| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,474,425 | T→C | K43R (AAA→AGA) | rpsL ← | 30S ribosomal subunit protein S12 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,474,425 | 0 | T | C | 96.9% | 205.2 / NA | 65 | K43R (AAA→AGA) | rpsL | 30S ribosomal subunit protein S12 |
| Reads supporting (aligned to +/- strand): ref base T (0/2); new base C (26/36); total (26/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.10e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.75e-01 | |||||||||||
GCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGAAATATACAACGA > NC_000913/3474192‑3474669 | ccTTCCCGCCATACTGGGAACGAGCCTGCTTACGGTTTTTAACGCCGGAGCAGGCAAGCGCCCCACGTACGGTGTGGTAACGAACACCCGGGAGGTTTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGtatat < 2:387593/250‑1 (MQ=255) agaCTTGGACCGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACTCCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTAc < 1:58377/249‑1 (MQ=255) ttGGACCGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑c > 1:384748/1‑251 (MQ=255) gAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACTCCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGcc < 1:56889/251‑1 (MQ=255) ccggcgctcttccgatctcgcgggcgCAGTCAAGCGCCCCACGTACGGGGGGGGAACGAACCCCCGGGAGGTCTTTAACCCGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGtttt < 2:47942/226‑1 (MQ=255) ctaaCGGTCGTTAACGCCGGAGCAGTCAAGCGCACCACGTCAGGTGTGGTAACGAACACCCGGGAGGGCTTTAACACGACCGCCACGGATCCGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTAGAAACCGTTAGTCAGACGAACACGGCATCCGTTACGCAGAGCGGAGTTCGGTTTTCTAGGAGTGAGAGAATATCCAAGAGTACATA‑CACCACGTTTTcgcg > 2:363564/4‑251 (MQ=255) cGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGtttt > 1:47942/1‑233 (MQ=255) cGGAGCAGTCAAGCGCACCCCGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAgcgc > 2:241546/1‑250 (MQ=255) caccacGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTc > 2:181158/1‑251 (MQ=255) tACGGTGTGGTAACGAACACCCGGAAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCCCTTCGAAACCGATAGTCAGACAAACACGGCATACTTTACGCAGCGCGGGGTTCGGTATTCTAGGAGAGGTAGTATATACAAGAGTACATA‑CGACACGTTTTTGCGGGCATGCTTCCCGCTCAGGCACGATTCTTTTcaccattt > 2:272294/1‑244 (MQ=255) cgtgaggggaccGAACACCCGGGAGGTTTTTACCTCACCCGCCACGTATCAGTATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTTTATACTCGAGTACATA‑CGCCACGTTTTTGCGGGAATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACttt < 1:276954/239‑1 (MQ=255) ggTGTGGTAACGAACACCCGGGAGGTCTTTACCACGACCGCCACGGCTCAGGATCACGGAGGGCTCCTGCAGGTTGTGACATTCACCACCGATGTAGGAAGTCACTTCGAATCCGTTAATCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGCGTGGTAGAATATACACGAGGA‑ATAACGCAACGTTTTTGCGGGCATGCTTCCAGCTCAGGCACGTTCTTTTTCGCAACTTTgg > 2:12405/1‑250 (MQ=255) aacgcatccccgggggggacgttAACTCGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGGTGGGTCCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGGCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCAc < 2:192471/229‑1 (MQ=255) aaCGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGGATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACg < 1:41607/250‑1 (MQ=255) cGAACACCCGGGAGGTCTTTAACACGAACGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTgg < 1:396797/251‑1 (MQ=255) gAACACCCGGGAGGTCTTTAACACGACCGCCACGAATCAGGATCACGGAGTGCGCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACAAGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCAAGTTTTTGCGGGAATGCTTCCAGCGCAGGCACGATGCTTTTCGCATATTTGAGGGCACGTGGt > 2:362333/1‑251 (MQ=255) acacCCAGGAGGTCTTTAACCCGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTTACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGttt < 1:415586/251‑1 (MQ=255) ccGGGAGGTCTGTAACACGCCCGCCACGGATCAGGATCTCGGAGTGCTCCTGCAGGTTGTGTCCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGt < 1:470776/251‑1 (MQ=255) aGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTAcc > 2:27843/1‑249 (MQ=255) tttAACCCTACCGCCACGGATCAGGATCACGGGGTGCTCCTGAAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTgt < 2:295469/250‑2 (MQ=255) aaCACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTaa < 1:351157/251‑1 (MQ=255) acacGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAAc > 1:420418/1‑251 (MQ=255) gACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGtt > 1:289897/1‑251 (MQ=255) ccACGGATCAGGATAACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAATTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTGTACGCAGCGCGGTGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACGGTTGCCAt < 2:389553/251‑1 (MQ=255) gatcaggatcaCGGAGTGCGCATGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGCACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGCGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCCTGCTTCCAGCGAAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGGTTGCGTACCAGCTGGTTAACTGTTgaaatta > 2:341348/1‑242 (MQ=255) gatcaCGGAGTGCTCCTGCAGGTTGTGTCCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTcc < 2:349541/251‑1 (MQ=255) ggTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTGTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTa < 2:467027/250‑1 (MQ=255) aGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGtttt > 2:386246/1‑250 (MQ=255) aGTGCTCCTGCAGGGTGTGACCGTCACCACCTATGTAGGAAGTCACTTCGAATCCGTTAGTCAGACGAACACCGCATACTTTACGCAGCGCGGAGTTCGGTTTGCAAGGAGTGGTAGTATTTACACGAGTACATA‑CGCCGCTTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTTCGATCTCGTGGTTTGCGGACCAGTTGGTTAATTGTTGCCATTAAAGAGCTCCTCGtttt < 1:320109/250‑1 (MQ=255) ccTGCAGGTTGTGGCCTTCACCACCGATGTAAGAAGTCACTTCGAAACCGTTAGTCATACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGTGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGAATGCTTCCAGCACAGGCACGTTGCTTTTAGCAACTTTGCGAGCAAGTGGTTTGCGTACCAGCTGGTTAACTGTGGCCATTAAATAGCTCCTGTGTTTGGCtttt > 2:103309/1‑251 (MQ=255) ccTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGATTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCtttt < 1:122631/251‑1 (MQ=255) ccTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCtttt < 1:162330/251‑1 (MQ=255) cTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGc < 2:314376/185‑1 (MQ=255) cTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGc > 1:314376/1‑185 (MQ=255) tGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGc > 1:240869/1‑251 (MQ=255) gCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGc < 1:79552/250‑1 (MQ=255) cAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGATTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCtt < 1:78120/251‑1 (MQ=255) gTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTCCCAGCTGGTTAACTGTTGCCATTAAATAGCTACTGGTTTTAGCTTTTGCTTCGt > 2:466873/1‑251 (MQ=255) gaacTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCATACGAACACGGCATACTTTACGCAGCGCGGAGTCCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAac < 2:61494/247‑1 (MQ=255) cccTTCACCACCGATGTAGGAAGGCACTTCGAAACCGTTAGGCAGACGAACACGTCATACTTTACGCAGCTCGGAGTTCGGTTGTTTAGGAGGGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGTATGCTTCCAGCGCAGGCACGTTGCTTTTCGCATCTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGTTTTTAGCTTTTGCTTCGTaaatac < 2:374098/250‑4 (MQ=255) tCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGTGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGTTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGta < 2:163706/250‑1 (MQ=255) accaccGAGATAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCTGGCAAGCTTGCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTTGTTAACTGTTGCCATTAAATAGCTTCTGGTTTTAGCTTTTGCTTCGTAAACACGtaata < 2:45398/251‑1 (MQ=255) cacccGAGGTAAGAAGACACTGCGAAACCGTTAGTCAGCCGACCTCGGCATTCTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACTCGAGTACATA‑CGCCACGTTTTTGCTGGCATGCTTCCAGCGCAGGCACGTTTCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTTGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACTCGtaataa < 2:359804/248‑1 (MQ=255) accGAGGTAGGAAGTCACGACGAATCCGTTAGTCTGACTAAGTCGGCATACTTTTCGCAGCTCGGAGTTCAGTTTTCTAGGAGTGGTAGTATATACACGTGTACATA‑CGGCTCGTTTTTTTGGGCATGCGTCCAGCGCAGGCTCGTTGCTTTTCGCAACTTTGCGAGCACGGGTTTTGCTTACCAGCTGGTTAACTGTTGCCATTAAATAGGCCCCGGTTTTAGCTTTTGCTTCGTAAACACGTAATaaat < 2:420741/251‑2 (MQ=255) aggaagctacgtCGAAACCGTTAGTCAGACGAACATGGCATTCTTTTCGCCGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGATTACATA‑CGCCACGTTTTGGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCTAGCACGTGGTTTGCTTTCCTGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCTTAAACACTGAATATAACGTCCTc < 2:423631/239‑1 (MQ=255) gTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTCGCTTTTGCTTCGTAAACTCGTAATAAAACGTCCTcacaca > 2:239287/1‑250 (MQ=255) ccTTCGAAACCGTTAGTCAGACGCACACGGCATACGTTACGCAGCGCGGAGTGCGTGTTTCTAGGAGTGGTAGTATATACACGAGTACATT‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAatat < 2:213782/250‑1 (MQ=255) gAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAgg > 1:344260/1‑250 (MQ=255) aaaCCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGCGTTCGGTTTTCTAGGAGCGGTAGTATATACACGAGTACATA‑CGCCCCGTTTTTGCGGGCATGATTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGCGCCCGTGGTTTGCGTACCAGCTGGTTACCTGTTGCCAATAAATAGCTCCTGGTTTTAGCTTTTGCTTAGTAAACACGTAATAAAACGTCCTCACACAATATGAGGAc > 2:432745/1‑251 (MQ=255) cGTTAGTCACACGAACACTGAATTCTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCg < 2:1644/251‑1 (MQ=255) gTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAACTAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACCCAATATGAGGACGCCGAAttt > 2:121484/1‑251 (MQ=255) aGACGAACTCGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCCCGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAg < 1:136999/251‑1 (MQ=255) cGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGc > 2:273046/1‑251 (MQ=255) aaaCACGGCATACGTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCg < 1:189047/250‑1 (MQ=255) cGGCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGcc < 1:27843/251‑1 (MQ=255) gCATACTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCg > 1:401000/1‑250 (MQ=255) aCTTTACGCAGCGCGGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAATTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAg < 1:102608/251‑1 (MQ=255) aCTTTACGCAGCGCGGAGTGCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAg < 1:403609/251‑1 (MQ=255) cgccgcgcGGCGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCAAGTGGTTTGCGTACCAGCTGGTTAACTCTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAATCACGTTATAAAACGTCATCACCCAAAATTAGGACCACGAATTTTAGGTCGGTGCCGAAAAGGTGTc > 2:22035/5‑250 (MQ=255) cGCAGCGCGGATTTCTGTTTTCTAGGAGTGGTAGTATATACTCGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTGCCATCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCa < 2:462146/251‑1 (MQ=255) cgGAGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCCCGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCATCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGAAat > 1:345731/1‑250 (MQ=255) aGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTCACTGTTGCCATTAAATAGCt > 1:30508/1‑148 (MQ=255) aGTTCGGTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCt < 2:30508/148‑1 (MQ=255) ggTTTTCTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACTTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAATAAATATACAACGa < 1:32517/251‑1 (MQ=255) gTTTTCTAGGAGTGGTAGTATATTCACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGAAATATACAACg < 2:453100/249‑1 (MQ=255) | GCTTCACGCCATACTTGGAACGAGCCTGCTTACGGTCTTTAACGCCGGAGCAGTCAAGCGCACCACGTACGGTGTGGTAACGAACACCCGGGAGGTCTTTAACACGACCGCCACGGATCAGGATCACGGAGTGCTCCTGCAGGTTGTGACCTTCACCACCGATGTAGGAAGTCACTTCGAAACCGTTAGTCAGACGAACACGGCATACTTTACGCAGCGCGGAGTTCGGTTTTTTAGGAGTGGTAGTATATACACGAGTACATA‑CGCCACGTTTTTGCGGGCATGCTTCCAGCGCAGGCACGTTGCTTTTCGCAACTTTGCGAGCACGTGGTTTGCGTACCAGCTGGTTAACTGTTGCCATTAAATAGCTCCTGGTTTTAGCTTTTGCTTCGTAAACACGTAATAAAACGTCCTCACACAATATGAGGACGCCGAATTTTAGGGCGATGCCGAAAAGGTGTCAAGAAATATACAACGA > NC_000913/3474192‑3474669 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |