New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 258675	NA (NA)	53 (1.360)	52/482	0.0	100%	noncoding (1/768 nt)	IS1	repeat region
	?	NC_000913	849240 =	0 (0.000)					coding (858/888 nt)	rhtA	L‑threonine/L‑homoserine exporter

TTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAGAACAATTCTTATTTATCTGCTCGCCAGGAATTTTCGGAATAAATATGCTTTTGCATAATTCGATATATAAAGACGGTGTAGAGGAAAAGTAGCGAGAAATTCTGCATGGTTATGCATAACCATGCAGAAATGTAAATTTAATTAATGTCTAATTCTTTTATTTTGCTCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCGCCGGTTCCATGCTCATCAGCGTACCAAATGTCCGTGTTGGCAAACGGGTGAGGGCAATCATTTCCAGCGAATAAGGCAGAGCGGTCGAGAGAATAGCGACAGCCAGACCCAATGGAATAACCGACCAGT  >  NC_000913/848995‑849487                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                        cgccattcatggccatatcaatgattttctggtgcgtaccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCttt                                                                                                                                                                                                                                                    <  2:43926‑M2/6‑1 (MQ=255) cgccattcatggccatatcaatgattttctggtgcgtaccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCttt                                                                                                                                                                                                                                                    <  1:413434‑M2/6‑1 (MQ=255)        catggccatatcaatgattttctggtgcgtaccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggaagcatcaccCTCTTTGCGTACt                                                                                                                                                                                                                                             >  1:65106‑M2/239‑251 (MQ=255)         atggccatatcaatgattttctggtgcgtaccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctggtgtccggcggtgcttttgccgttacgcaccaccacgtcagtagctgacacggggggacagctgatagaaacagaagccactggagcacctccaaaacaccatcatacactaaatcagtaaattggccgcatcaccCTCGTTGCGTACTg                                                                                                                                                                                                                                            >  2:317775‑M2/238‑251 (MQ=255)               atatcaatgattttctggtgcgtaccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCg                                                                                                                                                                                                                                      <  1:134511‑M2/20‑1 (MQ=255)               atatcaatgattttctggtgcgtacagggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgcgagcagagctagcgctgatgtccggcggtgcttttgccgttacgcacccccccgtcagtagctggacaggagggaccgctgatagaaacagaagcccctggagcacctcaaacaccacatcataacctaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGGcaggg                                                                                                                                                                                                                                      >  2:53250‑M2/232‑249 (MQ=255)                     atgattttctggtgcgtaccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGAcc                                                                                                                                                                                                                                <  1:156313‑M2/26‑1 (MQ=255)                           tgctggtgcgtaccaggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCACAtt                                                                                                                                                                                                                           <  1:256483‑M2/31‑1 (MQ=255)                            tctggtgcgtaccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtaagtagctgaacaggagggacagatgatagaaacagaagccactggggcaccccaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGCCAGCGTAGATCCCATTg                                                                                                                                                                                                                          >  2:144744‑M2/219‑250 (MQ=255)                             ctggtgcgtaccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatccccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGa                                                                                                                                                                                                                         >  2:109280‑M2/218‑250 (MQ=255)                               ggtgcgtaccgggttgagaagcggtgtaagtgaactgcagttgccattttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagtgacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAgc                                                                                                                                                                                                                      >  1:103645‑M2/216‑251 (MQ=255)                               ggtgcgtaccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGaa                                                                                                                                                                                                                        <  1:325945‑M2/34‑1 (MQ=255)                                    gtaccgggttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTTCGTACTGTCAGCGTAGACCCCATTGAAgaggcg                                                                                                                                                                                                                  >  2:126673‑M2/211‑250 (MQ=255)                                           gttgagaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAgc                                                                                                                                                                                                          >  1:27359‑M2/204‑251 (MQ=255)                                           gttgagaagcggtggaagtgatcggcgattgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccggtacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAgc                                                                                                                                                                                                          <  2:282142‑M2/48‑1 (MQ=255)                                               agaagcggtgtaagtgaactgcagttgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCg                                                                                                                                                                                                      >  1:84344‑M2/200‑251 (MQ=255)                                                            gtgaactgcaggtgccatgttttacggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCt                                                                                                                                                                                         <  1:260526‑M2/65‑1 (MQ=255)                                                                                 ttacggcagtgagagaagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCCGGGTTtctc                                                                                                                                                                    >  2:165426‑M2/166‑251 (MQ=255)                                                                                    cggcagtgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGa                                                                                                                                                                 <  1:33217‑M2/89‑1 (MQ=255)                                                                                          tgagagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGaaa                                                                                                                                                            >  1:321181‑M2/157‑250 (MQ=255)                                                                                             gagcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGCTGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAatc                                                                                                                                                         >  1:361692‑M2/154‑250 (MQ=255)                                                                                               gcagagatagcgctgatgtccggcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAatcatc                                                                                                                                                      >  1:45303‑M2/152‑251 (MQ=255)                                                                                                      aagcgctgatgtccggcggtgcttttgccgttacgccccaccccgacagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGaaa                                                                                                                                               <  2:120095‑M2/107‑1 (MQ=255)                                                                                                             gatgtccggcggtgcttttgccgttacgcacccccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactgtagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGca                                                                                                                                          <  1:219704‑M2/112‑1 (MQ=255)                                                                                                               ggtccgggggtgcttttgccggtacgccccaccccgtcagtagctgaacaggagggacagctgatagaaacagatgccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTCCTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCAACCCGGAAACGGcagcca                                                                                                                                      <  2:215347‑M2/116‑1 (MQ=255)                                                                                                                    ggcggtgcttttgccgttacgcacccccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCGcc                                                                                                                                 <  2:84344‑M2/121‑1 (MQ=255)                                                                                                                     gcggtgcttttgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCGCCg                                                                                                                                <  1:335100‑M2/122‑1 (MQ=255)                                                                                                                               tgccgttacgcaccaccccgtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTTAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCGCCGGTTCCATGc                                                                                                                       <  1:53250‑M2/131‑1 (MQ=255)                                                                                                                                gccgttacgcaccaccccgtcatgagctgaacaggagtgacagctgatagaaacagaagccactggagcaccccaaaaacaccatcatacactaaatcagtaagttggcagcatcaacCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGAAGCTGTATGGGTGTCAGTTTTTCTCCGAGGAAAATCATCCCGGAAACGGCATCCAGCGCCGGTTCCATGCt                                                                                                                      <  2:231803‑M2/132‑1 (MQ=255)                                                                                                                                                              acaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCGCCGGTTCCATGCTCATCAGCGTACCAAATGTCCGTGTTGGCaa                                                                                        >  1:68410‑M2/89‑250 (MQ=255)                                                                                                                                                                       acagctgatagaaacagaagccactggagcacctcaaaaacaccataatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGAGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCGCCGGGTCCATGCTCATCCGCGTACCAAATGTCCGTGTTGGCACACGggtgcgg                                                                              >  2:136326‑M2/80‑248 (MQ=255)                                                                                                                                                                           ctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaagtcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCGCCGGTTCCATGCTCATCAGCGTACCAAATGTCCGTGTTGGCAAACGGGTGAGGGCa                                                                           >  2:156734‑M2/76‑250 (MQ=255)                                                                                                                                                                                agaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCGCCGGTTCCATGCTCATCAGCGTACCAAATGTCCGTGTTGGCAAACGGGTGAGGGCAATCAt                                                                      <  1:366689‑M2/180‑1 (MQ=255)                                                                                                                                                                                      agaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCGCCGGTTCCATGCTCATCAGCGTACCAAATGTCCGTGTTGGCAAACGGGTGAGGGCAATCATCTCCAGc                                                               >  1:29243‑M2/65‑251 (MQ=255)                                                                                                                                                                                                ggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCGCCGGTTCCATGCTCATCAGCGTACCAAATGTCCGTGTTGGCAAACGGGTGAGGGCAATCATTTCCAGCGAATAAGGc                                                      >  2:155435‑M2/55‑250 (MQ=255)                                                                                                                                                                                                 gagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCGCCGGTTCCAGGCTCATCAGCGTACCAAATGTCCGTGTTGGCAAACGGGTGAGGGCAATCATTTCCAGCGAATAAGGCag                                                    <  2:168488‑M2/198‑1 (MQ=255)                                                                                                                                                                                                    cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCGCCGGTTCCATGCTCATCAGCGTACCAAATGTc                                                                                                   <  1:23484‑M2/151‑1 (MQ=255)                                                                                                                                                                                                    cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCGCCGGTTCCATGCTCATCAGCGTACCAAATGTCCGTGTTGGCAAACGGGTGAGGGCAATCATTTCCAGCGAATAAGGCAGAGc                                                 <  2:251877‑M2/201‑1 (MQ=255)                                                                                                                                                                                                    cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCGCCGGTTCCATGCTCATCAACGTCCCAAATGTc                                                                                                   >  2:23484‑M2/51‑201 (MQ=255)                                                                                                                                                                                                         caaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCGCCGGTTCCATGCTCATCAGCGTACCAAATGTCCGTGTTGGCAAACGGGTGAGGGCAATCATTTCCAGCGAATAAGGCAGAGCGGTCg                                            <  2:27359‑M2/206‑1 (MQ=255)                                                                                                                                                                                                         caaaaaaaacatcatacactaaatccgtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGAGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTACGAGGAAAATCATCCCGGAAACGGCAGCCAGCGCCGGTTCCATGCTCATCAGCGTACCAAATGTCCGTGTTGGCAAACGGGTGAGGGCAATCATTTCCAGCGAATAAGGCAGagcgggcg                                            >  2:237604‑M2/46‑248 (MQ=255)                                                                                                                                                                                                          aaaaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCGCCGGTTCCATGCTCATCAGCGTACCAAATGTCCGTGTTGGCAAACGGGTGAGGGCAATCATTTCCAGCGAATAAGGCAGAGCGGTCga                                           <  1:109280‑M2/207‑1 (MQ=255)                                                                                                                                                                                                            aaacaccatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCGCCGGTTCCATGCTCATCAGCGTACCAAATGTCCGTGTTGGCAAACGGGTGAGGGCAATCATTTCCAGCGAATAAGGCAGAGCGGTCgaga                                         <  1:193405‑M2/209‑1 (MQ=255)                                                                                                                                                                                                                accatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCGCCGGTTCCATGCTCATCAGCGTACCAAATGTCCGTGTTGGCAAACggg                                                                                   >  2:20473‑M2/39‑205 (MQ=255)                                                                                                                                                                                                                accatcatacactaaatcagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCGCCGGTTCCATGCTCATCAGCGTACCAAATGTCCGTGTTGGCAAACggg                                                                                   <  1:20473‑M2/167‑1 (MQ=255)                                                                                                                                                                                                                   atcatacactaaatcaggaagttggcagcatcaccCTCTTTGCGTACTGGCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCGCCGGTGCCATGCTCATCAGCGTACCAAATGTCCGTGTTGGCAAACGGGTGAGGGCAATCATTTCCAGCGAATAAGGCAGAGCGGGCGAGAGAATAGc                                  <  2:45303‑M2/216‑1 (MQ=255)                                                                                                                                                                                                                                 cagtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCGCCGGTTCCATGCTCATCAGCGTACCAAATGTCCGTGTTGGCAAACGGGTGAGGGCAATCATTTCCAGCGAATAAGGCAGCGCGAGCGAGAGAATAGCGACAGCCAGAccc                     >  2:288535‑M2/22‑250 (MQ=255)                                                                                                                                                                                                                                  agtaagttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCGCCGGTTCCATGCTCATCAGCGTACCAAATGTCCGTGTTGGCAAACGGGTGAGGGCAATCATTTCCCGCGAATAAGGCAGCGCGGTCGAGCGAATAGCAACAGCCAGCCCCa                    >  2:230401‑M2/21‑250 (MQ=255)                                                                                                                                                                                                                                    taagttggcagaatcacaCTCTTTGCGTACTGTCCGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTCGCTGTATGGGTGTCAGTGTTTCTCCGAGGGAAATCATCCCGGAAACGGCAGCCAGCGCCGGTTCCATGCTCATCAGCGTACCAAATGTCCGTGTTGGCAAACGGGTGAGGGCACTCATTTCCAGAGAATAAGGCAGAGCGGTCGAGAGAATAGCGACAGCCAGCCCCAATg                 >  2:383064‑M2/19‑251 (MQ=255)                                                                                                                                                                                                                                       gttggcagcatcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCGCCGGTTCCATGCTCATCAGCGTACCAAATGTCCGTGTTGGCAAACGGGTGAGGGCAATCATTTCCAGCGAATAAGGCAGAGCGGTCGAGAGAATAGCGACAGCCAGACCCAATGGaa              <  1:165426‑M2/236‑1 (MQ=255)                                                                                                                                                                                                                                                atcaccCTCTTTGCGTACTGTCAGCGTAGACCTCACGGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGtt                                                                                                                                                                        <  2:16503‑M2/82‑1 (MQ=255)                                                                                                                                                                                                                                                atcaccCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGACGAGCGCCAGTAGCTGTATGGGTGTCAGTGtt                                                                                                                                                                        >  1:16503‑M2/7‑88 (MQ=255)                                                                                                                                                                                                                                                   cccCTCGTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCGCCGGTTCCATGCTCATCAGCGTACCAAATGTCCGTGTTGGCAAACGGGTGAGGGCAATCATTTCCAGCGAATAAGGCAGAGCGGTCGAGAGAATAGCGACAGCCAGACCCAATGGAATAACCGACCAGt  <  2:68410‑M2/248‑1 (MQ=255)                                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                                        TTCCTATCACACTAATAGTGGTAACAAGCGTGAAAAACAAAACTAATAAAGATTCAATGAGTTAGATATATTGATAAGAACAATTCTTATTTATCTGCTCGCCAGGAATTTTCGGAATAAATATGCTTTTGCATAATTCGATATATAAAGACGGTGTAGAGGAAAAGTAGCGAGAAATTCTGCATGGTTATGCATAACCATGCAGAAATGTAAATTTAATTAATGTCTAATTCTTTTATTTTGCTCTCTTTGCGTACTGTCAGCGTAGACCCCATTGAAGCGGCGATGATAGCGCCGAGCGCCAGTAGCTGTATGGGTGTCAGTGTTTCTCCGAGGAAAATCATCCCGGAAACGGCAGCCAGCGCCGGTTCCATGCTCATCAGCGTACCAAATGTCCGTGTTGGCAAACGGGTGAGGGCAATCATTTCCAGCGAATAAGGCAGAGCGGTCGAGAGAATAGCGACAGCCAGACCCAATGGAATAACCGACCAGT  >  NC_000913/848995‑849487

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.