| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,883,678 | G→A | P18S (CCA→TCA) | dnaA ← | chromosomal replication initiator protein DnaA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,883,678 | 0 | G | A | 97.1% | 199.0 / ‑2.1 | 68 | P18S (CCA→TCA) | dnaA | chromosomal replication initiator protein DnaA |
| Reads supporting (aligned to +/- strand): ref base G (2/0); new base A (27/39); total (29/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.97e-01 | |||||||||||
GCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTT‑TGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGGTAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCT > NC_000913/3883434‑3883922 | gCAGGGGCCGCGACTTGGCGCGCCACTGCCGCTTGTGGCGTTTGCTTACCCGGTT‑TGGGGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGGTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACt < 2:400218/250‑1 (MQ=255) aGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTT‑TGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCAt > 1:169168/1‑251 (MQ=255) ccGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTT‑TGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCAATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAACACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATCACTCATCCTGc > 2:171130/1‑251 (MQ=255) gTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTT‑TGGTGCCGACTTCAAAACGACGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAATACGGTTTGGCGCGTCCAGGCCCAGCGTGTTATCGCTCAGTTCCGCCTGCACTGGGCGTATCCACATACTGCATTCTGTGGCTGATAACTCATCCTGCAATCggg > 1:284127/1‑251 (MQ=255) gTTGCTCGTCACTGCCGCTTGAGGCGTTTGCGTCACCGGTT‑TGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTTATCACTCATCCTGCAATCggg > 2:336857/1‑251 (MQ=255) gCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTT‑TGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCa > 1:62393/1‑250 (MQ=255) cGTCACTGCCGCGTGTGGCGTTTGCGTCACCGGTT‑TGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCAGCCTGCAATCGGGCAAGa < 1:358027/250‑1 (MQ=255) gCCGCTTGCGGCGTTTGAGTCACCGGTT‑TGGTGCCGACTTCACAAAGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATAGAGGACAAAACGGTTTGGCGCGTACTGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCACTGGGCGTATCCACATACTGACTTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAAACActgctg > 2:208600/1‑251 (MQ=255) gCCGCTGGTGGCGGGTGCGTCCCCGGTTGTGG‑GCCTACCTCAAAACGCAGCTGTGGGGCCTCCGCTCCGCAGAAACTGGATAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAAGCGAGGACAAAACGGTTTGGCGCGTACAGGGCCATCGTGTTATCGCTCAGTTCCGTCCGCAATGGGCGTATCCACCTACTGAATTCTGTGGCTGATAACTCAGCCTGCAATCGGGCAAGCCActgc < 2:91493/249‑1 (MQ=255) gCGTTTGCGTCACCGGTT‑TGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGctaa < 2:169168/251‑4 (MQ=255) aCCGGTT‑TGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACAcggc > 1:459296/1‑251 (MQ=255) gTT‑TGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCACTGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGAc > 1:284333/1‑251 (MQ=255) ggtgctgactcaaaaaCGCATCTTTGTGGCAACCGCTCCGCAGAATCTGGTTATCAGTCCAGTGATATTATTAAGGTATGTGTCCCGTACCCAATCGAGTATATAACGGTTTGGCGCGTACAGGGCCAGCTTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCCCATACTGAATTCTGTGGCTGATAACTGATCCTGCCAGCGGGCAAGACTCTGCTGCCAAAGCGAAAGTGACACGGCCGAcgcc < 2:318385/238‑4 (MQ=255) ggTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCa < 1:159108/251‑1 (MQ=255) ccacattaaaacggtggtgtgGGGCTTCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGa < 2:340441/234‑1 (MQ=255) cGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGa < 1:62669/251‑1 (MQ=255) cGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTAAAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCTAAGCGAAAGTGACACGGCGGACTCCACTCg > 1:208241/1‑250 (MQ=255) tCAAAACGCAGTTGTGGGTCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACa < 2:138881/249‑1 (MQ=255) tCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACaa > 1:201728/1‑250 (MQ=255) cAAAACGCAGGTGTGGGGCTTCCGCACCGCAGAAACTAGTTAGCAGTCCAGTGATATTATTAAGGTGCTTGTCCCGTACCCAAACGAGTACAAAACGGTTTGGCGCGTACAGGGTCAGCGTGTTATCGCTGATGTCCGCCTGCAATGGGTGTAGCCACATACTGAATTCTGTGTCTGATAACTCATCCTGCTATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACaaaa < 2:158787/251‑1 (MQ=255) aaaaCGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAg < 1:240727/251‑1 (MQ=255) aaaCGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATCTTCTAAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGATGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAACGAAAAAGACACGGCGGACACCAATCGCAAAAAAGt > 1:439340/1‑251 (MQ=255) aacgcgtcttttgggCATCCGCTCCGGAGAAACTGGTTAGCAGTCTATTGATTGTATTAGGGTGCTGGTCACGTGCCCATTCTAGGACAAAACGGTTTAGCGCGTGCAGGGCCAGCGTGTTATCGCGCAGTTCCGCCTGCGATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCAGCCTGCAATCGGGCAAGCCACTGCTGCCCAAGCGAAAGTGACTCGGCGGACTCCTCTCGAACCAAAGtt < 2:301926/239‑2 (MQ=255) ggggCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATAGTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGTCCAGCGTGTTATCGCGCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGATTCCACTCGAACAAAAGTCGATAATGACt < 1:172578/250‑1 (MQ=255) gggCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTACGGTACTTGTCCCGTCCCCAATCGAGGACAAAACGGTTTGGCGCGTACCGGGCCAGCGTGTTATCGCTAAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAAACCATCTTGACATCGGGCAAGACACTGCTGCCCAAGCGAAAGAGACACGGCGGCCTCCAATCGAAccaacgccggtaatgccta > 2:41791/1‑232 (MQ=255) gggCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGAAAATGACTa > 1:55069/1‑250 (MQ=255) cgctccgcAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGa > 1:80946/1‑250 (MQ=255) ccgcATAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGGCACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACa < 2:427198/250‑1 (MQ=255) ccgcAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAAc < 2:37579/249‑1 (MQ=255) aGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTTCCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCAt < 2:337705/251‑1 (MQ=255) aCTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGAtt < 1:336857/251‑1 (MQ=255) aCTGGTTAACAGACCATTGATATTATTAAGGTACTTGGCCCGTTCCCAATCGAGGACAAAACGGTTGGGCGCGGACAGTGCCAGCGTGTTATCGCTCATTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCTCTCGAACAAAAGTCTATAATGACTAAGGCTGAAACATTCATGAtt < 2:5543/251‑1 (MQ=255) gTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCCCTCGAACAAAAGTCGATAATGACTAAGGCTGAAACAtt > 2:202840/1‑233 (MQ=255) gTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACAtt < 1:202840/233‑1 (MQ=255) ccATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGacgtacgt < 1:56084/250‑1 (MQ=255) tGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGAACGTCGaa > 1:321973/1‑250 (MQ=255) attaAGGTACTTGTCCCGTTCCCAATCGAGGACAAAACGGTTTGGCGCGTACATGGCCAGCGTGTTATCGATCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGAccc < 1:121810/250‑1 (MQ=255) aGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGGTAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGA‑AATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCttt > 2:107627/1‑250 (MQ=255) tGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCCCTCGAACAAAAGGCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTg > 2:382031/1‑251 (MQ=255) gTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCAc < 1:78182/251‑1 (MQ=255) gTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCAc < 2:85853/251‑1 (MQ=255) ccAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAAc < 1:414960/251‑1 (MQ=255) cAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAAcc < 2:459296/251‑1 (MQ=255) cGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGAGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGGACAAAAGTCGCTAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAGGACCCTGCTTGAGGGTGACGCACGAACCGCTg > 2:175301/1‑251 (MQ=255) ggACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCt < 1:244992/251‑1 (MQ=255) cGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCATGCTTGAGGGTGACGCCCGAACCGCTGTCTGCGGTtat > 2:201575/1‑251 (MQ=255) gTTTGGCGGGTGCAGGGCCTGCGTGTGATCGCTAATTCCCGCCTGCAAGGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTGATCCTGCAATCGGGCAAGACACTGCGGCCAAAGCGATAGTGACACGGCGTACTCCACTCGATCAAAAGTCGATAATGACTAAGTCTGAAACATTCATGATCGTTGCCGGACGTCGAAAAGACCCTGCTTGAGGGTTACGCACGAACCGCTGTTTGCGGTTatat < 2:48366/251‑1 (MQ=255) gTTTGGCGCTTACAGGGCCAGCGTGTGATCGCTCAGTTCCGCCTTCAATGGGCGTATCCACATACGTAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAATACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCAGTTatat < 2:394561/251‑1 (MQ=255) tGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGc < 2:84912/250‑1 (MQ=255) tGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGc < 1:458483/250‑1 (MQ=255) cgcgTACAGAGCAAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGACTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAACGAAAGTGAGACGGCGGACTCCCCTCGAACACGAGTCGATAATGCCTAAAGCTGAACCATTCATGATTGTTGACGTACGTCGAAACGACCCTGCTTGGGAGTGACGCACGAACCGCTGTTTGCGGTGATATGCCCgc > 2:388213/1‑250 (MQ=255) gggCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGTGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATc < 1:290936/251‑1 (MQ=255) gCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAACGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATAATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCt > 1:18144/1‑251 (MQ=255) cGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCaaa < 1:408953/251‑1 (MQ=255) tgtTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGGTAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAAc > 1:93055/1‑251 (MQ=255) gtTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGACTTCTGTGGCTGATAACTCATCCTGCAACCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGGGGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCTCTGTCTGCGGTTATATGCCCGATCAAGATCCTGTAAAAc < 1:167567/250‑1 (MQ=255) tCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGGACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGGTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCgg > 1:230208/1‑251 (MQ=255) cAATGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCAGCCTGCAATCGGGCAAGACACTTCTGACAAAGCGAAAGTGACACGGCGGACTTCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGGTTGAGGGTGACGCACGAACTGCTGTCTGCGGTTATAGGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGc < 2:426787/251‑1 (MQ=255) cAATGGGCGTATCCACATACTGAAGTCGGGGGCTGATAACTCATCCTGCAAGCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGc < 2:468084/251‑1 (MQ=255) aTGGGCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGAGCCGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCCTAGCCt > 2:337852/1‑251 (MQ=255) tgagCGTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGCCTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGGGACGCACGAACAGCTGTCTGCGGTTCTATGCACGGTCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCt > 1:435559/4‑250 (MQ=255) gTATCCACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTg > 1:443170/1‑251 (MQ=255) ccACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCgg < 2:319443/188‑1 (MQ=255) ccACATACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCgg > 1:319443/1‑188 (MQ=255) cacaTACTGAATTCTGTGGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCaa < 1:463645/251‑1 (MQ=255) aCTGAATTCTGGGGCTGATAACTCAGCCTGCAATCGGGCAAGACACTGCGGCCAAAGCGAAAGTGACACGGCGGACTCCAACCGAACAAAAGTCGATAATGACTAAGGCTTAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGAt < 2:183593/251‑1 (MQ=255) gtgGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGttt < 1:171130/250‑1 (MQ=255) tgGCTGATAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTtct > 1:96502/1‑251 (MQ=255) | GCAGGGGCCGCGACGTTGCTCGTCACTGCCGCTTGTGGCGTTTGCGTCACCGGTT‑TGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGATATTATTAAGGTACTTGTCCCGTACCCAATCGAGGACAAAACGGTTTGGCGCGTACAGGGCCAGCGTGTTATCGCTCAGTTCCGCCTGCAATGGGCGTATCCACATACTGAATTCTGTGGCTGGTAACTCATCCTGCAATCGGGCAAGACACTGCTGCCAAAGCGAAAGTGACACGGCGGACTCCACTCGAACAAAAGTCGATAATGACTAAGGCTGAAACATTCATGATTGTTGACGTACGTCGAAAAGACCCTGCTTGAGGGTGACGCACGAACCGCTGTCTGCGGTTATATGCCCGATCAAGATCCTGCAAAACGATCGGGACCGCGGATCATAGCCTAAACTGCGCAAGAGATCTTCTGTTTCT > NC_000913/3883434‑3883922 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |