New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1979271 =	1 (0.010)	50 (0.620)	47/490	0.7	98.0%	intergenic (‑56/‑482)	insA5/uspC	IS1 family protein InsA/universal stress protein C
	?	NC_000913	= 2102947	NA (NA)					pseudogene (443/446 nt)	wbbL	interrupted rhamnosyltransferase WbbL

TCCAGCGGATAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACA‑TATTTAATATATGTCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACA  >  NC_000913/2102703‑2103174                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                     tCCAGCGGATAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCt                                                                                                                                                                                                                                 <  1:41490/250‑1 (MQ=31) tCCAGCGGATAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCt                                                                                                                                                                                                                                 <  1:63340/250‑1 (MQ=31)    aGCGGATAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACa                                                                                                                                                                                                                             <  1:78813/251‑1 (MQ=33)       gtaTAAGGTCTCCGCCCATTCCCAGCCTTGGGGTAAAACGGCTCGATGACTGCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTGTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATaa                                                                                                                                                                                                                          <  2:471765/249‑1 (MQ=255)         aTAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAAt                                                                                                                                                                                                                        <  2:340872/251‑1 (MQ=35)           aaGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATACCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATg                                                                                                                                                                                                                       <  2:335463/250‑1 (MQ=25)                cGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATTGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAAGGACACaa                                                                                                                                                                                                                 <  1:768899/251‑1 (MQ=37)                cGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGAcaca                                                                                                                                                                                                                  <  1:219222/250‑1 (MQ=38)                  ccGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCGTGGCAGAATCTGCTCCATGCGGGACCAGAAAATCTCTTTTCTGGCCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTCAGTTGATGACTCAAGATGAACACTGTTCTATGGCTCCAAATGCCCATCATGATCTCATATCAGGGGCTTGTTCGCCCCTTACTTACTCCCTAACATAAATGACACAAt                                                                                                                                                                                                                >  2:236212/1‑250 (MQ=11)                   cGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCTGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCCGGGCCTTGTTCGCACCTTCCTTCATCCCTAACATAAATGACACAATa                                                                                                                                                                                                               >  1:547274/1‑250 (MQ=255)                    ggCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGAGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGAACTCATATCCGGGACTTGTTCGCACCTTCCTTAATCCCTCACATAAATGCCACAATaa                                                                                                                                                                                                              >  2:806230/1‑250 (MQ=255)                          tACCAGCCTTGGGGAAAAACGGCTCGATGACTTCCACCATGTTTTGCCCTGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGCCAAACATGATCTCATATCAGGGCTTTATTCGCACCTTCCTTACTCCCTAACATAAATGAACCAATaaactc                                                                                                                                                                                                          >  2:747666/1‑245 (MQ=11)                                                   gATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGaa                                                                                                                                                                              <  1:238606/251‑1 (MQ=255)                                                    aTGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGaat                                                                                                                                                                             <  1:628583/251‑1 (MQ=255)                                                                    tttGCCATGGCCGAATCTGCTCCATGCGGGACAAGCAACTCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGACCCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATCACAGGGACTTGTTCGCACCTTCATTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATATTGTAAAGAttt                                                                                                                                                             >  2:571271/1‑251 (MQ=18)                                                                            ggCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCAt                                                                                                                                                     >  1:217950/1‑251 (MQ=255)                                                                                        tCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGc                                                                                                                                         >  1:728930/1‑251 (MQ=255)                                                                                                 gACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTTCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTAc                                                                                                                                <  1:96184/251‑1 (MQ=255)                                                                                                       aaaaTCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGAAACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTACATCTCGGAACAGGCATAATGTACTaaa                                                                                                                            >  1:556447/1‑249 (MQ=255)                                                                                                              ctTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATa                                                                                                                      <  1:268823/248‑1 (MQ=255)                                                                                                                     ggTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGATCCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCTCAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACt                                                                                                             <  1:865081/250‑1 (MQ=255)                                                                                                                     ggTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCATGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTa                                                                                                               <  1:238779/248‑1 (MQ=255)                                                                                                                      gTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACttt                                                                                                           <  1:417418/251‑1 (MQ=255)                                                                                                                      gTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACttt                                                                                                           <  