Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 2,913,392 IS2 (–) +5 bp coding (256‑260/2235 nt) relA ← GDP/GTP pyrophosphokinase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2913392 =0 (0.000)38 (0.970) 35/482 0.2 100% coding (260/2235 nt) relA GDP/GTP pyrophosphokinase
?NC_000913 = 2997691 NA (NA)noncoding (1/1331 nt) IS2 repeat region
* ? NC_000913 = 29133960 (0.000)32 (0.820) 29/482 0.4 100% coding (256/2235 nt) relA GDP/GTP pyrophosphokinase
?NC_000913 2996361 = NA (NA)noncoding (1331/1331 nt) IS2 repeat region

CGCATCTTTTACTTCGCGCAGATGAGCAATACGCTCCGCCAGTTTGATGACTACGCAGCGAAAATCATCGACCATCGCCAATAACATCCGGCGAACGTTATCGACCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTCTGGCTGGTAATACCCAGACTTGCGATCCATTTTTCCGGATCAAATTCACCAGCCTTATTGATATGTGCACTTCTTA  >  NC_000913/2913154‑2913641
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                         
ccagagaaataactggctggctgctacaccatgttgccgggcaacgagggagaccgccatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGccagcg                                                                                                                                                                                                                                               <  1:231041‑M1/13‑3 (MQ=255)
         tcctacccgcAGATGAGCAATACGCTCCGCATGTTTGAGGACTACGCAGCGAAAATCATCAGCCTCCGCCATTAACATCCGGCTAACGTTAACGCCCTGTGCGGAGAAAACAGAAACAGTGGGCGTCGCGTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCGACTTACCGACGCGCTCACGCAGCACATCTTCGCTGACTTCGTTGGCATctggatttgcccctata                                                                                                                                                                                                                                       <  1:195450/243‑17 (MQ=255)
                       gAGCAATACGCTCCGCCAGTTTGATGACTACGAAGCGAAAATCACCGACCATCGCCAAAAACATCCGGCGAACGTTATCGACCTGTTCGGAGGAAACAGAATCAGTGGGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgt                                                                                                                                                                                                                        <  1:26766‑M1/251‑32 (MQ=255)
                           aatacgccccccaattttgtggactacgcagcaaaaaccatcgaCCATCGCCAATAACATCCGGCGAACGTTACCGCCCGGTTCGGAGGAAACAGAACCAGTGTGCTTCGCTTTCAGCGGGCGGACCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatc                                                                                                                                                                                                                    <  2:67710‑M1/230‑36 (MQ=255)
                              atgttgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagccatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCa                                                                                                                                                                                                                  <  1:263931‑M1/42‑1 (MQ=255)
                                  tgccgggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTc                                                                                                                                                                                                             <  1:111415‑M1/47‑1 (MQ=255)
                                   ccGCCAGTTTTATGACTCCGCAGCGAAAATCATCGAACATCGCCACTAACATCCGGCGAACGTTATCGACCTGTTCGGAGGAAACAGAATCAGTGTGCTTCGCTTTCAGCTGGCGGATCGCCGCCATCTCACGCACGCCGTGAATAAGGTTCACGACCGACTTACCGACGCTCTAACGCAGCACATCTTCGCTGACTACGGAGGCATCtggatttgcccctatatttccagacatcttttataaattaacc                                                                                                                                                                                                            >  2:369135‑M1/1‑208 (MQ=255)
                                      gggcaacgagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGCGTCAATGTCCAt                                                                                                                                                                                                          <  1:54857‑M1/50‑1 (MQ=255)
                                             gatgaCTACGCAGCGAAAATCATCGACCATCGCCAATAACATCCGGCGAACGTTATCGACCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagc                                                                                                                                                                                                  >  1:153804‑M1/1‑198 (MQ=255)
                                             gagggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATg                                                                                                                                                                                                  <  2:312587‑M1/58‑1 (MQ=255)
                                                ggagaccgtcatccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCg                                                                                                                                                                                               <  1:351073‑M1/61‑1 (MQ=255)
                                                gaCTACGCAGCGAAAATCATCGACCATCGCCAATAACATCCGGCGAACGTTATCGACCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccg                                                                                                                                                                                               >  1:257248‑M1/1‑195 (MQ=255)
                                                         catccccggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGAtc                                                                                                                                                                                       >  1:26444‑M1/182‑250 (MQ=255)
                                                                tcatcGCCCATCGCCAATAACATCCGGCGAACGTTATCGACCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCGACTTACCGACGCCCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggttttacccctatctttccagacatctgttatcacttaacccattacaagcccgctgccgcagatcttcc                                                                                                                                                                               >  2:401949‑M1/1‑179 (MQ=255)
                                                                ggttcaaagctctgctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCAt                                                                                                                                                                               <  1:205440‑M1/77‑1 (MQ=255)
                                                                     gACCATCGCCAATAACATCCGGCGAACGTTATCGCCCTGTTCGGAGGAAACAGACTCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttctcacttaacccattacaagcccgctgccgcagatattcccgtgg                                                                                                                                                                          >  2:382469‑M1/1‑174 (MQ=255)
                                                                         aTCGCCAATAACATCCGGCGAACGTTATCGACCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTAAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCGCCTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcg                                                                                                                                                                        >  2:50993‑M1/1‑170 (MQ=255)
                                                                             gctgaacaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGAGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTAGAGAGGATCTCCACCATCTCAACACCACGc                                                                                                                                                                  <  2:284591‑M1/90‑1 (MQ=255)
                                                                                  acaattgcgatcttttcctgtgtggtacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCTCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCcaca                                                                                                                                                              <  1:228474‑M1/94‑1 (MQ=255)
                                                                                            gAACGTTATCGACCTATTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgcgcgataacccagcgcactat                                                                                                                                                   >  1:310145‑M1/1‑151 (MQ=255)
                                                                                               tttcctgtgtggtacgccgtcgtcgtttctccggccctaagacatcaatcacctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCCCCATCTCATCACCACGCCACAATAACAGa                                                                                                                                                      >  1:271704‑M1/144‑245 (MQ=255)
                                                                                                       gtggtacgccgtctgcgtttctccggccataagccatcaatcatctgtcctccaatgtctagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCCTCCGGAt                                                                                                                                         >  1:65016‑M1/136‑250 (MQ=255)
                                                                                                       aCCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccat                                                                                                                                        >  1:104763‑M1/1‑140 (MQ=255)
                                                                                                           tacgccgtctgcgtttctccggccctaagacatcaatcatctgttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGcccc                                                                                                                                    <  1:202713‑M1/120‑1 (MQ=255)
                                                                                                                  gctgcgtttctccggcccaaagacaacaataatcggttctccaaggactagtctaaaaactagtattaagactgtcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCAGCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCCCCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCt                                                                                                                             >  2:287304‑M1/125‑251 (MQ=255)
                                                                                                                         ttctccggccctaagacctcaatcaacttttccccaatgactagtctaaaaactagtattaaaactaacacttatttaagttatttttgttggctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCTCAGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCTGATGCCCCTGCGTCTGTTGCa                                                                                                                       >  1:258312‑M1/118‑250 (MQ=255)
                                                                                                                              gtgtggcgtcgtttttggcgggcggaccgccgccatatctcgCCCGCCGTGAATAAGGTTAACTACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGTCTACGTTGGCATCtggatttgcccctatattcccagacatctgttatcccttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcacgatgcggagtccattcgttataatgcgcgaacgcctc                                                                                                                 <  2:46488‑M1/231‑135 (MQ=255)
                                                                                                                                       gacatcaagcatctgttctccaatgactattctaaaaactagtattaagactatcacttatttaagggatattggttgtctggagactcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCCCAACCCCACGCCACAATAACAGACTGGCATCCGGATGACCCTGCGTCTGTTGCAGACAATCCGCTCAgg                                                                                                        >  2:315537‑M1/104‑251 (MQ=255)
                                                                                                                                        gCTTTCAGCTGGCGGATCGCAGCCATATCACGCACGCCGAGAATAAGGATAACGGCCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacacgcccgctgccgcagatattcacgtggcgagcgataacccagcgcacaatgcggatgccattcgttataaggctcgaacgcctctccaaggttc                                                                                                       >  2:303313‑M1/1‑107 (MQ=255)
                                                                                                                                           ccaatcatctgttctccaatgcctagtctaaaaactagtattaagactatcacttatttaagggatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTc                                                                                                    >  2:351073‑M1/100‑251 (MQ=255)
                                                                                                                                            tCAGCTGACGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCGAATTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatcttcccgtggcgcgcgataaccccgcgcactatgcggatgccattcgttataatgctcgaccgcctctgcacggttctttg                                                                                                   >  2:50917‑M1/1‑103 (MQ=255)
                                                                                                                                            caatcatcggttctccaatgactagtctaaaaactagtattaagactagcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTc                                                                                                    >  2:205440‑M1/99‑250 (MQ=255)
                                                                                                                                              aGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgctaacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgct                                                                                                 >  2:230816‑M1/1‑101 (MQ=255)
                                                                                                                                              aGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggc                                                                                                                                                                         >  1:383697‑M1/1‑101 (MQ=255)
                                                                                                                                                     gttctccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCa                                                                                           >  1:365371‑M1/90‑250 (MQ=255)
                                                                                                                                                        gtccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACtcc                                                                                       <  2:89188‑M1/165‑2 (MQ=255)
                                                                                                                                                         tccaatgactagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGCCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTcac                                                                                      <  2:36816‑M1/166‑1 (MQ=255)
                                                                                                                                                               gattagtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggaaattcagggggccagtctaTCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGGCCATACTTAAGGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACt                                                                                >  1:390816‑M1/80‑251 (MQ=255)
                                                                                                                                                                actagtctaaaaactagtattaagactatcacttatttaagtgatattggatgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACtt                                                                               <  2:218279‑M1/173‑1 (MQ=255)
                                                                                                                                                                   agtctaaacactagtattaacactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGACAATCAGCGCCGACCGCAGCGTGTAAATGTCCATACTTAATGTCGCGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACAAGCATCCGGATGCCCCTGCGTCTGTTGCAGCCAATACGCCCAGGTTTCGGCTACACACTCACCCGACTTctg                                                                            <  2:273280‑M1/176‑1 (MQ=255)
                                                                                                                                                                   agtctaaaaactagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTctg                                                                            <  1:136560‑M1/176‑1 (MQ=255)
                                                                                                                                                                    cacgcacgCCGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtcttgtttg                                                                            <  1:330777‑M1/250‑172 (MQ=255)
                                                                                                                                                                     acgcacgcCGTGAATAAGGTTAACGACCGCCTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttggg                                                                          >  1:122673‑M1/1‑78 (MQ=255)
                                                                                                                                                                       taaaaactagtattaagactatcccttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCTCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCAATCACACGACTTctggct                                                                         >  2:228474‑M1/72‑250 (MQ=255)
                                                                                                                                                                             ctagtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTCTGGCTGGTAAt                                                                   <  1:321491‑M1/185‑1 (MQ=255)
                                                                                                                                                                               agtattaagactatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTCTGGCTGGTAATAcc                                                                <  2:190002‑M1/188‑1 (MQ=255)
                                                                                                                                                                                     aGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttatttgctgccgttaacacgtctggtttgggcatgatactgatgtag                                                          <  1:203687‑M1/251‑190 (MQ=255)
                                                                                                                                                                                       gTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtc                                                        <  2:104763‑M1/251‑192 (MQ=255)
                                                                                                                                                                                          tatcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTCTGGCTGGTAATACCCAGACTTGCg                                                      <  1:413419‑M1/198‑1 (MQ=255)
                                                                                                                                                                                           atcacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTCTGGCTGGTAATACCCAGACTTGCGAt                                                    <  1:404493‑M1/200‑1 (MQ=255)
                                                                                                                                                                                             cacttatttaagtgatattggttgtctggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTCTGGCTGGTAATACCCAGACTTGCGATcc                                                  <  1:71478‑M1/202‑1 (MQ=255)
                                                                                                                                                                                             cacttatttaagtgatattggttgtcgggagattcagggggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCGCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTCTGGCTGGTAATACCCAGACTTGCGATc                                                   >  1:333908‑M1/50‑250 (MQ=255)
                                                                                                                                                                                             cacttattaaagtgatattggttgtctgtagattcggggggccagtcttGCATCCGCCAGAGGAAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCCCCTCCATCTCAACCCCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGTCCAGGTTTCGGCTAAGCCCTCACACGACTTCTGGCTGTTAATACCCAGACTTGCGATcc                                                  >  2:114823‑M1/50‑251 (MQ=255)
                                                                                                                                                                                                cgacTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttat                                               >  1:300020‑M1/1‑51 (MQ=255)
                                                                                                                                                                                                  acTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcg                                             >  1:273481‑M1/1‑49 (MQ=255)
                                                                                                                                                                                                      aCCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgtttt                                         >  1:376282‑M1/1‑45 (MQ=255)
                                                                                                                                                                                                               ggtgtgtctggggattcagggggccagtctaGCAGCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACCCCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGGTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTCTGGCTGGTAATACCCAGACTTGCGATCCATTTTTCCGGATCAAAtt                                >  2:404493‑M1/32‑251 (MQ=255)
                                                                                                                                                                                                                      atcacatcTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagagcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgct                         >  1:52622‑M1/3‑29 (MQ=255)
                                                                                                                                                                                                                      agcaCATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttat                                               >  1:381072‑M1/1‑29 (MQ=255)
                                                                                                                                                                                                                      agcaCATCTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttat                                               <  2:381072‑M1/229‑201 (MQ=255)
                                                                                                                                                                                                                           atcctcgctGACTACGGTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattcc                    <  2:92173‑M1/247‑228 (MQ=255)
                                                                                                                                                                                                                             cTTCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgt                  >  1:91495‑M1/1‑22 (MQ=255)
                                                                                                                                                                                                                               tCGCTGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccatgacaagcccgctgccgcagatattcccgtggcgagcgatagcccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccg                   <  1:241168‑M1/248‑229 (MQ=255)
                                                                                                                                                                                                                                 ccttactctgtgggcatatggatttgcccctatatttccagttacctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgcgcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgttact              <  2:226617‑M1/239‑234 (MQ=255)
                                                                                                                                                                                                                                   tGACTACGTTGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgttactct            >  1:193612‑M1/1‑16 (MQ=255)
                                                                                                                                                                                                                                   gggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTCTGGCTGGTAATACCCAGACTTGCGATCCATTTTTCCGGATCAAATTCACCAGCCTTATTGATAtgt            <  2:11633‑M1/240‑1 (MQ=255)
                                                                                                                                                                                                                                    ggccagtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTCTGGCTGGGAATACCCAGACTTGCGATCCATTTTTCCGGATCAAATTCACCAGCCTTATTGATAtgtg           >  1:176548‑M1/11‑251 (MQ=255)
                                                                                                                                                                                                                                        agtctaGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCACCACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTCTGGCTGGTAATACCCAGACTTGCGATCCATTTTTCCGGATCAAATTCACCAGCCTTATTGATATGTGCAct       <  1:241472‑M1/245‑1 (MQ=255)
                                                                                                                                                                                                                                           ttGGCATCtggatttgcccctatatttccagacatctgttatcacttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataacccagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtctggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgttactctccggactc    >  1:62408‑M1/1‑8 (MQ=255)
                                                                                                                                                                                                                                            gaGCACCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGCCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTCTGGCTGGTAATACCCAGACTTGCGATCCATTTTTCCGGATCAAATTCACCAGCCTTATTGATATGTGCActtctt   >  2:202713‑M1/3‑251 (MQ=255)
                                                                                                                                                                                                                                             ggCATCtggatttgcccctatatttccagacatctgttatcccttaacccattacaagcccgctgccgcagatattcccgtggcgagcgataaccaagcgcactatgcggatgccattcgttataatgctcgaacgcctctgcaaggttctttgctgccgttaacccgtatggtttgggcatgatactgatgtagtcacgctttatcgttttcacgaagctctctgctattccgttactctccggactccg  >  1:377204‑M1/1‑6 (MQ=255)
                                                                                                                                                                                                                                              |                                                                                                                                                                                                                                                         
CGCATCTTTTACTTCGCGCAGATGAGCAATACGCTCCGCCAGTTTGATGACTACGCAGCGAAAATCATCGACCATCGCCAATAACATCCGGCGAACGTTATCGACCTGTTCGGAGGAAACAGAATCAGTGTGCGTCGCTTTCAGCTGGCGGATCGCCGCCATATCACGCACGCCGTGAATAAGGTTAACGACCGACTTACCGACGCTCTCACGCAGCACATCTTCGCTGACTACGTTGGCATCCGCCAGAGGGAAAAGCAGCGCCGCCCGCAGCGTGTCAATGTCCATACTTAATGTCGAGAGGATCTCCACCATCTCAACACCACGCCACAATAACAGACTGGCATCCGGATGCCCCTGCGTCTGTTGCAGACAATACGCCCAGGTTTCGGCTAAGCACTCACACGACTTCTGGCTGGTAATACCCAGACTTGCGATCCATTTTTCCGGATCAAATTCACCAGCCTTATTGATATGTGCACTTCTTA  >  NC_000913/2913154‑2913641

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.