Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	NC_000913	1,293,196	IS5 (+) +4 bp	intergenic (‑274/‑328)	hns ← / → tdk	DNA‑binding transcriptional dual regulator H‑NS/thymidine/deoxyuridine kinase

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1293196 =	2 (0.050)	20 (0.510)	18/482	1.0	90.8%	intergenic (‑274/‑331)	hns/tdk	DNA‑binding transcriptional dual regulator H‑NS/thymidine/deoxyuridine kinase
	?	NC_000913	= 1300693	NA (NA)					noncoding (1195/1195 nt)	IS5	repeat region
*	?	NC_000913	= 1293199	2 (0.050)	14 (0.360)	13/482	1.6	87.3%	intergenic (‑277/‑328)	hns/tdk	DNA‑binding transcriptional dual regulator H‑NS/thymidine/deoxyuridine kinase
	?	NC_000913	1299499 =	NA (NA)					noncoding (1/1195 nt)	IS5	repeat region

GGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCC  >  NC_000913/1292948‑1293437                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                  ggtgggTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGTAATTCAAAATTGTGCTTTATTGTGTTCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCGTTCAGTCTTCTGTATTa                                                                                                                                                                                                                                                 <  1:338196/251‑1 (MQ=255)         gctgaaaaacgataaccaactggcgatgttattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTgtgt                                                                                                                                                                                                                                          >  2:155197‑M1/241‑250 (MQ=255)             aaaaacgataaccaactggcgatgttattcacgctggccaacctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACg                                                                                                                                                                                                                                     <  1:107824‑M1/15‑1 (MQ=255)                 aataatAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGTCCTATTTACACCGATGATTTCGCGGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTAGCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaa                                                                                                                                                                                                                                 <  1:186691‑M1/251‑16 (MQ=255)                                        tgtgCAATAGCCAGTAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTAGCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtt                                                                                                                                                                                                           <  1:239133‑M1/250‑38 (MQ=255)                                                       ctgtttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTAACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGc                                                                                                                                                                                           <  1:263662‑M1/57‑1 (MQ=255)                                                          gttcgggcggaccaaatgatacgtcagtgggagagatctcactaaaaactggggataacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgaggcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAAt                                                                                                                                                                                        >  1:417125‑M1/192‑251 (MQ=255)                                                                     ccaaatgatacgtcagtgggagagatcacactaaaaacgtgggataactcctgaaatggcgaagaaacgggctaaataggctgatgcaatgcatttacgtgagaaaaaagcggctcaaacatgaagaaaggaaatgactgagtcagcctataagaatttccccgcttattctcaccttccTTAGGTGTGTTTACTAGAAGTTCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGa                                                                                                                                                                             >  2:282069‑M1/181‑251 (MQ=255)                                                                             tcttttatttgtgctgcCAATATAAATCTTTTCATAAAATTAGCCAGTAAAGACGCGGAATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTCTGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaagttgcgaacaagttcttgctatgagatcatgtttgtcatctggagccatagcacagggttcttcatgagtc                                                                                                                                                                     >  2:73518‑M1/8‑176 (MQ=255)                                                                               cgtcagttggcaagatctcactaataactggggctaacgccttaaatggcgaagaaacggtctaaataggctgattcaaggcatttacgggagcaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGAAATAAGCGAATGGACTTAGTATTg                                                                                                                                                                   <  2:50804‑M1/81‑1 (MQ=255)                                                                                     ttGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaactt                                                                                                                                                             >  1:345801‑M1/1‑168 (MQ=255)                                                                                                 cactaacaactggggataacgccttaaatggcgacgaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTc                                                                                                                                                 <  2:127528‑M1/99‑1 (MQ=255)                                                                                                     aaaaactggggataacgccttaaatggcgaagaaacgttctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACa                                                                                                                                             >  1:263961‑M1/149‑251 (MQ=255)                                                                                                         ttttCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAgg                                                                                                                                         >  1:183322/1‑251 (MQ=255)                                                                                                           tggggataacgccttaaatggcgaagaaacggtctaaatcggctgattaaaggcatttacgggagaaaaaataggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAAAGCATGGACTTAGTATTGCAATATCTCCTGGAGGTCAACAGGGGGc                                                                                                                                       <  2:369079‑M1/109‑1 (MQ=255)                                                                                                                   aTTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGCTTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaagttgcgaacaagtccctgatatgagatcatgtttg                                                                                                                                                                                                         >  2:106514‑M1/1‑138 (MQ=255)                                                                                                                   aTTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttg                                                                                                                                                                                                         <  1:106514‑M1/177‑40 (MQ=255)                                                                                                                       gCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgcc                                                                                                                           >  1:312435‑M1/1‑134 (MQ=255)                                                                                                                       cttaaatggcgcagaaacggtctaactaggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgaaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGCGCATGAACTTAGTATTGCACAATCTCCTGGAGGTCAACAGAGGGATAttacttacgc                                                                                                                           <  2:182610‑M1/121‑5 (MQ=255)                                                                                                                               gcgaagaaacggtctaaataggctgattcaaggcatttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGtt                                                                                                                   >  1:288078‑M1/123‑251 (MQ=255)                                                                                                                                gACGCGGCATATAGCCCTATATACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagaccctgatatgagatcatgtttgtcatctggagccataaaacagggttcatcatgagtcattaacttaccttcgccaacagtgaattaagcagtaagcgccgtcagacc                                                                                                                   >  2:353471‑M1/1‑125 (MQ=255)                                                                                                                                  cgcgGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccaga                                                                                                                <  1:296657‑M1/251‑129 (MQ=255)                                                                                                                                           taGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagatt                                                                                                       >  1:379730‑M1/1‑114 (MQ=255)                                                                                                                                              aaataggctgattcaaggcatttacgggagaaaaaagcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGTCTTAGTATTGCACTATCTCCGGGAGGGCAACAGAGGGCTATTACTTGAGCAACAGGTTAAAGATTGTGAATa                                                                                                     >  1:143087‑M1/108‑250 (MQ=255)                                                                                                                                                  aTTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgt                                                                                                <  1:176379‑M1/251‑145 (MQ=255)                                                                                                                                                  aTTTACACCGAAGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTTGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGAATAGTTAc                                                                                                <  2:197188/251‑1 (MQ=255)                                                                                                                                                               gcctttacgggagaaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAAAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGAATAGTTACCAGCAGTCatttt                                                                                   <  2:298711‑M1/161‑2 (MQ=255)                                                                                                                                                                 atttacgggcgcaaaaatcggctcaaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCACTAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTCCTTGCGCAAAAGGTTAAAGATTGTGAATAGTTACCAGCAGTCATTTAcc                                                                                 <  2:181982‑M1/163‑1 (MQ=255)                                                                                                                                                                                        caaacatgaagaaatgaaatgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGAAACAGGTTAAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGtt                                                          >  1:357494‑M1/66‑251 (MQ=255)                                                                                                                                                                                                aagaaatgaaatgacggagtcagccgagaagaatttccccgcttattcgcacctcacTTAGTTGTGTTATCGAGAATACCCTATTAAGCGAATGATGAAAAGGAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATGGTGAATAGTTAACAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGAt                                                  >  2:107824‑M1/58‑251 (MQ=255)                                                                                                                                                                                                           tgactgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAACTCAGAAgg                                       <  2:267176‑M1/205‑1 (MQ=255)                                                                                                                                                                                                               tgagtcagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACCGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGTTAGCTCAGAAGGAtt                                    <  1:351343‑M1/208‑1 (MQ=255)                                                                                                                                                                                                                 agacagccgagaagaatttccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATg                                 <  1:357204‑M1/211‑1 (MQ=255)                                                                                                                                                                                                                         aTCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGggaaggtgcgaacaaggccctgatatgagatcatgtttgtcagctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctgg                          <  2:355990‑M1/250‑215 (MQ=255)                                                                                                                                                                                                                              aaattaccccgcttattcgcaccttccTTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTaa                    >  2:38393‑M1/28‑251 (MQ=255)                                                                                                                                                                                                                                   gccccacgtattcgcaccttccttAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCACCTGGAGATAAACAGAGGGCTATTACTTGCGCAGCAGGTTAAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTAGAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGga                <  1:174357/228‑1 (MQ=255)                                                                                                                                                                                                                                         cTTTCAGTCTTCTGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgacctt         >  1:352677‑M1/1‑20 (MQ=255)                                                                                                                                                                                                                                                tcttctGTATTAGggaaggtgcgaacaagtccctgatatgagatcatgtttgtcatctggagccatagaacagggttcatcatgagtcatcaacttaccttcgccgacagtgaattcagcagtaagcgccgtcagaccagaaaagagattttcttgtcccgcatggagcagattctgccatggcaaaacatggtggaagtcatcgagccgttttaccccaaggctggtaatggccggcgaccttatccgct  >  1:392177‑M1/1‑13 (MQ=255)                                                                                                                                                                                                                                                         |                                                                                                                                                                                                                                                  GGTGGTTTGTTGAGGTAATAATAGAGCCTTAAATTCAGTTGTGCAATAGCCAGGAATGTAAGGAATTCAAAATTGTTCTTTATTTTGTGCCGCCAATAAATATCTTTTCATAAAATTAGCCAGAAAAGACGCGGCATATAGCCCTATTTACACCGATGATTTCGCAGCACGTGAGGTTAAAACTTCCTGATTCATGTCACATTTTATGGGGAGATTATCGTAGGCTGACGACCTTTCAGTCTTCTGTATTAGTTGTGTTTACGAGAATTCCCTATTAAGCGAATGATGAAAAGTAGAACAGTCGCAATAAGAGCATGGACTTAGTATTGCACTATCTCCTGGAGGTCAACAGAGGGCTATTACTTGCGCAACAGGTTAAAGATTGTGAATAGTTACCAGCAGTCATTTACCCGCTTATAACAAGCGAGGCAGTTGTAATGATAGCTCAGAAGGATTATGCAAGGCTTCGTAAGGGAGAACGCATATACCC  >  NC_000913/1292948‑1293437

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.