2:582459/251‑1 (MQ=255)                                                                                                                                   tACTGATGAATTCAATGTCGGCGAAGGTAAGATGATGACTCAGGATGAACCCTGGTCTATTGCTCAAGATGACAAACATGATCTCATATCAGGGAATTGTACGCACCTTCCGTAATCCCTAACATAAATGACACAATAAAAGCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCAGAATGTACTAAAAGCAGAACGCTTACTTTCGACA‑TATTTaa                                                                                              <  2:31758/250‑1 (MQ=255)                                                                                                                                      tgctgAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCCTAATATACTAAAAGCATAACGCTTACTTTCGACA‑TATTTAatat                                                                                           >  2:459232/1‑250 (MQ=255)                                                                                                                                         tgAATTCACTGTCGGCGAAGGTAAGTTGCTGACTCATGATGAAACCTTCTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCAACTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCAAAGGCAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTAGGAACAGGCATAATGTCCTAAAAGCATAACGCTTACTTTC‑ACAATATTAAATATATGt                                                                                       >  2:56808/1‑251 (MQ=25)                                                                                                                                          gAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACA‑TATTTAATATATg                                                                                        <  1:331934/249‑1 (MQ=255)                                                                                                                                          gAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACA‑TATTTAATATATGt                                                                                       <  2:300177/250‑1 (MQ=255)                                                                                                                                           aaTTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACA‑TATTTAATATATGTCa                                                                                     <  2:174771/251‑1 (MQ=255)                                                                                                                                                 atggaggCGAAAGTAAGTTGATGTATCATGATGAACACGGGTCTATGGCTCCAGATGACAAACATGATCTCATATGAGGGACTTGTTCGCATCTTCCTTAATCACTAAAATAAATGACATAATAAAATCAGAAAGCACAGGAAATTTTATTACGGAATAATCATGAAAAGATTTCGCTTCATCTCGGAACAGGAATAATGTACTAAAAGCAGAACGCTTACTTTCGACA‑TATTTAATATAGGTCAGCAAat                                                                               <  2:347639/246‑1 (MQ=25)                                                                                                                                                   ggcGGCGAAGATAAGATGATGACTCATGATGAACACTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGAACCTTCCTTAATCCCTAACATATATGACACATTAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAACGATTTCGCTTCATCTCGAAACAGGCATAATGTACTCAAAGCATAACGCTTACTTTCGACA‑TATTTAATATATGTCAGCCAatc                                                                              >  2:784824/3‑250 (MQ=37)                                                                                                                                                                                 gaACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACA‑TATTTAATATATGTCAGCAAATCATCATGCTTCATGATGATATCGGGATTCaa                                                <  1:806230/250‑1 (MQ=255)                                                                                                                                                                                          tCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACA‑TATTTAATATATGTCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAAt                                       <  2:728930/250‑1 (MQ=255)                                                                                                                                                                                            tATGGCTCAAGATGACAAACATGATCTCATATCAGGGCCTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACA‑TATTTAATATATGTCAACAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGt                                     >  2:760655/1‑250 (MQ=255)                                                                                                                                                                                             aTGGCTCCAGATTACAAACATGATCTCATATCAGCGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATTACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATTTAAATATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACA‑TTTTTAATATATGTCAGCAAATCAGCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGt                                     <  1:749361/249‑1 (MQ=255)                                                                                                                                                                                               ggCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACA‑TATTTAATATATGTCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAatc                                 >  1:353098/1‑251 (MQ=255)                                                                                                                                                                                                   ccAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAATATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACA‑TATTTAATATATGTCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAatcat                               <  1:179507/249‑1 (MQ=255)                                                                                                                                                                                                    cAGATGACAAACATGATCTCATATCATGGACTTGTTCGCACCTTCCTTAATTCCTAACATAAATGACACAATAAAATCAGAAAGTACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTGATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGCCA‑TATTTAATATATGTCAGCAAATCATCATGCTGCATGATGATATCGGGATTCAAAAACAAAATGTAaacatcat                            <  1:415025/251‑1 (MQ=255)                                                                                                                                                                                                     aGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAGTCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACA‑TATTTAATATATGTCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAatcatcatc                           >  1:819874/1‑251 (MQ=255)                                                                                                                                                                                                        tGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACA‑TATTTAATATATGTCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGc                        >  1:549661/1‑251 (MQ=255)                                                                                                                                                                                                                       cATATCAGGGACTTTGTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGAATAATGTACTAAAAGCATAACGCTTACTTTCGACA‑TATTTAATATATGTCAGCAAATCATCATGCTTCATGATGATATCGTGATTCAAAAACAAAATGTAATCATCATCTTCGGGTCTATATTTTTc         <  1:749557/251‑1 (MQ=255)                                                                                                                                                                                                                          atCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACA‑TATTTAATATATGTCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCtt      <  1:249989/251‑1 (MQ=255)                                                                                                                                                                                                                               ggACTAGTTCGCACCTTCCTTAATCCCTAACATACAGGACACAATAAAATCAGATAGCACTGGAATTTTTCTTACGGAATAATCATGTAAAGATTGCGCTTCATCTAGAAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACA‑TATTTCATATATGTAAGCAAATCTACATGCTTCATGATGAAAACGGCATTCAAAAACAAAATGTATTCATCATCTGCGGGTCTATATTTTTCATTTACa  >  2:9082/1‑250 (MQ=255)                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                     TCCAGCGGATAAGGTCGCCGGCCATTACCAGCCTTGGGGTAAAACGGCTCGATGACTTCCACCATGTTTTGCCATGGCAGAATCTGCTCCATGCGGGACAAGAAAATCTCTTTTCTGGTCTGACGGCGCTTACTGCTGAATTCACTGTCGGCGAAGGTAAGTTGATGACTCATGATGAACCCTGTTCTATGGCTCCAGATGACAAACATGATCTCATATCAGGGACTTGTTCGCACCTTCCTTAATCCCTAACATAAATGACACAATAAAATCAGAAAGCACAGGAAATTTTCTTACGGAATAATCATGTAAAGATTTCGCTTCATCTCGGAACAGGCATAATGTACTAAAAGCATAACGCTTACTTTCGACA‑TATTTAATATATGTCAGCAAATCATCATGCTTCATGATGATATCGGGATTCAAAAACAAAATGTAATCATCATCTGCGGGTCTATATTTTTCCTTTACA  >  NC_000913/2102703‑2103174

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.