New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3584195	NA (NA)	119 (1.470)	100/490	0.0	96.8%	noncoding (768/768 nt)	IS1	repeat region
	?	NC_000913	4289448 =	4 (0.050)					coding (204/567 nt)	nrfB	periplasmic nitrite reductase penta‑heme c‑type cytochrome

CCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTG  >  NC_000913/3583951‑3584440                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                      ccTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGTAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAtt                                                                                                                                                                                                                                                 >  1:757864/1‑251 (MQ=17)    ttGACGTGGGGAATTGGATGACGGATGGCTGTCCGCTGTATAAACCCCGCCTGAAGGGAAAGCTGCAAGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCGGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGTAGTCATTACCGACATTaa                                                                                                                                                                                                                                               <  2:610981/250‑1 (MQ=11)      gACGGGGTGATATGGATGACGGATGGCTGGCCGCTGTAGGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAg                                                                                                                                                                                                                                            <  2:581582/251‑1 (MQ=21)        cGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCAAGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAAAATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGt                                                                                                                                                                                                                                           >  2:855608/1‑250 (MQ=25)            gtgATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACtt                                                                                                                                                                                                                                      <  1:259937/251‑1 (MQ=37)                aatGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGGAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCGGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACtttttt                                                                                                                                                                                                                                  <  2:596740/250‑1 (MQ=255)                 atGGATGACGGAAGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACttttttt                                                                                                                                                                                                                                 >  2:773005/1‑250 (MQ=255)                     aTGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCGGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAAt                                                                                                                                                                                                                             <  1:817982/251‑1 (MQ=255)                          ggATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTagag                                                                                                                                                                                                                        <  1:208563/251‑1 (MQ=255)                          ggATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTag                                                                                                                                                                                                                          >  2:315289/1‑249 (MQ=255)                                  gtccGCTGGATGAATCCCGCCTGAAGGGAAAGCTTCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATAtt                                                                                                                                                                                                                <  2:308516/249‑1 (MQ=255)                                             gAATCCCGCCTGTAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCGCAAAATCGGTGGAGCTGAATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAAAAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGaaa                                                                                                                                                                                                      <  2:671423/250‑1 (MQ=255)                                                 cccGCATGAAGGGAAAGCGGCACGTAATCAGCAAGCGATATACGCAGCGAAGTTAGCGGCATAACCTGAATCTGAGGCAGCACCTGGAACGGCTGGGACGGAAGTCGCTGTAGTTCTCAAAATCGGTGGAGCTGCATGACAAAGGCATCGGGCATTAGCTGAACATAAAACACTAACAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTGTGAAATTAGAGATAATATTGGCACAGAAAagata                                                                                                                                                                                                 <  2:589283/251‑1 (MQ=17)                                                     ccTGAAGGGCAAGCTGCACGTAATCATCAAGAGATATACGCAGCGAATTGAGCGGCATAAACTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGACGTCGCTGTCGTTCTCCAAATCGGGGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACCCTAACAATAAGTTGGACTCATTAACGACATTAAAAGAAACTTTTTTGAAATTAGTGATAATTTTGGCACAGAAGATATATTcc                                                                                                                                                                                             >  2:31321/1‑250 (MQ=14)                                                      cggAAGGGAAAGCTGAACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCTCTGTCGTTCTCAAAATCGGGGGAGCGGCATGACAAAGTCAGCGGGCATTATCTGAACATAAAACACTATCAATAAGTGGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAg                                                                                                                                                                                            <  2:429095/249‑1 (MQ=17)                                                        gAAGGGAAATCTGCCCGTAATCATCAAGCGCTTTACGCATCGAAGTGAGCGGCATATCCTGAATCTGAGTCAGCTCCTGGCCCGGTTTGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGTCAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGtt                                                                                                                                                                                          <  2:728918/251‑1 (MQ=18)                                                        gAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGtt                                                                                                                                                                                          <  2:363470/251‑1 (MQ=255)                                                            ggAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCACTAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGtt                                                                                                                                                                                      >  1:506064/1‑251 (MQ=255)                                                               aaGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAg                                                                                                                                                                                   <  2:672577/251‑1 (MQ=255)                                                                       cGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTtct                                                                                                                                                                           >  1:341281/1‑251 (MQ=255)                                                                        gTAAGCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCGGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACCTGTTGGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTtctc                                                                                                                                                                          <  1:862020/251‑1 (MQ=255)                                                                          aaTCAGCCAACGATATACGCAGAGAATTGAGCGGCCTAAAATGAATCTGAGGAAGCACCTGGCACGGATGGGACGGCAGTCTATGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACAATATCAATAAGTTGGAGTCATTACAGGCATTCAACGTAACTTTTTTGAATATAGGGTTCATATTGGCACAGAAAATATATTCAGTTAGTTTAGTAAttattctt                                                                                                                                                                        >  2:364543/1‑245 (MQ=9)                                                                                    cGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTaa                                                                                                                                                               >  1:574891/1‑250 (MQ=255)                                                                                     gATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAAc                                                                                                                                                             <  1:540318/251‑1 (MQ=255)                                                                                          aCGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAAt                                                                                                                                                        >  1:412586/1‑251 (MQ=255)                                                                                           cGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATc                                                                                                                                                       >  1:123889/1‑251 (MQ=255)                                                                                                cGAATTGGGCGGCATAACCTGAATCTGAGGCAGCACCAGGCACGGCTGGGACGGCAGTCGCTGTCGTTCTCAAAATCGGAGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCCATAAGTTGGAGTCATTACCGACATTAAAAGTAAATTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTATTAAACGAAATCATgg                                                                                                                                                   >  2:627098/1‑250 (MQ=21)                                                                                                  aaTTGAGCGGCATAACCTTAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCCTTCTCACAATCGGTGTAGCTGCCTGACAAAGTCATCGGGCATTGTCTGAACATAAAACCCTATCACTAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGACATTAGAGATACTATTCGAACAGAACATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCCTggccc                                                                                                                                                >  2:194624/1‑248 (MQ=18)                                                                                                  aaTTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGAc                                                                                                                                                 >  1:706303/1‑250 (MQ=255)                                                                                                   atttaGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTTAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAg                                                                                                                                               <  1:243601/247‑1 (MQ=255)                                                                                                   aTTGAGCGGCATAACCTGAATCTGGGGCAGCACCGGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGTTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAg                                                                                                                                               <  2:444883/251‑1 (MQ=255)                                                                                                      gggCGGCTTAACCTGAATCTGAGGCAGCACCTGGCACGGCGTGGATGGAAGTCGCTGTCTTTCTCAAAATCGGTGGAACTGCATTACAAATTCATCGGGTATTATCTGAACATAAAACACTATCAATAAGTTGGAGTGATTACCGACATTAAAAGTAACTTTTTTGAAATTAGATATAATAGTGGCTCAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAAACATGTACattt                                                                                                                                             <  2:322371/248‑4 (MQ=21)                                                                                                      gaactgCATAACCTGAATCTGAGGCAGCACCTGTCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACGATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTGTTGAAATTAGAGATAATATTGGCACATAAAATATATTCAGTTCGGTTAGTGATTTCTCATCATTCTTAAACGAAATCATGGACAgtt                                                                                                                                             <  2:423514/245‑1 (MQ=21)                                                                                                       aGCGGCATAACCTGAATCTGAGGCAGCACCTGTCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTCCGTTTAGTGATTTCTCTTCATTCTTAAACTAAATCATGGACAgttgt                                                                                                                                           <  1:689643/251‑1 (MQ=255)                                                                                                          ggCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTc                                                                                                                                         >  2:411516/1‑250 (MQ=255)                                                                                                             aTAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCataa                                                                                                                                     <  1:103028/251‑1 (MQ=255)                                                                                                                     aaTCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATAGTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTGCATTCTTAAACTAAATCATGGACAGTTGTTCATAATAATCaaa                                                                                                                             <  1:310314/251‑1 (MQ=255)                                                                                                                           acgcagcaCCGTGCACTGCTGAGACGGAAGTAGCGGGCGTTCTCAAAAACGGTGGAGCTGCAGGACATAGGACCCGGGCAGTATCTGAACATAAAACCTTATCAAGAAGTTGGATTCATTACCGACAATAAAAGTAACTTTTTTGAAAGTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTGCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGaaa                                                                                                                       <  2:195130/249‑1 (MQ=255)                                                                                                                              cagcaCCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACaa                                                                                                                    <  1:261329/251‑1 (MQ=255)                                                                                                                                      ggCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCAt                                                                                                             <  1:322337/250‑1 (MQ=255)                                                                                                                                           ggCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTaa                                                                                                        >  1:146633/1‑250 (MQ=255)                                                                                                                                                 gACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGc                                                                                                 <  1:292338/251‑1 (MQ=255)                                                                                                                                                 gACGGAAGTAGCTGTAGTTCTAAAAACAGGTGGAGATGCAATATAAAGTCAGCGGGCTGTATCTGAACATAAAACACTATCAAAAAGGTGGAATCATTACCGACATTAAAAGTAACTTTGTTGAAATTAGAGATAATATTGGCACAGAAAATATATCCAGTTCGTTTAGTGATTTCTTTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAAACAAAATGAAACAAAAATCATTGTAAACCATga                                                                                                 <  2:419550/251‑2 (MQ=255)                                                                                                                                                     gAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATc                                                                                             <  1:669191/251‑1 (MQ=255)                                                                                                                                                       aGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCtt                                                                                           >  1:717685/1‑251 (MQ=255)                                                                                                                                                                 gTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGAtt                                                                                 <  2:299441/251‑1 (MQ=255)                                                                                                                                                                   tctcAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTa                                                                                <  1:332825/250‑1 (MQ=255)                                                                                                                                                                   tctcAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTAc                                                                               >  1:559202/1‑251 (MQ=255)                                                                                                                                                                   tctcAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACAGAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTa                                                                                <  2:717685/250‑1 (MQ=255)                                                                                                                                                                      cAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGCCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACGGTTGTTCATAATAATCAAAAGTAAACAAAAATCATTGTAATCCATGCCATATTTTTAGAGAtttcc                                                                              <  1:653441/249‑4 (MQ=255)                                                                                                                                                                             ggTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGaaaa                                                                     <  1:715258/251‑1 (MQ=255)                                                                                                                                                                               tGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATACTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACAATGCCATCTTTTTAGAGATTACCAGCAGAAAAtt                                                                   >  1:164246/1‑251 (MQ=255)                                                                                                                                                                                ggAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTc                                                                  >  1:740871/1‑251 (MQ=255)                                                                                                                                                                                ggAGCTGCATGACAAAGTCATCGGGCATTATCTGAACAAAAAACCCTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTTCCAGCAGAAAATTc                                                                  <  2:635858/251‑1 (MQ=255)                                                                                                                                                                                      gCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGt                                                             <  1:502724/250‑1 (MQ=255)                                                                                                                                                                                      gCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACGTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGt                                                             <  1:757134/250‑1 (MQ=255)                                                                                                                                                                                        aTGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCg                                                          <  1:638278/251‑1 (MQ=255)                                                                                                                                                                                            cAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAAt                                                      <  1:755135/251‑1 (MQ=255)                                                                                                                                                                                             caagtaaacGGGCATTAACTGAACATAAAAAACTAACAATAAGTTGGCGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATCATATTGGAACAGAAAATATATTCAGTTCGTTTCGTGATTTCTCTTCATTCTTAAACGAAATAATGGACAGTTGTTCATAATAATCAACAGGAAACAAAAATCCTTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAAtt                                                     >  2:802679/9‑251 (MQ=255)                                                                                                                                                                                             aaaGGCATCGGGCATTATCTGAACATAAAACACTATCAAAAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAAtt                                                     <  2:521049/251‑1 (MQ=255)                                                                                                                                                                                               aGTCATCGGGCATTATCTGAACAAAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTa                                                   <  2:123889/251‑1 (MQ=255)                                                                                                                                                                                                   aTCGGTCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACATAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAg                                               <  1:741519/251‑1 (MQ=255)                                                                                                                                                                                                      gggCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACAATAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATGCAGTTCGGTTAGTGAGTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGAGTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGc                                            <  1:802679/251‑1 (MQ=255)                                                                                                                                                                                                       ggCATTATCTGAACATAACACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAAAGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTCCCAGCAGAAAATTCCTTGTTCGAAATTTAGCATTGc                                            >  2:209804/1‑250 (MQ=255)                                                                                                                                                                                                              tCTGAACATCAAACACTATCACTACGATGGAGTCATTACCGACATTAAAAGGAACTTTTTTGAAATTAGAGATAATATTGACACAAAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGACATCATGGACAGTTGTTCATAATAATCAAAAGGCAACAAAAATCATTGTAAACCATGCCTTCTTTTTAGCGCTTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCAATg                                    >  2:35884/1‑251 (MQ=255)                                                                                                                                                                                                                        aaaCACTATCAATAAGTTGGAGTCAGTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATTGACAGTTGTTCATAATAATCAAAATGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTATCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGTAAAAACTTa                          <  1:513886/251‑1 (MQ=255)                                                                                                                                                                                                                           cacTATCAATAAGTAGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATTATAATCAAAAGGAAACAAAAATCATTTTAAACCATGCCATCTTTTTAGAGATGACCAGGAGAAAATTCCTAGTCCGTAATTTAGCAGTGCAAGCTATGGAAAGACGTACaa                       <  2:423344/251‑1 (MQ=255)                                                                                                                                                                                                                                                  tACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGACATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTg  >  2:24770/1‑249 (MQ=255)                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                      CCTTTGACGTGGTGATATGGATGACGGATGGCTGGCCGCTGTATGAATCCCGCCTGAAGGGAAAGCTGCACGTAATCAGCAAGCGATATACGCAGCGAATTGAGCGGCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTG  >  NC_000913/3583951‑3584440

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.