCCGC‑GTCGCAGGTGAAA‑TCATGACCAC‑GCTGACAGCAC‑AACAGATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAAcc‑gccg > 1:114067/1‑198 (MQ=255) ggagggtgggccggggcgattttgtCCCGCCGTCGCGGGGGAAA‑TCATGCCCCC‑GCTGACAGCAA‑AAAAGGTTGCTTGTGTTACC‑GCC‑GGGCTGGGGCAGTTGTGCCCCCGGGAGATGGACGACGACCAACAGACAAAAACGGCCTGTCCGCGGATGGCGTAATG‑‑TTTTTGTTGGCTAAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGAc < 2:453358/226‑1 (MQ=255) tggtggCGCAGTGCGAATATGT‑TCCCGC‑GTCGCAGGTGAAA‑TCATGACCAC‑GCTGACAGCAC‑AACAGATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCATATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATg > 1:503330/1‑251 (MQ=255) gtggCGCAGTGCGAATATGT‑TCCCGC‑GTCGCAGGTGAAA‑TCATGACCAC‑GCTGACAGCAC‑AACAGACTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTATCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAGCGAACC‑GCCGCTCACTGCGGCGGTGAACGGGCTGGAAAAACGTATTTCCACGCTGACAGTACGGGACGATGcc > 2:364155/1‑251 (MQ=255) gggCGCAGGGCGAAT‑TGTGTCCCGC‑GTCGCAGGTGAAA‑TCAGGACCCC‑GCTGACAGCAC‑AACATAGTGCCTGTGTTTAC‑GCC‑TGGCTGGCGCAGTTGTTCCCCCGTGAGCTGGAGGATGAACAACTGACGCAAATCGCCGGGGCGCAGATGGTTGAATGG‑TTTTCGTTG‑CTAAAAAACAAGCC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGccc < 1:95180/250‑1 (MQ=255) gcAGTGCGAATATGT‑TCCCGC‑GTCGCAGGTGAAA‑TCATGACCAC‑GCTGACAGCAC‑AACAGATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTcc > 1:422628/1‑250 (MQ=255) gagggCGAATATGT‑CCCCGC‑GTCGGAGGGAAAA‑ACAT‑ACCACCGCGGAAAACAC‑AAAAGATTGCCTGGGTTT‑C‑GCCCGGGCTGGCGCTGTTGTCCCCCCGGGGGCGGGACGAGGAACAACTGACGAAAACCGCCAGGGCGCAGAGGGCGAAATGG‑TTTGCGTTG‑CTAAAAACCGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTg < 2:422628/247‑1 (MQ=255) atatGT‑TCCCGC‑GTCGCAGGTGAAA‑TCATGACCAC‑GCTGACAGCAC‑AACAGATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGc > 1:791850/1‑251 (MQ=255) atGT‑TCCCGC‑GTCGCAGGTGAAA‑TCATGACCAC‑GCTGACAGCAC‑AACAGATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGCAAACCCTATTGCCCCACAGCCAGTACGTGACGATGCCCGTCTGGAACCGGccc > 2:437385/1‑250 (MQ=255) c‑gTCGCGGGTGAAA‑TCATTCCCGC‑GCTGCCAGCAC‑AATAGATTGCTTGTGTTTCC‑GCC‑TGGCACGCGCTGTTGTTCTCCGGGGAGCTGGACGAGGAACAACTGACGAAAACCGCCAGGGCGCAGGTGGCTGAAGGG‑TTTTGGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACtttt < 2:372566/251‑1 (MQ=255) c‑gTCGCAGGTGAAA‑TCATGACCAC‑GCTGACAGCAC‑AACAGATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGGACGTGCTGGAAAACCGGATTGCCCCGCTTAACGTACGTGAAGCGGCCCGTCTTGAACCGGGCGCGGGCtttt > 2:669449/1‑251 (MQ=255) gTCGCAGGTGAAA‑TCATGACCAC‑GCTGACAGCAC‑AACAGATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTg > 1:42561/1‑251 (MQ=255) tGACAGCAC‑AACAGATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGacaa > 1:828951/1‑250 (MQ=255) gACAGCAC‑AACAGATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGGTTCTGATGGCCGacaaa > 1:43089/1‑250 (MQ=255) gACAGCAC‑AACAGATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGGGGACGGGGGGGAAAACAGGCTTGCCACGCTGACCGTACGAGAAGAAGACCGTCTGGAACTGGCCGCGGGCTTTTTCGACCTGTTTCtgattaactgcaaa > 2:737405/1‑240 (MQ=255) gCAC‑AACAGATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGTCAAACAAgc > 1:659974/1‑251 (MQ=255) agcacaaaagttggctggtgtTTAC‑GCC‑GGGCTAGCGCAGTGTTTCTCCCGTGAGTGGGACGATGAACAACTGCCGCAAATCGCCGGGGCGCAGAGGGCGGAAGGT‑TTTTCGTGG‑CAGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAg < 1:437385/234‑1 (MQ=255) cac‑aACAGATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAgcg > 1:192695/1‑251 (MQ=255) cac‑aACAGATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGATGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGGGAACGAGCTGGCAAACCCGATTGCCACCCTGACCGTACGTGCCGCAGCCCGTCTGGACCCGGCCGCGGACTTTTTTGGCCTGtttttgtataccgccaaacacacc > 2:351873/1‑230 (MQ=255) cac‑aACAGATTGCATGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGACCC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGCAAACCGTATTGCCACGCTGACAGTACGTGAAGATGCCCGACTGGAACTGGCCGCGGGCTTTTGCGGCCTGTTTCTGATGACCGACAAACATgcg > 1:451029/1‑251 (MQ=255) caaaacaGATTGCTTGTGTTTAC‑GCC‑GGGCTAGCGCATTTTTTCCCCCGTGGGCTGGACGATGAACAACTGACGCAAACCGCAAGTGCGAAGATGGCTGAATGG‑TTTTCGTTG‑CTAAAAAACAAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGGAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAgcg < 1:408022/248‑1 (MQ=255) ac‑aacaGATTGCCTGTGTTTCC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGAGGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTGG‑CTAAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAgcgg < 1:36753/251‑1 (MQ=255) caGATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTTTTCCCCCGTGAGCGGGACGATAAACAACTGAGGCAAATCGCCAGTGCGCAGAGGGCTGAATGG‑TTTTCGTTG‑CTAAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCt < 1:197779/251‑1 (MQ=255) agtgttgtgtgtgTTTAC‑GCT‑GGGATAGCGAAGTTGTCCTCCGGGGAGCTGGGGGATGAAAAAGTGACACAAATCGCAGGGGGGGAGATGGAGGATGGG‑TTTGCTTGG‑CAGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCt < 2:175726/242‑1 (MQ=255) aGATTGCTTGTGTTTGC‑GCC‑GGGCTACAGTAGTGGTTCTCCGTTGATGTGGCAGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGTTGAATGT‑TTTTGGTTG‑CTGAAAACCGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTg < 1:638000/251‑1 (MQ=255) gATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGCTGACCGACAAAACAGCGGCGCTGc > 1:797964/1‑251 (MQ=255) gATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGc > 1:778142/1‑251 (MQ=255) ttcattgtgTTTAC‑GCC‑TGTCTAGCGCGGGTGGTCACCGGTGAGTGGGACGAGGAAAAACTGACGAAAACCGCCAGGGCGAAG‑TGGGTGGATGGGTTTTCGTGG‑TAGAAAAACAAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACTATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGcc < 1:105336/245‑1 (MQ=255) ccTGTGTTCAC‑CCC‑TGGCTAGCGCAGTTTTTCTCCCGGGAGCGGGACGAGGAAAAACTGACGCAAATCGCCAGTGCGAAGAGGGCTGAATGG‑TTTTCGTTG‑CTGAAAACCGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTAt < 1:805213/251‑1 (MQ=255) tttcgcccc‑TGGCGAGCGCATTTTTTCCCCCGGGGGCGGGACGATAAAAAACTGACACAAACCGCCAGTGCGCGGAGGGCTGAATGG‑TTTTCGTTG‑CTAAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCAt < 2:265336/243‑1 (MQ=255) tttAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCAt > 1:265336/1‑249 (MQ=255) tttAC‑GCC‑GGGCTAGCGCATTTGTTCCCCCGTGGGTTGGACGATGAACAACTGACGAAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATc < 1:476809/250‑1 (MQ=255) c‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGGAAACCAGATTTCCCCGCCGACAGTACGTGACGATGCCCGTCTTGAACTCGCCGCGGACTTTTTCGGCCCGGTTCTTATGACCGCCAAACAAGCGGGGCCGCCGTATTCATCGGccc > 2:44276/1‑250 (MQ=255) gCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGCACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACCGTACGTGGCGATGCCCGTCTGGAACTGGCCGCGGGCCTTTGCGGCCTGGTTTTGATGACCGCCAAACCAGACGCGCTGCCGTATGCCTCGGcccc > 2:334145/1‑249 (MQ=255) tGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAAACGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACa > 1:340161/1‑250 (MQ=255) ggCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTAAGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGAACGACAAACAAGCGGCGCTGCCGTATGCATCCGCCTACaa > 1:697246/1‑250 (MQ=255) gttCCCCCGTGAGCGGGAGGAAGAACAACTGACGCAAAGCCCCAGTGCGCAGAGGGCTAAAGGG‑TTTTCTTTG‑CTAAAAAACTAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAag < 1:591513/251‑1 (MQ=255) cGTGATCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGTTGAATGT‑TTTTCTTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTGTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTaa < 1:819882/251‑1 (MQ=255) cGTGAGCTGGACGATGAACAACTGACGCCAAACGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGGTTCTGATGACCGACAAACAAGCGGCGCTGCCGCATGCAACGGCCTAAAACCAGGACGAGCAAGAGAttt > 1:735999/1‑249 (MQ=255) gCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGGCTTTTGCGGCCTGTTTCTGATGACCGCCAAACAAGCGGCGCTGCCGTTTGCCTCGGCCTCCAAACAGGGCGAGCAAGAGATTAAACGCt > 2:194309/1‑251 (MQ=255) cTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACAAGCTGGAAAACCGTATTGCCACGCCGACACGACGAGACGCTGCCCGTCAGGAACAGGCCGCGGGCTTTTGCCGCCTGTTTATGGTGGCCGTCCAACAAAAGGGGCTGCCGGATGCATCCGCCTTCCCACAGGACGAggaaacgaataaccacct > 2:449298/1‑234 (MQ=255) aCGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTTCCCCGCTGACAGGACGTGACGATGCCCGGCTGGAACTGGCCCCGGACTTTTGCGGGCTGGTTCTGGTGACCGACAAAAAAGCGGCGCTGCCGTATGCAACGGCCTACAAACAGGACGAGCAAGGGGTTAAACggctgttt > 2:149741/1‑244 (MQ=255) aCGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTACGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTTCCACGCTGACAGTACGTGACGATGCCCGTCTGGGACTGGCCGCGGACTTTTGCGGCCTGTTTTTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGCCCTCCAAACAGGACGAGCAAGGGATTAAACGCCTGtt > 2:371856/1‑250 (MQ=255) gcaaatcgctgttGCGCATAGGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATgg < 1:130506/239‑1 (MQ=255) ccAGTGCGCAGATGGCTGAGTGT‑TTTTCGTTG‑CAAAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAga < 1:44276/251‑2 (MQ=255) gggTGCGCGGTTGGGTGAATGG‑TTTTGGTTG‑‑AGAAAAACCAACCCGCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCg < 2:429257/249‑1 (MQ=255) agggcgcAGAGGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCgg < 1:82813/248‑1 (MQ=255) gTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACA‑GCCGCTCACTGCGGCGGTGAACGGGCTGGAAAAACGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGACGTATGCACCGGCCCACAAACAGGACGAGCAAGGGATTAAAAACTTGTTAGTTGAGGCAGGGATGGCAACCAGAGGc > 1:199925/1‑251 (MQ=255) gtcgcAGATGGCTGATTGT‑TTTTGTTTG‑CTAAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCa < 1:632343/249‑1 (MQ=255) ccaggaggggggaagtg‑TTTGCGTTG‑CAAAAAACCGAACC‑GCCGCTCTCTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGAGGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACTAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAAt < 2:791850/235‑1 (MQ=255) gATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATAGGCCTACAAACAAGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTc > 1:725119/1‑250 (MQ=255) ggtgacttagtgtttttgtttG‑CTGAAAACAGAACC‑GCCTCTCATTGCGGCGGTGAACGAGCTCGAAAACCGTAGTGCCACTATTACAGTACGTGACGATGCCCGTCTGGAACCGGCCGCGGACTTTTGCTGCCTTGTTCTGATGACCGACAATCAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATCAAACGCTTGTTAGTTGAGGCAGGGATGGAACCCAGCGGCAATTTCa < 2:636687/232‑1 (MQ=255) gtctcttccgttcatcaaaaaaACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAAcc < 1:817671/233‑1 (MQ=255) aTGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCCAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACTAACCgg > 1:407181/1‑251 (MQ=255) tGG‑TTTTCGTTG‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGAAGGTGCCCGTGTGGAACTTGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGAGGCGGTGCCGTAAGCATCGGCCTACAAACAGGAAGAGGAAGGGATTAAAAGCTTGTTAGTTTAGGCAGGGATGGAAAACAACGGGAATTTCCACGAACCGGc > 1:605120/1‑251 (MQ=255) ag‑CTGAAAAACGTACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCt < 2:204647/249‑1 (MQ=255) g‑CTGAAAAACGAACC‑GCCGCTCACTGCGGCGGGGAACGAGATGGAAAAACGGATTTCCACCCTGCAAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGGCTTTTGCGGCCTGTTTCTGATAACCGACAAACAAGCGGCGCTGCCGGATGCATCGGCCTACAAACAGGACGGGCAAAAAATTCAACGCTTGTTAGTTTAGGCAGGGTTGGGAACCAGCGGCAAtttataagaaccaaatcgggccagcg > 2:817671/1‑228 (MQ=255) tGAAAAACGAACC‑GCCGCTCACTGCGTCGGTGAACGAGCTGGAAAACCGTATTGCCGCGCTGACAGTACGTGACGTTGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCCTCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGAGGGAAAGCAGCGGCACTTTCAAAGAACCGGCAGACCATCTGGCg > 1:516449/1‑251 (MQ=255) aaaaaaCCGACCC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCg < 2:503330/249‑1 (MQ=255) | GGTGGAAATTGAGAAGTACAACGGAACAGTGGAGCAGGTGACGGCGTTTAACGGCCCCGTGGAGATGGTGGCGCAGTGCGAATATGT‑TCCCGC‑GTCGCAGGTGAAA‑TCATGACCAC‑GCTGACAGCAC‑AACAGATTGCCTGTGTTTAC‑GCC‑TGGCTAGCGCAGTTGTTCTCCCGTGAGCTGGACGATGAACAACTGACGCAAATCGCCAGTGCGCAGATGGCTGAATGG‑TTTTCGTTG‑CTGAAAAGCGAACC‑GCCGCTCACTGCGGCGGTGAACGAGCTGGAAAACCGTATTGCCACGCTGACAGTACGTGACGATGCCCGTCTGGAACTGGCCGCGGACTTTTGCGGCCTGTTTCTGATGACCGACAAACAAGCGGCGCTGCCGTATGCATCGGCCTACAAACAGGACGAGCAAGAGATTAAACGCTTGTTAGTTGAGGCAGGGATGGAAACCAGCGGCAATTTCAACGAACCGGCAGATCATCTGGCG > NC_000913/1061691‑1062179 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |