| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,792,209 | G→A | V313M (GTG→ATG) | gabD → | succinate‑semialdehyde dehydrogenase (NADP(+)) GabD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,792,209 | 0 | G | A | 94.8% | 172.8 / 0.6 | 58 | V313M (GTG→ATG) | gabD | succinate‑semialdehyde dehydrogenase (NADP(+)) GabD |
| Reads supporting (aligned to +/- strand): ref base G (1/2); new base A (29/26); total (30/28) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.05e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.55e-01 | |||||||||||
ACCGGTTCGACCGAAATTGGCCGCCAGTTAATGGAACAGTGCGCGAAAGACATCAAGAAAGTGTCGCTGGAGCTGGGCGGTAACGCGCCGTTTATCGTCTTTGACGATGCCGACCTCGACAAAG‑CCGTGGAAGGC‑GCGCTGGCCTCGAAA‑TTCCGCAACGCCGGGCAAACCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCAAAGTGTCGAAAGAAGAGACGTTCGGCCCCCTCGCC > NC_000913/2791966‑2792448 | cccGGTTCGCCCGAATTTGGCCGCCTGTTAATGGAACATGGCGCAAAAGACATCAAGAAGGTGGCGCTGGAGCGGGGCGGAAACGCGCGGTTTACCGTCTTTGCCGATGCCGCCCTCGACAAGC‑CCGTGGAGGGC‑GGGCTGCCCTCAAAA‑TCCCGAAACGCCGGGCAACCCGGC‑GTCGGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCa < 2:280518/249‑1 (MQ=255)acgggTTCGACCGAAATGGGCCGCAAGTTAAGGGAACAGTGCGCGAAAGACATAAAGAAAGTGTCGCGGGAGCTGGGCGGAAACGCGCCGTTTATCGTCTTTGACGATGCCGACCTCGACAAAG‑CCGGGGAAGGC‑GCGCTGGCCTCGAAA‑TTCCGCAACGCCGGGAAAACCGGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCaa < 1:89844/248‑1 (MQ=255) ttCGACCGAAATTGGCCGCCAGTTAATGGAACAGTGCGCGAAAGACATCAAGAAAGTGTCGCTGGAGCTGGGCGGTAACGCGCCGTTTATCGTCTTTGACGATGCCGACCTCGACAAAG‑CCGTGGAAGGC‑GCGCTGGCCTCGAAA‑TTCCGCAACGCCGGGCAAACCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGc > 1:5671/1‑251 (MQ=255) aTTGGCCGCAAGTTAAGGGAACGGGGCGCGAAAGACACCAAGAAAGGGTGGCGGGGGCTGGGCGGTAACGCGCCGTTTATCGCTTTTGACGAGGCCGCCCTCGACAAAG‑CCGTGGAAGGC‑GCGTTGGCCTCGAAA‑TTCCGCAACGCCGGGCAAACCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGa < 1:321196/251‑1 (MQ=255) ggCCGCCAGTTAAGGGAACAGGGCGCGAAAGACATCAAGAAAGGGTCGCTGGAGCTGGGCGGTAGCGCGCCGTTTACGGTCTTGGCCGATGCCGCCCTCGACAACG‑CCGTGGAGGGC‑GCGCTGCCCTCGAAA‑TTCCGCACCGCCGGGCAAACCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACgg < 1:173048/251‑1 (MQ=255) ggCCCCCAGTTAGTGGAAAAGTGAGGGAAAAACAACAAGAAAGTTGCGCGGGGGCGGGGGGGTACCGCGCCTTTTATCGTCTTTGACGATGCCGCCCCCGCAAAAC‑CCGTGGAAGGC‑GCGTGGGCTTCGAAA‑TTCCGCACGGCCGGGCAACCCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACgg < 2:196878/251‑1 (MQ=255) ccgccAGTTAAGGGAAAAGTGCGCGAAAGACATCAAGAAAGTGTCGCTGGAGCTGGGCGGTAACGCGCCGTTTATCGTCTTTGACGATGCCGCCCACGACAAAG‑CCGTGGAAGGC‑GCGCTGGCCTCGAAA‑TCCCGCAACGCCGGGAAAACCGGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGc < 1:259409/251‑1 (MQ=255) aaagggAACAGGGCGCGAAAAACACCAAAAAAGTGTCGCTGGAGCGGGGCGGAAACGCGCCGTTTACCGGCTTGGACGAGGCCGCCCCCGACAAAG‑CCGGGGAAGGC‑GCGCGGGCCTCGAAA‑TCCCGCAACGCCGGGCAAACCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAAc < 1:64448/247‑1 (MQ=255) ggAACAGTGCGCGAAAGACATCAAGAACGTGTCGCTGGAGCTGGGCGGTAACGCGCCGTTTATCGTCTTTGACGATGCCGACCTCGACAAAG‑CCGTGGAAGGC‑GCGCTGGCCTCGAAA‑TTCCGCAACGCCGGGCAAACCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGACAAATTGCAGCAGGCAATGAGCAAACTGCACACCGGCGACGGGCTGGATCACGGCg > 2:383576/1‑251 (MQ=255) gAAAGACATCAAGAAAGTGTCGCTGGAGCTGGGCGGTAACGCGCCGTTTATCGTCTTTGACGATGCCGACCTCGACAAAG‑CCGTGGAAGGC‑GCGCTGGCCTCGAAA‑TTCCGCAACGCCGGGCAAACCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGc > 1:139878/1‑251 (MQ=255) aaaGACATCAAGAAAGTGTCGCTGGAGCTGGGCGGTAACGCGCAGTTTATCGTCTTTGACGATGCCGACCTCGACAAAG‑CCGGGGAAGGC‑GCGATGGCCTCGAAA‑TTCCGCAACGCCGGGCAACCCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGcc < 1:341630/251‑1 (MQ=255) aagccATCAAGAAAGTGTCGGTGGGGTGGGGCGGTAACGCGCCGTTTTCCGGTTTTGCCGATGCCGACCTC‑ACAAAGGCCGGGGAGGGC‑GCGCGGGCCCCGAAA‑TCCCGCAACGCCGGGCAACCCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCg < 1:111467/247‑1 (MQ=255) acacaaagaaggggtggtgggaggggggCGGTACCGGGCCTTTTACCTTCTTTGACGATCCGGACC‑CGGAAAAG‑CCGGGGGAGGCCGCGCTGGCC‑CGAAAATCCCGCAACGCCGGGCAATCCTGC‑GTCGCCGCCAACCGCCTGTATGTGCAGGACGGCTTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGGCACCATCGGGCCGCTg < 2:219611/226‑1 (MQ=255) gtgtCGCTGGAGCTGGGCGGTAACGCGCCGTTTATCGTCTTTGACGATGCCGACCTCGACAAAG‑CCGTGGAAGGC‑GCGCTGGCCTCGAAA‑TTCCGCGACGCCGGGCAAACCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTgctaggtgaaa > 2:304480/1‑240 (MQ=255) gtCGCTGGAGCTGGGCGGTAACGCGCCGTTTATCGTCTTTGACGATGCCGCCCCCGACAAAG‑CCGTGGAAGGC‑GCGCTGGCCTCGAAA‑TTCCGCAACGCCGGGCAAACCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAg < 1:150951/251‑1 (MQ=255) cgcgggAGCTGGGCGGTAACGCGCCGTTTATCGTCTTTGACGATGCCGACCTCGACAAAG‑CCGTGGAAGGC‑GCGCGGGCCTCGAAA‑TTCCGCAACGCCGGGCAAACCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCg < 1:55068/247‑1 (MQ=255) cTGGAGCTGGGCGGTAACGCGCCGTTTATCGTCTTTGACGATGCCGACCTCGACAAAG‑CCGTGGAAGGC‑GCGCTGGCCTCGAAA‑TTCCGCAACGCCGGGCAAACCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGc > 1:272358/1‑205 (MQ=255) gggAGCGGGGCGGTAACGCGCCGTTTATCGTCTTGGACGAGGCCGACCTCGACAAAG‑CCGTGGAAGGC‑GCGCTGGCCTCGAAA‑TCCCGCAACGCCGGGCAAACCGGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTa < 1:175374/250‑1 (MQ=255) cTGGGCGGTAACGCGCCGTTTATCGTCTTTGACGATGCCGCCCTCGACAAAG‑CCGTGGAAGGC‑GCGCTGGCCTCGAAA‑TTCCGCAACGCCGGGCAAACCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCaa > 1:399244/1‑250 (MQ=255) tGGGCGGTAACGCGCCGTTTATAGTCTTTGACGATGCCGACCTCGACAAAG‑CCGTGGAAGGC‑GCGCTGGCCTCGAAC‑TTCCGCAACGCCGGGCAAACATGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGAAAACGGCGTCCCCATCGGGCCGCTGATCGATGAAAAAGCGGTaaacaa > 2:393024/1‑245 (MQ=255) gTAACGGGCCGTTTACCGTCTTTGACGATGCCGCCCTCGACAAAG‑CCGTGGAGGGC‑GCGCGGGCCTCGAAA‑TTCCGCAACGCCGGGCAAACCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGaa < 1:412673/251‑1 (MQ=255) gcgcCGTTTATCGTCTTTGACGATGCCGACCTCGACAAAG‑CCGAGGAAGTC‑GCGCTGGCCTCGAAA‑TTCCGACACGCCGGGCAAACCTGC‑GTCTGCGCCCACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAACAATTGCAGCAGGCAATGAGCAAACTGCACCTCGGCGACGGGCTGGATAACGGCGTAACCATCGGGCCGCGGGTCGATGAAACATCGGTAGCAAAAGAGAAAGAGc > 2:188246/1‑250 (MQ=255) aTCGTCTTTGACGATGCCGACCTCGACAAAG‑CCGTGGAAGGC‑GCGCTGGCCTCGAAA‑TTCCGCAACGCCGGGCAAACCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCg > 1:451091/1‑250 (MQ=255) aTCGTCTTTGACGATGCCGACCTCGACAAAG‑CCGTGGAAGGC‑GCGCTGGCCTCGAAA‑TTCCGCAACGCCGGGCAAACCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGAAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAGGTGGAAGAGCATATTGCCg > 1:445161/1‑250 (MQ=255) cGTCTTGGACGATGCCGACCGCGACAAAG‑CCGTGGAGGGC‑GCGCTGGCCCCGAAA‑TTCCGCACCGCCGGGCAACCCTGC‑TTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGAt < 1:117285/250‑1 (MQ=255) gtgacgatcccgcccgggACAACG‑CGGTGGAGGGC‑GCGCTGCCCTCAAAA‑TTCCGCATCGCCGGGCAAACCTGC‑GTCGGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTg < 2:164590/234‑1 (MQ=255) gACGATGCCGACCTCGACAAAG‑CCGTGGAAGGC‑GCGCTGGCCTCGAAA‑TTCCGCAACGCCGGGCAAACCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGCCGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTgg > 1:155549/1‑250 (MQ=255) aCGATGCCGACCTCGACAAAG‑CCGTGGAAGGC‑GCGCTGGCCTCGAAA‑TTCCGCAACGCCGGGCAAACCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTgg > 1:152768/1‑249 (MQ=255) cGACCTCGACAAAG‑CCGTGGAAGGC‑GCGCTGGCCTCGAAA‑TTCCGCAACGCCGGGCAAACCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGgcg > 1:386456/1‑251 (MQ=255) aaaaaG‑CCGTGGAAGGA‑GCGCTGGCCTCGAAA‑TTCCGCAAAGCCGGGCAAACCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCAAATCGGCGACGGGCTGGATAACGGAGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGAAGATGCGCGGGAGCAAGGCGCGCGCGTg > 1:35892/3‑251 (MQ=255) aaaG‑CCGTGGAAGGC‑GCGCTGGCCTCGAAA‑TTACGCAACGCCGGGCAAACCTGC‑GTCTGCGCCAACCGACTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGCTGCGCTGGAGAAAGGCGACCGCGTggg > 2:184803/1‑250 (MQ=255) gagagggcgcgtggtccgcgaagtgccGCAACGCCGGGACAACCGGC‑TTCGGCCCCTACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTGTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTgcggc < 2:307883/226‑1 (MQ=255) c‑gcgcTGGCCTCGAAA‑TCCCGCGACGCCGGGCAACCCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAg < 1:304480/251‑1 (MQ=255) gcTGGCCTCGAAA‑TTCCGCAACGCCGGGCAAACCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGTACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGCGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAgcgc > 1:20837/1‑251 (MQ=255) cTGGCCTCGAAA‑TTCCGCAACGCCGGGCAAACCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGGGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAgagc > 1:212151/1‑247 (MQ=255) cTGGCCTCGAAA‑TTCCGCAACGCCGGGCAAACCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGGAAAgcgc > 1:303216/1‑250 (MQ=255) ggCCTCGAAA‑TTCCGCAACGCCGGGCAAACCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGGGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGAGAGCGCGTGGTTTGCGGCGGTAAAGCGAACg > 1:325727/1‑251 (MQ=255) ccGCAACGCCGGGCAAACCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGGGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCACGCGCGGGGTTTGCGGCGGGaaaagccacacaaacgcaggcg > 2:446112/1‑232 (MQ=255) ccgcacccccggCAAACCCGCAGTCTGCGTGAGCCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAAATGCAGCAGGCAATGAGCAAACTGCACAACGACGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGAGGCGCTGGCGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCa < 2:147426/241‑1 (MQ=255) cggacaagccagC‑GTTTGCTCCACCCGCCTGTATGTGCAGGACGGCGTGTATGCCCGTTTTGCCGAAAAATTTCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGTAGAAAGGCGCGCGTGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTcc < 1:277474/240‑1 (MQ=255) cGGGCAAACCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAA‑GCGCACGAAAGCGGCGGCAACTTCTTccc > 1:16255/1‑250 (MQ=255) aCCTGC‑GTCTGCGACAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCAGGATAACGGCATCACAATCGGGCCGCTGATCGATGAAAAAGCGGTAGCCAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGGAAAGCGACCGTAAGCGGCGGCCACATCTTCCAGccagc > 1:52505/1‑248 (MQ=255) ccTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCCCGAAAGCCGCGGCAACTTCTTCCAGCCGAcc > 1:115262/1‑251 (MQ=255) cTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCtgg > 1:264663/1‑251 (MQ=255) gcgcCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCtggtg < 2:139878/251‑1 (MQ=255) aaCCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGGGGACGCACGCGGGGGGAACTTCTTCTAGCCGACCCCTCtggtggggtg > 2:389874/1‑247 (MQ=255) aCCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGtt < 1:218127/251‑1 (MQ=255) cGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGGCGTTcc > 1:210459/1‑251 (MQ=255) gCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCg > 1:183916/1‑251 (MQ=255) tGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGGGGACGTTCCGGcc > 1:82192/1‑251 (MQ=255) gTATGGGCAGGACGGCGTGGATGACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACACCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATAGTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTGTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGc < 2:376026/249‑1 (MQ=255) ggCGTGTATGACCGTTTTGCCGAAAAAGTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCAAAGTGTc < 2:183916/251‑1 (MQ=255) ggatgtccGTTTTGCCGAAAAAGTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCAAAGTGTCGaaa < 2:255231/244‑1 (MQ=255) gACCGTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGAGCACg < 1:409427/178‑1 (MQ=255) gTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAAAGCGGCGGCAACTTCTTCCAGCCGGCCATTCTGGTGGACGTTCCGGCCAACGCCCAAGTGTCGAAAGAAGAGACg > 1:221880/1‑251 (MQ=255) gTTTTGCCGAAAAATTGCAGCAGGCAATGAGCAAAATGCACAGCGGCGACGGGCTGTATAACGGCGCCACCATCGGGCCGCTGATCGATGAAAAAGCGGGAGCAAAAGTGGAAGAGCAGATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCAAAGTGTCGAAAGAAGAGACg < 2:448079/251‑1 (MQ=255) aTTGCAGCAGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTATTCCAGCCGACCATTCTTGTGGACGTTCCGGCCAACGCCAAAGTGTCGAAAGAAGAGACGTTCGGCCCCCTcc > 1:73195/1‑250 (MQ=255) gcagcaGGCAATGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCAAAGTGTCGAAAGAAGAGACGTTCGGCCCCCTCGcc < 1:424286/250‑1 (MQ=255) | ACCGGTTCGACCGAAATTGGCCGCCAGTTAATGGAACAGTGCGCGAAAGACATCAAGAAAGTGTCGCTGGAGCTGGGCGGTAACGCGCCGTTTATCGTCTTTGACGATGCCGACCTCGACAAAG‑CCGTGGAAGGC‑GCGCTGGCCTCGAAA‑TTCCGCAACGCCGGGCAAACCTGC‑GTCTGCGCCAACCGCCTGTATGTGCAGGACGGCGTGTATGACCGTTTTGCCGAAAAATTGCAGCAGGCAGTGAGCAAACTGCACATCGGCGACGGGCTGGATAACGGCGTCACCATCGGGCCGCTGATCGATGAAAAAGCGGTAGCAAAAGTGGAAGAGCATATTGCCGATGCGCTGGAGAAAGGCGCGCGCGTGGTTTGCGGCGGTAAAGCGCACGAACGCGGCGGCAACTTCTTCCAGCCGACCATTCTGGTGGACGTTCCGGCCAACGCCAAAGTGTCGAAAGAAGAGACGTTCGGCCCCCTCGCC > NC_000913/2791966‑2792448 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |