| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,780,060 | G→A | H889H (CAC→CAT) | ypjA ← | adhesin‑like autotransporter YpjA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,780,060 | 0 | G | A | 96.0% | 192.0 / ‑3.3 | 76 | H889H (CAC→CAT) | ypjA | adhesin‑like autotransporter YpjA |
| Reads supporting (aligned to +/- strand): ref base G (3/0); new base A (40/31); total (45/31) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.60e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01 | |||||||||||
GACCTGGAGATCTTCTGCCCGGGCCAGAGCCTGAAACTCATCTTTTGACCGCCCAAGGGTATATTGCCCGCCAGAGTTAACCTTTGTG‑GCGGAGTCCTGACCCAGGTTTTGCATTGCCCCACCCTTGCCAACCGTGGAGTCGCG‑AGCTTCGGTACCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑GTGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAAACTGTTTGTATTCCGCCGTCGTTAATTGTTGTCTCATTCGCCACACCCTCGACAATTTGTTCACCGCCGGTGAGCGTCGTGCCTGTCGCAGT > NC_000913/2779823‑2780302 | gACCTGGAGATCTTCTGCCCGGGCCAGAGCCTGAAACTCATCTTTTGACCGCCCAAGGGTATATTGCCCGCCAGAGTTAACCTTTGTG‑GCGGAGTCCTGACCCAGGTTTTGCATTGCCCCACCCTTGCCAACCGTGGAGTCGCG‑AGCTTCGGTACCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTg > 1:802266/1‑250 (MQ=255)gACCTGGAGATCTTCTGCCCGGGCCAGAGCCTGAAACTCATCTTTTGACCGCCCAAGGGTATATTGCCCGCCAGAGTTAACCTTTGTG‑GCGGAGTCCTGACCCAGGTTTTGCATTGACCCACCCTTTCCCACCGTGGAGTCGCG‑AGCTTCGGTACCTGCTAATACCAATAAATTACCGCCCTTTTCCAGCACCCTATTGGTCGCTAAATTTCCGGAAATGGCAAAAGAACCTTACTG‑ATGAGTACCGCtcg > 2:48195/1‑249 (MQ=255) tcttctGCCCGGGCCAGAGCCTGAAACTCATCTTTTGACCGCCCAAGGGTATATTGCCCGCCAGAGTTAACCTTTGTG‑GCGGAGTCCTGACCCAGGTTTTGCCTTGCCCCCCCCTTTCCAACCGTGGCGTCGCC‑AGCTTCGGTACCTGCCAATACCAATAAATTACCGCCATTTTCCAGCCACATCTTGGTCGCTAAATTGCCGGAAATGGACAAAGTACCCTCCTGCGT‑AGAACCGCTGATTTCAATAcc > 2:67361/1‑251 (MQ=255) cttctGCCCGGGCCAGAGCCTGAAACTCATCTTTTGACCGCCCAAGGGTATATTGCCCGCCAGAGTTAACCTTTGTG‑GCGGAGTCCTGACCCAGGTTTTGCATTGCCCCACCCTTGCCAACCGTGGAGTCGAG‑AGCTTCGGTACCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCGGATTTCAATACCg > 1:84072/1‑251 (MQ=255) tGACCGCCCAAGGGTATATTGCCCGCCAGAGTTAACCTTTGTG‑GCGGAGTCCTGACCCAGGTTTTGCATTGCCCCACCCTTGCCAACCGTGGAGTCGCG‑AGCTTCGGTACCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGt > 1:212838/1‑251 (MQ=255) gACCGCCCAAGGGTATATTGCCCGCCAGAGTTAACCTTTGTG‑GCGGCGCCCTGACCCAGGATTTGCAATGCCCCACCCTTGCCAACCGGGGAGTCGCG‑AGCTTCGGTACCTGCTAATACCAATAAATTACCGCCCTTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGAACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTCGCCGTGCTCGTCGGGGGAGCG‑GCCCCGCCGtt > 2:733944/1‑251 (MQ=255) cAAGGGTATATTGCCCGCCAGAGTTAACCTTTGTG‑GCGGAGTCCTGACCCAGGTTTTGCATTGCCCCACCCTTGCCAACCGTGGAGTCGCG‑AGCTTCGGTACCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACCTATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACg > 2:316490/1‑251 (MQ=255) cAAGGGTATATTGCCCGCCAGAGTTAACCTTTGTG‑GCGGAGTCCTGACCCAGGTTTTGCATTGCCCCACCCTTGCCAACCGTGGAGTCGCG‑AGCTTCGGTACCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACg > 1:261320/1‑251 (MQ=255) aaGGGTATATTGCCCGCCAGAGTTAACCTTTGTG‑GCGGAGTCCTGACCCAGGTTTTGCATTGCCCCACCCTTGCCAACCGTGGAGTCGCG‑CGCTTCGGTACCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACg > 1:528029/1‑250 (MQ=255) aaGGGAATATTGCCCGCCAGAGTTAACCTTTGTG‑GCGGAGTCCTGACCCAGGTTTTGCATTGCCCCACCCTTGCCAACCGTGGAGTCACG‑AGCTTCGGTACCTGCTAAAACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTCAATTGCCGGAAATGGAAAAAGTACCATACTG‑ATGAGTACCGCTGATTTCAATACCGTTAACCGTGGTCGTCTTGAGTGAG‑GCACCGCGGTTCTGGAc > 2:247941/1‑249 (MQ=255) gggTATATTGCCCGCCAGAGTGACCCTTTGTG‑GCGGAGTCCTGACCCGGGTTTTGCATTGCCCCACCCTTGCCAGCCGTGGAGTCGTG‑AGCTGCGGTCCCTGCTAATACAAAAAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGata < 1:650525/251‑1 (MQ=255) atatTGCCCGCCAGAGTTAACCTTTGTG‑GCGGAGTCCTGACCCAGGTTTTGCATTGCCCCACCCTTGCCAACCGGGGGGTCGCG‑AGCTTCGGTACCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACAGATTGGTAGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑CTGAGTACCGCTGATTTCAATACCGTTAGCCGTACTCGTCTGGAGAGCG‑GGCCCCTTGTTCTGGACGTTATcat > 2:229824/1‑249 (MQ=255) ttGCCCGCCAGAGTTAACCTTTGTG‑GCGGAGTCCTGACCCCGGTTTTGCATTGCCCCACCCTTGCCAACCGTGGGGTCGCG‑AGCTTCGGTACCTGCTAATACCAATAAATTACCGCCATTTTTCCGAAACATATTGGTCGCTAAATTGCCGGAAATGGTAAAAGTACCGTACTG‑GTGAGTACCGCTGATTTCAAt > 2:1216/1‑195 (MQ=255) ttGCCCGCCAATGTTAACCTTTGTG‑GCGGAGTCCTGCCCCAGGTTTTGCATTCCCCCCCCCTTGCCAACCGTGGAGTCGCG‑AGCTTCGGTCCCTGCTAATCCCAATAAAGTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTc < 1:824271/250‑1 (MQ=255) ccGCCAGAGTTAACCTTTGTG‑GCGGAGTCCTGCCCCAGGTTTTGCATTGCCCCACCCTTGCCAACCGGGGAGTCGCG‑AGTTTCGGTACCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCttt < 1:612624/251‑1 (MQ=255) ccGCCAGAGTTAACCTTTGTG‑GCGGAGTCCTGACCCAGGTTTTGCATTGCCCCACCCTTGCCAACCGTGGAGTCGCG‑AGCTTCGGTACCTGCTAATACCAATAAATTAACGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTCATG‑ATTGGGACCACTGATTTCACTACCCTTAGCCGTGCTCCTCTGGAGA‑CGCGCACCGCTGTTCTGGACGATATCTGTCGCttt > 2:28485/1‑251 (MQ=255) gCCAGAGTTAACTTTTGTG‑GCGGAGTCCTGACCCAGGTTTTGCATTGCCCCACCCTTGCCAACCGTGGAGTCGCG‑AGCTTCGGTACCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACCAATTGGTCGCTAAATTGCCGGAAATGGAAAAAGGACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCTCTTTGc > 1:655321/1‑251 (MQ=255) gCCAGAGTTAACCTTTGTG‑GCGGAGTCCTGACCCAGGTTTTGCATTGCCCCACCCTTGCCAACCGTGGAGTCGCG‑CGCTTCGGTACCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGc > 1:332695/1‑251 (MQ=255) ccAGAGTTACCCTTT‑TGTGCGGAGGCCTGCCCTGGGTTTTGCCTTCCCCCCCCCGTGCCAACCGGGGTGGCGCG‑AGCTTAGGTTCCTATAAAAAACAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCTCTTTGcc < 2:858581/251‑1 (MQ=255) cAGAGTTAAACTTTGTG‑GCGGAGTCCTGACCCAGGGTTTGCATTGCCCCACACTAGACAAACGTGGAGTCGCG‑AGCTTCGGAACCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATAACGTTAGCCGAGCTCGTCTGTAGCGAG‑GCACCGCTGGTCTGGACGATATCTTACGCTTTGcc > 1:775312/1‑250 (MQ=255) gagTTACCCTTTGGG‑GCGGAGTCCTGACCCAGGTTTTGCATTGCCCCCCCCTTGCCAACCGTGGAGCCGCG‑AGCTTCGGTACCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCAtt < 1:273206/251‑1 (MQ=255) gagTTAACCTTTGTG‑GCGGAGTCCTGACCCAGGTTTTGCATTGCCCCACCCTTGCCCACCGTGGAGTCGCG‑AGCTTCGGGACCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACATATTGGCCGCTAAATTGCCGGTAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGCTTTCAATACAGTTAGCCGTGCTCGTCTGGAGGGCG‑GCACCGATGTTCTGGAAGATATCTGTCGCTTTGCCAtt > 2:782771/1‑251 (MQ=255) tAACCTTTGTG‑GCGGAGTCCTGACCCAGGTTTTGCATTGCCCCACCCTTGCCCACCGTGGCGTCGCG‑AGCTTCGGTACCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCCCCGCTGATCTGGGCGATATCTGTCGATTTGCCATTCTCg > 2:284227/1‑251 (MQ=255) tAACCTTTGTG‑GCGGAGTCCTGACCCAGGTTTTGCATTGCCCCACCCTTGCCAACCGTGGAGTCGCG‑AGCTTCGGTACCTGCTAATACCAATAAATTAACGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCg > 1:116573/1‑251 (MQ=255) cccTTTTTG‑GCGGAGTCCTGACCCAGGTTTTGCATTGCCCCCCCCTTGCCAACCGTGGAGTCGCG‑AGCTTCGGTCCCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGtt < 1:768156/250‑1 (MQ=255) tgtg‑GCGGAGGCCTGCTCCAGGTTTTGCCTTGCCCACCCCTTGCCACCCGTGGAGTCGCG‑AGCCTCGGTACCTGCTAATCCCAATAAATTGCCGCCATTTTCCAGCAACCTATGGGCCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTTATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGATGATATCTGTCGCTTTGCCATTATCGTTGACt < 1:161781/250‑1 (MQ=255) g‑gCGGAGTCCGGCCCCAGGTTTTGCATTGCCCCACCCTTGCCAACCGTGGAGTCGCG‑AGCTCCGGTACCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACAGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATATGTCGCTTTGCCATTATCGTTGACTGTCa < 1:458556/251‑1 (MQ=255) gCGGATTCCTGCCCCAGGTTTTGCATTGCCCCCCCCTTGCCAACCGTGGAGTCGCG‑AGTTTCGGTACCTGCTAATCCCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAg < 1:408955/251‑1 (MQ=255) cctaccccAGGTTTTGCTTTGCCCCCCCCTGCCCAACGGGGGTG‑CGCGGAGCTTCGGTCCCTGCTAAACCCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTGCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTAcc < 2:318885/245‑1 (MQ=255) tGACCCAGGTTTTGCATTGCCCCACCCTTGCCAACCGTGGAGTCGCG‑AGCTTCGGTACCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGCCGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGcc > 1:224134/1‑251 (MQ=255) ccccAGGTTTTGCATTGCCCCACCCTTGCCAACCGTGGAGTCGCG‑AGCTTCGGTCCCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCtt < 1:153335/250‑1 (MQ=255) cAGGTTTTGCATTGCCCCACCCTTGCCAACCGTGGAGTCGCG‑CGCTTCGGTACCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGGGCG‑GCCCCGCAGTTCTGGACGATATCTGTCGCGTTGCCATTATCGTTGACTGTCGGCGTACCCCCTTCAt > 2:564488/1‑251 (MQ=255) gTTTTGCATTGCCCCACCCTTGCCAACCGTGGAGTCGCG‑AGCTTCGGTACCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTc > 1:529552/1‑246 (MQ=255) gTTTTGCATTCCCCCCCCCTTGCAAACCGGGGGGGCGCG‑GCCTTCGTTCCTTGTTAATCCAAAAAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTc < 2:529552/246‑1 (MQ=255) ttttGCATTGCCCCAACCTTGCCAACCGTGGAGTCCCG‑AGCTTCGGTACCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑GTGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGAt > 1:184731/1‑251 (MQ=255) tttGCATTGCCCCACCCTCCCCAACGGTGGAGCCGCG‑AGTTTCGGTACCTTCTAATCCCAATAAATGACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGACTTCATTGAt < 1:302101/250‑1 (MQ=255) ttGCATTGCCCCACCCTTGCCAACCGTGGAGTCGCG‑AGCTTCGGTACCTGCTAATACCAATAAATTACCGACATTTTCCATCCACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑CTGATTACCGCTGATTTCCATACCGTTAGCCGTGCTCGTCTGGAGTGCG‑GCAACGCTGATCTGGACGATATCTGTCGCTTTGCCCTTATCTTTGACTGTCCGCGGCCCGCCTTCCTTGATCt > 2:253829/1‑251 (MQ=255) ccccACCCTTGCCAACCGTGGAGTCGCG‑AGCTTCGGTACCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑Gttttt > 1:375513/1‑251 (MQ=255) cccACCCTTGCCAACCATGGAGTCGCG‑AGCTTCGGTCCCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGTAAATGGAAAAAGTACCGTAATA‑ATGAGTACCGCTGATTTCAATACCGTTAGCCTGGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGCCTGTAACTGTCGCTTTGCCATTATCGTTGACTGTAAGCGGACCGCCTTCATTGAGCTTTTGtttt > 2:692296/1‑250 (MQ=255) ccTTGCCAACCGTGGAGTCGCG‑AGCTTCGGTACCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGcc > 1:240391/1‑251 (MQ=255) tGCCAACCGTGGAGTCGCG‑AGTTGCGGTACCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCct < 1:493116/249‑1 (MQ=255) ggggccgcg‑AGCTCCGGTACCTGTTAATACCAAAAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTg < 1:794912/246‑1 (MQ=255) ggggtcgctagtgtcggctccTGCTAATACCAACAATTCCCCGCCATTTTCCAGCAACATATTGGGCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGGACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTg < 2:460619/232‑1 (MQ=255) cTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATCGCCGGAAATGGAAAAAGTACCGTACTG‑ATACGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAAACTGTTTGTATTccgccg > 1:833022/1‑251 (MQ=255) gCTAATCCCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTcc < 1:422117/221‑1 (MQ=255) gCTAATACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTcc > 2:422117/1‑221 (MQ=255) aTACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCCTTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAAACTGTTTGTATTCCGCCGTCGtt > 2:185660/1‑250 (MQ=255) aCCAATAAATTCCCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGATCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAAACTGTTTGTATTCCGCCGTCGTTAAt < 1:760217/251‑1 (MQ=255) aCCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCCTTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAACCTGTTTGTATTCCGCCGTCGTTAAt > 2:213081/1‑251 (MQ=255) ccAATAAATTCCCGCCATTTTCCAGCAACCTATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTCACTGTCAGCGTACCGCCTTCCTTGATCTTT‑GTTTTTTTTGACTCCACGTTAGCTGATACTATTTTTATTCCGCCATCGTTAAtt > 2:157937/1‑251 (MQ=255) aaaaaaTTACCGCCATTTTCCAACAATATATTTGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTCCCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAAACTGTTTGTATTCCGCCGTCGTTAAttgt < 2:228255/248‑1 (MQ=255) aTAAATTTCCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAAACTGTTTGTATTCCGCCGTCGTTAAttgtt < 1:599937/251‑1 (MQ=255) aaaTTACCGCCATTTTCCATCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCTCCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGGAACTGTTTGTATTCCGCCGTCGTTAATtgttgt < 2:333810/251‑1 (MQ=255) aaaTTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAAACTGTTTGTATTCCGCCGTCGTTAATtgttgt < 1:644936/251‑1 (MQ=255) ccGCCATTTTTCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCTTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAAACTGTTTGTATTCCGCCGTCGTTAATTGTTGTCTCAtt < 2:391052/251‑1 (MQ=255) cGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAAACTGTTTGTATTCCGCCGTCGTTAATTGTTGTCTCATTc > 1:212120/1‑251 (MQ=255) attttccagcactagatggttCGCTTAATTGCCGGAAATGGAAAAAGTACCTTATTG‑ATGAGTCCCGCTGAGTTCAATACCTTTAGCCTTGCTCGTCTGGAGAGCG‑TCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTGGACTGTCAGTGTACCGCCTTCATTGATCGTT‑TTTTTTATTGCCTCTCCGTTAGCTGAAACTGTTTGTATTCCGCCGTCGTTAATTGTTGTCTCATTCGCca < 2:475591/231‑1 (MQ=255) aTTTGCCAGCAACATATTGGTCGCTAAATTGCTGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCTCCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAAACGGTTTGTATTCCGCCGTCGTTAATTGTTGGCTCATTCGCca < 2:240391/251‑1 (MQ=255) ttttCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAAACTGTTTGTATTCCGCCGTCGTTAATTGTTGTCTCATTCGCcac > 2:108090/1‑251 (MQ=255) ccAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAACCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCATCGTACCGCTTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAAACTGTTTGTATTCCGCCGTCGTTAATTGTTGTCTCATTCGACACAccc > 1:863804/1‑251 (MQ=255) cAACATTTTGGTCGCTAAATTGCCGGAATTGGAAACAGTACCGTACTG‑ATGAGTACCGCTTATTTCAATCCCGTTAGCCGTGCTCGTCTGGATAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAAACTGTTTGTATTCCGCCGTCGTTAATTGTTGTCTCATTCGCCACACCCTCGa < 2:261320/251‑1 (MQ=255) aaCATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGCAACTGTTTGTATTCCGCCGTCGTTAATTGTTGTCTCATTCGCCACACCCTCGAc > 1:749219/1‑251 (MQ=255) gCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAAACTGTTTGTATTCCGCCGTCGTTAATTGTTGTCTCATTCGCCACACCCTCGACAATTTGTTCAcc > 1:843430/1‑251 (MQ=255) ccgaaagtGCCGAAAATTGAAAAAGTACCGTACTG‑ATGAGGACCGCTGAGTTCAATACCGTTATCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAAACTGTTTGTATTCCGCCGTCGTTAATTGTTGTCTCATTCGCCACACCCTCGACAATTTGTTCAcc < 2:166820/244‑1 (MQ=255) cTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAACCTGTTTGTATTCCGCCGTCGTTAATTGTTGTCGCATTCGCCACACACTCGACAATTTATTCAccg > 2:607856/1‑251 (MQ=255) aaaTTGCCGGAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAAACTGTTTGTATTCCGCCGTCGTGAATTGTTGTCTCAGTCGCCACACCCTCGACAATTTGTTCAccgcc < 1:229824/251‑1 (MQ=255) caggAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAAACTGTTTGTATTCCGCCGTCGTTAATTGTTGTCTCATTCGCCACACCCTCGACCATTTGTTCACCGCCGGTgcg > 2:478851/3‑249 (MQ=255) ggAAATGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGAG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAAACTGTTTGTATTCCGCCGTCGTTAATTGTTGTCTCATTCGCCACACCCTCGACAATTTGTTCACCGCCGGTGAGcg > 1:33974/1‑251 (MQ=255) aaaTGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAAACTGTTTGTATTCCGCCGTCGTTAATTGTTGTCTCATTCGCCACACCCTCGACAATTTGTTCACCGCCGGTGAGcgtc > 1:447744/1‑251 (MQ=255) aaTGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAAACTGTTTGTATTCCGCCGTCGTTAATTGTTGTCTCATTCGCCACACCCTCGACAATTTGTTCACCGCCGGTGAGcgtcg > 1:146737/1‑251 (MQ=255) aTGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGCAACTGTTTg > 2:287111/1‑179 (MQ=255) aTGGAAAAAGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAAACTGTTTg < 1:287111/179‑1 (MQ=255) aaaaaGTACCGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAAACTGTTTGTATTCCGCCGTCGTTAATTGTTGTCTCATTCGCCACACCCTCGACAATTTGTTCACCGCCGGTGAGCGTCGTGCCt > 1:277867/1‑251 (MQ=255) aaGTACCGTACTG‑ATGGGTCCCGCTGATTTCAAGCCCGTTAGCCGGGCTCGTCTGGAGAGCG‑CCCCCGCTGTTCTGGACGATATCTGCCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAAACTGTTTGTATTCCGCCGTCTTTAATTGTTGTCTCATTCGCCACCCCCTCGACAATTTGTTCACCGCCGGTGAGCGTCGTGCCTGTc < 1:316490/251‑1 (MQ=255) aaGTACCGTACTG‑ATGATTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGGGCG‑GCACCGCTGTTCTGGACGATATCTGTCGTTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAAACTGTTTGTATTCCGCCGTCGTTAATTGTTGTCTCATTCGCCACCCCCTCGACAATTTGTTCACCGCCGGTGAGCGTCGTGCCTGTc < 1:108090/251‑1 (MQ=255) ccGTACTG‑ATGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAAACTGTTTGTATTCCGCCGTCGTTAATTGTTGTCTCATTCGCCACACCCTCGACAATTTGTTCACCGCCGGTGAGCGTCGTGCCTGTCGCAGt > 1:230757/1‑251 (MQ=255) | GACCTGGAGATCTTCTGCCCGGGCCAGAGCCTGAAACTCATCTTTTGACCGCCCAAGGGTATATTGCCCGCCAGAGTTAACCTTTGTG‑GCGGAGTCCTGACCCAGGTTTTGCATTGCCCCACCCTTGCCAACCGTGGAGTCGCG‑AGCTTCGGTACCTGCTAATACCAATAAATTACCGCCATTTTCCAGCAACATATTGGTCGCTAAATTGCCGGAAATGGAAAAAGTACCGTACTG‑GTGAGTACCGCTGATTTCAATACCGTTAGCCGTGCTCGTCTGGAGAGCG‑GCACCGCTGTTCTGGACGATATCTGTCGCTTTGCCATTATCGTTGACTGTCAGCGTACCGCCTTCATTGATCTTT‑GTTTTTATTGCCTCTCCGTTAGCTGAAACTGTTTGTATTCCGCCGTCGTTAATTGTTGTCTCATTCGCCACACCCTCGACAATTTGTTCACCGCCGGTGAGCGTCGTGCCTGTCGCAGT > NC_000913/2779823‑2780302 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |