| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,296,381 | +GC | intergenic (+587/+55) | gltP → / ← yjcO | glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,296,380 | 1 | . | C | 95.8% | 214.0 / 0.5 | 72 | intergenic (+586/+56) | gltP/yjcO | glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO |
| Reads supporting (aligned to +/- strand): ref base . (2/1); new base C (22/46); total (25/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.69e-01 | |||||||||||
| * | NC_000913 | 4,296,380 | 2 | . | G | 95.8% | 203.6 / ‑0.0 | 72 | intergenic (+586/+56) | gltP/yjcO | glutamate/aspartate : H(+) symporter GltP/Sel1 repeat‑containing protein YjcO |
| Reads supporting (aligned to +/- strand): ref base . (2/1); new base G (23/45); total (25/47) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.82e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.04e-01 | |||||||||||
CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑A‑‑C‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTG > NC_000913/4296192‑4296619 || cgcgTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGCCGCTTAACGCGTCTTATCAGGCCTACGCCAGCCGGCGCTATAGTTTGCTTTAGCTTGATTTTGTATGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGAAGCTTGCCG‑CGTCTTATCAGGCCTATCTTAAc > 2:508107/1‑251 (MQ=11) ttgtaccagtcccaccccAGTCAGCGAAATGGCCTGATGTAGCTTGATTTTGTGGCTTGTACAAGGCGTGTATTCCTCATCCGACATCACTGCCTGATGCGACGCTTAACGCGTCTTATCAGGCTTACGCCAGACAGCGCAGTAGCCTGATTTAGCGTGGTTTTGGAGGGCGGTTTAGGCGTTT‑‑ACGC‑C‑‑TCCTCCGACATGAATGCCTGATGCTACGCTTGCCG‑CGTCTTATCAGTCCTATCTTAACCGt < 2:830024/234‑1 (MQ=2) aTCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGtt > 1:404317/1‑251 (MQ=18) aggcttccGCCAGTCAGCGCAATAGTCTGAATTATCGTGATTTTGTAGGTCGGATAAGGCTTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAAt < 2:615005/244‑1 (MQ=11) ggCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAAtt < 1:829595/251‑1 (MQ=25) aagacagccAGCGCAATAGCCGAATTTAGCGTTATTTTGTAGGACGGGTAAGGGGTGTTTGCCGCATCCGACATCAACGCCGGATGCGACGTTGAACTCGTCTTATCAGGCCTACGCCAGACATCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGAGAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGGCTTATCAGGCCTATCTTAACCTTTGGTTAATTTTTc < 2:413786/242‑1 (MQ=11) agtagtgaggcgctatagtcagatgtAGCGTGATTTTGTAGGTCTGATAAGGGGTTTATGCCGCATCAGACATCAACGCCTGATGCGACGCTTACCGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCaa < 1:417475/226‑1 (MQ=11) ccAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAAc < 1:627854/251‑1 (MQ=255) aGCGTAATAGCCGGATTTAGCCTGATTTTGTAGGTTGGATAAGGCGTTTATGCCGCATCCCACATCAATGCCTGATGCGACGCTTAACGCGTCTTATGATGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGTCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTca < 2:534970/251‑1 (MQ=14) gcAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCacac < 1:29274/251‑1 (MQ=255) aaTAGCCTGATTTAGCTGGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACAccc < 1:874423/251‑1 (MQ=255) aTAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCg > 1:186330/1‑251 (MQ=255) aGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGt < 1:162562/251‑1 (MQ=255) tGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑A‑‑CGCA‑CCATCCGACATCAATGACTGATGCGACGCTTTCCG‑TGTCTTATCAGGCCTATCTTCACCTTTAGTTAATTTTTccacctcagcacacccattaac > 2:776053/1‑229 (MQ=11) gatgtAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCa < 1:160741/246‑1 (MQ=255) gATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCa > 1:719402/1‑250 (MQ=255) ttAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAAc < 1:508107/250‑1 (MQ=255) gagtttGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCa < 1:246634/247‑1 (MQ=255) gATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACGTCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCTTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCAt < 1:531953/251‑1 (MQ=255) gATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCAt > 1:720936/1‑251 (MQ=255) aTTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGCCAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGAAGCTTGCCG‑CGTCTTATCAGGCCTCTCTTAACCGTTGGTTAATTTTTCAATCTCTTCAAACCCGGTATCAAACCCTTCCAt > 2:323522/1‑250 (MQ=17) aGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAATGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCCGGCCTCTCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCAAACAGCTcc > 2:682727/1‑250 (MQ=17) cGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGtt < 1:625761/251‑1 (MQ=255) ggATAAGACGTTTATGCCGCATCCGACATCAACGCCTGATGCGACACTTAACGCGTCTTATCAGGACAACGCCAGACAGCGCTATAGCCTGTTTTAGCGTGATTTTGTAGGCCGGAAAAGGCGTTT‑‑ATGC‑T‑‑CCATCCGACATCCATGCCTGATCCGACGATTGCCC‑CCCCTTTTCACGACACCCTTAACCGATGGTTACTTTTTCAACCTCGTTAAACCCGGTACCAAACCCATCCATACAGCTCAGGTTc > 2:52953/1‑251 (MQ=2) gATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGCCATCAATGCCTGATGCGACGCTTGCCGACG‑CTTACCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGCTATCAAACCCTTCAATCCAACTAAGGTTc > 2:470333/1‑250 (MQ=17) aaGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAAc < 1:631597/250‑1 (MQ=255) gtATGCCCCACCCGACATCAACGCCGGATGCGACTCTTAACCCGTCTTATCGGGCCTACGCCGGACAGCGCAATAGCCTGATTTAGCTTGATTTTGTAGGTCGGATAAGGCGTTT‑‑A‑‑C‑CCCGCATCCGACATCAATGCATGCTGCGACGCTTGCCG‑CTTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAg < 2:832313/250‑1 (MQ=255) gCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAgcgc < 1:804101/250‑1 (MQ=255) gCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCAACGCTTGCCG‑CGTCTTATCAGGCCTCTCTTCACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATAAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCttt > 2:541527/1‑251 (MQ=18) cATCCGACATCAACTCATGATGCTACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAACCTGAATTAGCGTGATGTTGTAGGTCGGATAAGGCTGTT‑‑ACTC‑C‑‑GCTTCCTACATCAATGCCTGATGCGACGCTTGCCT‑CGTCTTATCAGGTCTATCGTAACCGTTGGCGAATTTTTCAAACTCTTCACACCCGGTATCAAACCTTTCCATACAGCTCAGGTTCAACCAGTGCAGCGACtttt < 1:837312/251‑1 (MQ=18) cATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCtttt > 2:314560/1‑251 (MQ=255) cccGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGc < 1:123783/250‑1 (MQ=255) cGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCCGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCACCCAGTGCAGCGCCTTTTGCtt > 2:313785/1‑251 (MQ=255) cGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCtt > 1:748013/1‑251 (MQ=255) aTCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTCCG‑‑C‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGAAGCGCCTTTTGCTTGttc > 2:121940/1‑251 (MQ=255) cAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGttctt < 1:639545/251‑1 (MQ=255) aCGCCTGATGCGACGCTTAACGCTGCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTtcttct < 2:375930/251‑1 (MQ=255) cGCCTGATGCGACGTTTAACGCGTCTTGTCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GAATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTAAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTtctc < 1:134193/251‑1 (MQ=21) cGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTtctc > 1:6379/1‑251 (MQ=255) cGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGACTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTtctc < 1:817117/251‑1 (MQ=255) gCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACATCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCg < 1:158934/251‑1 (MQ=255) aTGCGACGGTTAACGCTTCTTATCAGGGCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATGTTGTAGGTCGGATAAGGCGGTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACTCCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATaa < 2:475162/250‑1 (MQ=21) gCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATaaaa < 1:121940/250‑1 (MQ=255) cgctgCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATATCCTGATTTAGCGTTATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAAcc < 2:77004/247‑1 (MQ=255) gACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATCGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAACCct > 2:424669/1‑251 (MQ=255) cGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACcttc < 1:640790/251‑1 (MQ=255) cGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACcttc < 1:464471/251‑1 (MQ=255) cgTCTTATCAGGCCTACGCCAGACAGTCCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTACCCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGtt > 1:319572/1‑251 (MQ=255) gTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACATTCTTCACCGttt > 1:550820/1‑251 (MQ=255) tttcatgCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTaa < 2:790316/243‑1 (MQ=255) cgggCCTACGCCAGAAATCGCAATAGCCTGATTTAGCGTGATTTTGTAGGGCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAAca < 2:186330/249‑1 (MQ=255) ccggCCTACGCCAGAAAGCGCAATTGTCTGATTTAGCGTTAGTTTGTAGGTCGGATAAGGCGCTT‑‑ACGC‑C‑‑GCATCTGACATTAATGCCTGATGCGACTCTTGCCG‑CGGCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACCCTGCACCCCCGGTATCAATCCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCTCCGTTTAAGAAca < 2:35773/249‑1 (MQ=255) atgCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCTCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAAcat < 2:308012/249‑1 (MQ=255) aGGCCTACGCCATACAGCGCTATAGCCTGATTTAGCGTGATTTTGGAGGGCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCGTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAAcat < 2:17483/251‑1 (MQ=37) ggCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAAcatc > 1:22850/1‑251 (MQ=255) aCGCCAGACAGCGCAATAGCCTGATTTTGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAAcatcat < 2:109087/248‑1 (MQ=255) cGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGTCGTTT‑‑ACGC‑C‑‑GCATCCGCCATCAATGCCTGATGCGCCGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGCATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTccc > 1:551231/1‑251 (MQ=37) cGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAAc > 2:287218/1‑140 (MQ=255) cGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAAc < 1:287218/140‑1 (MQ=255) aCAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGTAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTGCACCGTTTAAGAACAGCATTCCCGCCCAg < 1:710978/251‑1 (MQ=255) caagagcatGATTTCGCGTGATTTTGTAGGTAGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTGTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGGCCGGTACTCg < 2:116951/243‑1 (MQ=37) aTAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTCACCGTTGGTTACTTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGCTAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTAc > 2:778637/1‑246 (MQ=255) aTAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACAGCATTCCCGCCCAGTAc < 1:778637/246‑1 (MQ=255) ccTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATaa < 1:234430/251‑1 (MQ=255) gATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAAc < 1:224486/249‑1 (MQ=255) aTTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATGCCCGCCCAGTACTCGGAATAACCgg < 1:314560/251‑1 (MQ=255) tAGCGTGATTTTGGAGGTCGGATAAGTCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGtt < 2:404973/250‑1 (MQ=255) aGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCg < 1:464557/251‑1 (MQ=255) tttGTAGGTCGGCTAAGGCGATT‑‑ACGC‑C‑‑GCATCCGACATCATTGACTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAAACGTTGGTTAATTTTTCAAACTCTTCACACAAGGTATCAAACCCTTCCATAAAGCTCAGGTTCAACCAGTGCAGCGCATTTTGATTGTTCTTCTCGATAAAACATTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACAGGTTCGGGACATTg > 2:680007/1‑251 (MQ=37) gttgaGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑TCATCCGACTTCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGc < 2:591282/247‑1 (MQ=255) aGGTCGGATAAGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCaga < 1:313785/250‑1 (MQ=255) aGGCGTTT‑‑ACGC‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTg > 2:628611/1‑250 (MQ=255) || CGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTTATGCCGCATCCGACATCAACGCCTGATGCGACGCTTAACGCGTCTTATCAGGCCTACGCCAGACAGCGCAATAGCCTGATTTAGCGTGATTTTGTAGGTCGGATAAGGCGTTT‑‑A‑‑C‑C‑‑GCATCCGACATCAATGCCTGATGCGACGCTTGCCG‑CGTCTTATCAGGCCTATCTTAACCGTTGGTTAATTTTTCAAACTCTTCACACCCGGTATCAAACCCTTCCATACAGCTCAGGTTCAACCAGTGCAGCGCCTTTTGCTTGTTCTTCTCGATAAAACCTTCTTCACCGTTTAAGAACATCATTCCCGCCCAGTACTCGGAATAACCGGTTCGGGAAATTGCAGAGCTGCGTTTG > NC_000913/4296192‑4296619 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |