New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4507459 =NA (NA)17 (0.210) 16/486 3.1 23.9% noncoding (1221/1221 nt) IS30 repeat region
?NC_000913 = 4640419 54 (0.670)coding (18/141 nt) yjjY uncharacterized protein YjjY
Rejected: Coverage evenness skew score above cutoff.

GCAGAGTTTAAACGCGAATCCGCTCAACTGGTTGTTGACCAGAAATACACGGTGGCAGATGCCGCGAAAGCTATGGATGTTGGCCTTTCCACAATGACAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCC  >  NC_000913/4507218‑4507693
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                          
gcAGAGTTTAAACTCGAATCCGCTCAACTGGTTGTTGCACAGAAATACACGGTGGCAGATGCCGCGAAAGCTATGGATGTTGGCCTTTCCACAATGACAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTATCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACACCGGATTGAAATGGCAAATGCAATATTAAACAGGATACTGTAGATTc                                                                                                                                                                                                                                    >  1:572247/1‑250 (MQ=255)
    agTTTAAACGCGAATCCGCTCAACTGGTTGTTGACCAGAAATACACGGTGGCAGATGCCGCGAAAGCTATGGATGTTGGCCTTTCCACAATGACAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCt                                                                                                                                                                                                                               >  1:43277/1‑251 (MQ=255)
        tAAACGCGAATCCGCTCAACTGGTTGTTGACCAGAAATACACGGTGGCAGATGCCGCGAAAGCTATGGATGTTGGCCTTTCCACAATGACAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAAAGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAAATTCAATCTGTc                                                                                                                                                                                                                            >  2:741678/1‑250 (MQ=255)
         aaaCGCGAATCCGCTCAACTGGTTGTTGACCAGAAATACACGGTGGCAGATGACGCGAAAGCTATGGATGTTGGCCTTTCCACAATGACAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCGCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGtaa                                                                                                                                                                                                                           <  1:474843/250‑3 (MQ=255)
          aaCGCGAATCCGCCCAACTTGTTGTTGACCAGAAATACACGGTGGCAGATGCCGCGAAAGCTATGGATGTTGGCCTTTCCACAATGACAAGATGGGTCAAACAACTGCGTGATGATCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGACATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAAt                                                                                                                                                                                                                         <  1:513930/251‑1 (MQ=255)
           aCGCGAATCCGCTCAACTGGTTGTTGACCAGAAATACACGGTGGCAGATGCCGCTAAAGCTATGGATGTTGGCCTTTCCACAATGACAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAAGATTAAAAAGGCTACTGTAGATTCAATCTGTCAATg                                                                                                                                                                                                                        <  1:209219/251‑1 (MQ=255)
              cgAATCCGCTCAACTGGTTGTTGACCAGAAATACACGGTGGCAGATGCCGCGAAAGCTATGGATGTTGGCCTTTCCACAATGACAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAACAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCa                                                                                                                                                                                                                      >  2:130780/1‑250 (MQ=255)
                        cAACTGGTTGTTGACCAGAAATACACGGTGGCAGATGCCGCGAAAGCTATGGATGTTGGCCTTTCCACAATGACAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCttt                                                                                                                                                                                                            <  1:634472/250‑1 (MQ=255)
                         aaCTGGTTGTTGACCAGAAATACACGGTGGCAGATGCCGCGAAAGCTATGGATGTTGGCCTTTCCACAATGACAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCa                                                                                                                                                                                                          <  1:192687/251‑1 (MQ=255)
                              gttgttGACCAGAAATACACGGTGGCAGATGCCGCGAAAGCTATGGATGTTGGCCTTTCCACAATGACAAGATGGGTCAAACACCTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTAt                                                                                                                                                                                                     >  1:518541/1‑251 (MQ=255)
                              gttgttGACCAGAAATACACGGTGGCAGATGCCGCGAAAGCTATGGATGTTGGCCTTTCCACAATGACAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTAt                                                                                                                                                                                                     <  2:318979/251‑1 (MQ=255)
                               ttgttgACCAGAAATACACGGTGGCAGATGCCGCGAAAGCTATGGATGTTGGCCTTTCCACAATGACAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTAtc                                                                                                                                                                                                    >  1:708852/1‑251 (MQ=255)
                                tgatgACCAGAAATACCCGGTGGCAGATGCCGCGAAAGCTATGGATGTTGGCCTTTCCACAATGACAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTAATGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTAtct                                                                                                                                                                                                   >  2:144569/4‑251 (MQ=255)
                                 gttgACCAGAAATACACTGGGGCAGATGCCGCGAAAGCTATGGATGTTGGCCGTTCCACAATGAAAAGATGGGTCAAACAACTGCGTGATGAGCGGCAGGGCAAAACCCCAAAAGCCTCTTCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTAtctc                                                                                                                                                                                                  <  2:684388/251‑1 (MQ=255)
                                 gttgACCAGAAATACACGGTGGCAAATGCCGCGAAAGCTATGGATGTTGGCCATTCCACAATGACAAGATGGGGCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGGCAATGCAACACCCCTTTCAATTAtct                                                                                                                                                                                                   <  2:8289/250‑1 (MQ=255)
                                   tgACCAGAAAGACACTGGGGCAGATGCTGAGAAAGCTATGGATGTTGGCCTTTCCACAATGACAAGATGGGTCAAACAACTGCGCGATTAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATTCGTAAGCTGAGGAAAAAGTTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTTTCAATGCACCACCCCTTTCAATTATctct                                                                                                                                                                                                 <  1:416862/250‑1 (MQ=255)
                                       cAGAAATACACGGTGGCAGATGCCGCGCAAGCTATGCATGTTGGCCTTTCAACAATGACAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAACAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTACAATTATCTCTTTCgg                                                                                                                                                                                            >  1:319019/1‑251 (MQ=255)
                                       cAGAAATACACGGTGGCAGATGCCGCGAAAGCTATGGATGTTGGCCTTTCCACAATGACAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCgg                                                                                                                                                                                            <  1:741678/251‑1 (MQ=255)
                                         gAAATAAACGGTGTTAGATGCCGCTAAAGTTATGGATGTTTGCCCTTCCCTAATGAAACGATTGGTCAAACAACTGCGGGATGGGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCCGAAAAAATCGAAATGCTTAATCTGAGTAAAAAGCTTCAACGTATGGAAATGGATAATGAAATATTAAAAAGTCTACTGTAGATGCCATTGGCCAATTCAACACCCCTTTCAATTATCTCGTTCgggg                                                                                                                                                                                          <  2:533914/251‑3 (MQ=255)
                                               cacGGTGGCAGATGCCGCGAAAGCTATGGATGTTGGCCTTTCCACAATGACAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTCAGATGAGGAAACAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGTGGTTTTg                                                                                                                                                                                     >  2:431055/1‑250 (MQ=255)
                                               cacGGTGGCAGATGCCGCGAAAGCTATGGATGTTGGCCTTTCCACAATGACAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGa                                                                                                                                                                                    <  1:193738/251‑1 (MQ=255)
                                                  ggTGGCAGATGCCGCGAAAGCTATGGATGTTGGCCTTTCCACAATGACAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACt                                                                                                                                                                                 >  2:171375/1‑251 (MQ=255)
                                                       cAGATGCCGCGAAAGCTATGGATGTTGGCCTTTCCACAATGACAAGATGGGTCACACAACTGCGTGAAGAGCGTCCGTGCAACACACCAACATCCTCTCCGATCACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAACCTACACAGGCTTGAAAGCGAGAGTGAAGTATTAGAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTGGGTGTTTTGACCttaagg                                                                                                                                                                            >  2:93854/1‑247 (MQ=255)
                                                         gATGCCGCGAAAGCTATGGATGTTGGCCTTTCCACAATGAAAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGACTCACCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGCAAAAGCAACAACGGATTGAAATGGAGAATGAACTATTAAAAAGGCTCCTGAAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTATTTAGGAGTTTTATAATTCAgtgt                                                                                                                                                                          >  2:738733/1‑251 (MQ=255)
                                                              cgcgAAAGCTATGGGTGTTGGCCTTTCCACAATGACAAGATGGGTCAAACAACTGCGTGATGAGCGGCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTGCAACGGAGTGAAATGGAGAATGAAATATTAAAAAGGCTACTGGAGATTCAATCTGTCAATGCAACTCTCCATTCGATTATCGCTTTCCGGGTTGTGAACTTCATTGGCTTtc                                                                                                                                                                     <  2:827069/251‑1 (MQ=255)
                                                              cgcgAAAGCTATGGATGTTGGCCTTTCCACAATGACAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTATTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCtttt                                                                                                                                                                     >  1:803338/1‑250 (MQ=255)
                                                                  aaaGCTATGGATGTTGGCCTTGCCACAATGACGAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGATGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATACTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACTCCCCTTTCAATTATCTCTTTCGGTGTTTTTAACTTCAGTGTCTTtctct                                                                                                                                                                  <  2:276295/250‑2 (MQ=39)
                                                                                    cTTTCCACAATGACAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTTTTGTTTAGCTgcgc                                                                                                                                               >  2:206465/1‑248 (MQ=255)
                                                                                    cTTTCCACAATGACAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGagc                                                                                                                                               >  1:92572/1‑251 (MQ=255)
                                                                                              tGACAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAAcc                                                                                                                                        >  2:186601/1‑248 (MQ=255)
                                                                                                 cAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCt                                                                                                                                  <  1:130780/251‑1 (MQ=255)
                                                                                                  aaGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGCACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTgtg                                                                                                                                                >  2:664560/1‑234 (MQ=255)
                                                                                                  aaGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGag                                                                                                                                                <  1:664560/236‑1 (MQ=255)
                                                                                                     aTGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGtt                                                                                                                              >  1:165980/1‑251 (MQ=255)
                                                                                                        ggTCAAACAACTGCGTGATGAGCGGCAGTGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATAAGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCAt                                                                                                                           <  2:93483/251‑1 (MQ=255)
                                                                                                         gTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTCGCTGAGCAGCAACCAGATATAGTTCATg                                                                                                                          >  1:98198/1‑251 (MQ=255)
                                                                                                                        gatgaGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGc                                                                                                           >  1:752384/1‑251 (MQ=255)
                                                                                                                            aGCGTCAGGTCAAAACCACAAAAGCCACTACTATATCAACAGAACAAAGAGAAATACGTAAACGGAGGAAAATTCTACAACGTATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGAGTCAATATGCCAACGCAACCCCACTTTCAATTATCTCGTTCGGTGTTCTGAACTGCAGTGTCTTTCTCGGTCTGTTGTTGAGCTGAGCAGCAACCAGATCTAGTTCATGTTGTGTATATTGCGCacga                                                                                                       <  2:776475/251‑4 (MQ=12)
                                                                                                                            aGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGa                                                                                                       <  1:186601/251‑1 (MQ=255)
                                                                                                                              agTCAGGGCTAAACACCAAAAGCCTTCACGAGAACACCAGAACAAATCGAAATACGTAATATGAGGAAAAAGCTACAACGGAGTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTAGCTCTTTCGGTGTTTTGAACTTCAGTGTTTTTCTCGGTCGGTTGTTGAGCTGAGCAGCAACCAGATCTAGTGCATGTTGAGTATATTTGGCAAGACa                                                                                                     <  2:274855/250‑1 (MQ=21)
                                                                                                                                  aGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTc                                                                                                 <  2:43277/251‑1 (MQ=255)
                                                                                                                                   gggCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTGCAGTGTCTTTCTAGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCt                                                                                                <  1:738733/251‑1 (MQ=255)
                                                                                                                                      cAAAACACCAAAAGCCTCACCGATAAAACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCtttt                                                                                             <  2:79233/251‑1 (MQ=255)
                                                                                                                                                                    cAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCAttt                                                                <  1:240401/251‑1 (MQ=255)
                                                                                                                                                                     aGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTtg                                                               <  1:136907/251‑1 (MQ=255)
                                                                                                                                                                          aaaTCGAAATACGTAAGCTGATGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTCCGTTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTTTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTTGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTtc                                                          <  1:524484/251‑1 (MQ=255)
                                                                                                                                                                            aTCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTGCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTtctc                                                        <  2:92572/251‑1 (MQ=255)
                                                                                                                                                                             tCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTtctc                                                        >  1:256635/1‑250 (MQ=255)
                                                                                                                                                                                         aGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAAc                                                                                                                                                                                  >  1:26496/1‑116 (MQ=255)
                                                                                                                                                                                         aGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCCCTTTCGGTGTTTTGAAc                                                                                                                                                                                  <  2:26496/116‑1 (MQ=255)
                                                                                                                                                                                          gCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGttt                                                                                                                                                                                       >  2:702472/1‑110 (MQ=255)
                                                                                                                                                                                          gCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGttt                                                                                                                                                                                       <  1:702472/110‑1 (MQ=255)
                                                                                                                                                                                                         aCAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTATATTCAATCTGTCAATGCAACACCCCGTTCAATTATCTCTTGCGGTGTTTGGAACTTCAGTGGCTGTCGCGGTCTGGTGTTTAGCTGATCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGGCTTTTTAGGAAAGTGCTGCCGAAGTAGCCCTGTTGTGTGCTCGTTTGTGCCCCGCTGCCAAGGACTCTGAg                           <  2:856733/251‑1 (MQ=17)
                                                                                                                                                                                                           aaCGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGag                                                                                                                                                <  2:735488/132‑1 (MQ=255)
                                                                                                                                                                                                           aaCGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGag                                                                                                                                                >  1:735488/1‑132 (MQ=255)
                                                                                                                                                                                                                      aTGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTa              <  1:144569/251‑1 (MQ=255)
                                                                                                                                                                                                                          agaATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGCGGATCGCAGAAGTAAACt          >  2:480992/1‑251 (MQ=255)
                                                                                                                                                                                                                            aattaaaTATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACATCCCTTTCAATTAGCTCTTTCGGGGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTGTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACttt        <  2:311746/247‑1 (MQ=255)
                                                                                                                                                                                                                            aaTGAAATATTAACAAGGCTACTGTAGCTTCACTCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACttt        >  1:620391/1‑251 (MQ=255)
                                                                                                                                                                                                                                  atatTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGcc  >  1:318321/1‑251 (MQ=37)
                                                                                                                                                                                                                                                  |                                                                                                                                                                                                                                          
GCAGAGTTTAAACGCGAATCCGCTCAACTGGTTGTTGACCAGAAATACACGGTGGCAGATGCCGCGAAAGCTATGGATGTTGGCCTTTCCACAATGACAAGATGGGTCAAACAACTGCGTGATGAGCGTCAGGGCAAAACACCAAAAGCCTCTCCGATAACACCAGAACAAATCGAAATACGTAAGCTGAGGAAAAAGCTACAACGGATTGAAATGGAGAATGAAATATTAAAAAGGCTACTGTAGATTCAATCTGTCAATGCAACACCCCTTTCAATTATCTCTTTCGGTGTTTTGAACTTCAGTGTCTTTCTCGGTCTGTTGTTTAGCTGAGCAGCAACCAGATCTAGTTCATGTTGAGTATATTGGGCAAGACATGTCTTTTTAGGAAAGTACTGCCGAATTAGCCCATTTGTGTTCTCATTTGTTCCCCGCTGCCAAGGACTCTGAGGATCGCAGAAGTAAACTTTAACGCC  >  NC_000913/4507218‑4507693

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.