New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 275508	0 (0.000)	23 (0.560)	21/466	0.9	95.8%	coding (184/1404 nt)	mmuP	S‑methyl‑L‑methionine transporter
	?	NC_000913	372749 =	2 (0.050)					coding (635/810 nt)	mhpD	2‑hydroxypentadienoate hydratase

GAATGGGTACTTCCGGCGCTGGAAGTGGTGGGGAGCCGCATTCGCGACTGGTCGATTCAGTTTGTCGATACCGTGGCAGATAACGCCTCCTGTGGGGTGTATGTCATCGGCGGTCCGGCGCAACGTCCGGCGGGGTTAGACCTGAAAAACTGCGCCATGAAGATGACGCGTAATAACGAAGAGGTTTCTAGCGGGCGCGGCAGCGAATGCCTGGGACATCCGCTTAATGCGGCCGTCTGGCTGGCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCAACATTGGTACCGATCTGATGATTAAAATTTTGCGTCAC  >  NC_000913/372505‑372995                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                       caaacgcggtataacaaaccttctttggatgtttagatgtccatacgtttagaaggttatatgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacaccggcggcctatcttatttgggggctggtgggctggctggCGCGCa                                                                                                                                                                                                                                                   >  1:258732‑M2/245‑250 (MQ=255)         gtataacaaaccttctttggatgtttagatgtccatacgtttagaaggttatatgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCa                                                                                                                                                                                                                                          <  1:343110‑M2/15‑1 (MQ=255)                  accttctttggattttgagatgtccatacgtttagaaggttatattcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTg                                                                                                                                                                                                                                 <  1:328017‑M2/24‑1 (MQ=255)                         ttggatgtttagatgtccatacgtttagaaggttatatgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgcggctggcctatcttatttgtgcgctggtgggctgggtgtcacgccaaatggccaggatgggggaaacgct                                                                                                                                                                                                                          >  1:321603‑M2/221‑236 (MQ=255)                             atgtttagatgtccatacgtttagaaggttatatgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgcagctggcctatctgcttggggcgctggggggctgggtggCACCCCAAACGGCCACGCTgggggaaccccagcgc                                                                                                                                                                                                                      >  1:16091‑M2/217‑244 (MQ=255)                                         ccatacgtttagaaggttatatgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGatat                                                                                                                                                                                                           <  2:16091‑M2/46‑1 (MQ=255)                                          catacgtttagaaggttatatgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacaccgctggcccatcttattggtgcgctggggggctggcgggCACgcaaaaaggcccgtctgggggaaaccctcggccacgggggtatc                                                                                                                                                                                                          >  1:98198‑M2/204‑229 (MQ=255)                                                tttagaaggttatatgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctgggggtctggctggCACGCAAAAAGGCCAGTCTGggtgaaccgctgggcacccggggaataattcttt                                                                                                                                                                                                   >  1:239493‑M2/198‑235 (MQ=255)                                                         ttatatgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctgggggtctggctggCACGCACAATGGCCCATCTGGGTGGACCGCTGCGCCCCGGGGATATCATTCTTTCCGGGGCAt                                                                                                                                                                                          >  1:10270‑M2/189‑251 (MQ=255)                                                          tatatgcaaacaacacaacataatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCAt                                                                                                                                                                                          <  1:325220‑M2/63‑1 (MQ=255)                                                          tatatgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCAt                                                                                                                                                                                          <  1:219771‑M2/63‑1 (MQ=255)                                                             atgcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgatttgtgcgctggggggctggctggGACGCAAAAAGGCCAGTCTGGGTGTACAGCTGCGCACCGGGGGTATCCATCTTTCCGGGGCattt                                                                                                                                                                                        >  1:424715‑M2/185‑248 (MQ=255)                                                               gcaaacaacacaacaaaatgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGt                                                                                                                                                                                     <  1:229312‑M2/68‑1 (MQ=255)                                                                                atgcgccactgaagcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATc                                                                                                                                                                                                          <  1:355884‑M2/47‑1 (MQ=255)                                                                                            agcgcacaatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGt                                                                                                                                                       <  2:62582‑M2/98‑1 (MQ=255)                                                                                                  caatgaaaacgcgtcacctgatgatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggggcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGaa                                                                                                                                                 <  2:239493‑M2/104‑1 (MQ=255)                                                                                                   aatgaaaacgcgtcacctgattatgctttccttgggcggcgtgattggcacaggattattcttcaataccgggtacatcatttccaccactggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAg                                                                                                                                                <  2:12456‑M2/105‑1 (MQ=255)                                                                                                                                                                                              ggagcggcgggaacgctgctggcctatctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCAtt                                                     <  1:35311‑M2/196‑1 (MQ=255)                                                                                                                                                                                                          aGCGCATGCCTGGGACATCCGCTTAATGCGGCCGTCTGGCTGGCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCAAATTGAAGGCATAGGTTCAGTTGCTGCGACCTTTTCAAGCGCAGCCCCCAAAGGGAGTTTGGCATGAGTAAGCGTAAAGTCGCCCATATCGGGTCTGGc                                         >  2:253350/1‑251 (MQ=255)                                                                                                                                                                                                                       atctgattggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTAGCCATTATCGGTTCTGGCAACATTGGTACCg                            >  1:338038‑M2/31‑251 (MQ=255)                                                                                                                                                                                                                       agtggattgtggcgcctgtggtctggctggCACGCAAAATTGCCCGTTTGGGTGATCCTCTGGGCACCGGAGATATCATTCTTACCGGGGCGTTAGGTCCGATGGTGGCTGTGAATGCGGGCGATCGTTTTGAAGCCCATAGTGAAGGCATATGTTCATTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGGCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCGGGCAACATTGGTAcc                             <  2:161781‑M2/220‑1 (MQ=255)                                                                                                                                                                                                                               ggtgcgctggtggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCAACATTGGTACCGATCtgatg                    <  1:400584‑M2/229‑1 (MQ=255)                                                                                                                                                                                                                                gtgcgctggtgggctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCAACATTGGTACCGATCtgatga                   <  1:366835‑M2/230‑1 (MQ=255)                                                                                                                                                                                                                                gcgcgtgggtgtcttggctggcACGCAAAATGTGCAGGCTTGGTGAACCGCTGAGCTACGGAGATATCATTCTGACCGGGGCATTAGGTCCGATGGTGGCGGGTAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCAGAGGTCCAGTTGCTGCGACATTTTCACGCTCAGCCCCAAAAGTAAGTCTGTCATGAGGAAGCGTAAAGTCGCCATTATCGGTTCTGGCAACATTGTTACCGATCtgatg                    <  2:343389/236‑1 (MQ=255)                                                                                                                                                                                                                                 tAATGCGGCCGTCTGGCTGGCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCAACATTGGTACCGATCtgatg                    <  1:212410/249‑1 (MQ=255)                                                                                                                                                                                                                                        gttgTCTGGCTGGCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCTCCATTATCGGTTCTGGCAACATTGGTACCGATCTGATGATTAAAAtt           <  2:277224/248‑1 (MQ=255)                                                                                                                                                                                                                                          ggtctggctggCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGTGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCAACATTGGTACCGATCTGATGATTAAAAtttt         <  1:301501‑M2/240‑1 (MQ=255)                                                                                                                                                                                                                                                gctggcACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCAACATTGGTACCGATCTGATGATTAAAATTTTGCGTcc   >  1:306666/1‑250 (MQ=255)                                                                                                                                                                                                                                                 ctggcACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCAACCTTGGTACCGATCTGATGATTAAAATTTTGCGTCAc  >  1:267629/1‑251 (MQ=255)                                                                                                                                                                                                                                                     |                                                                                                                                                                                                                                                       GAATGGGTACTTCCGGCGCTGGAAGTGGTGGGGAGCCGCATTCGCGACTGGTCGATTCAGTTTGTCGATACCGTGGCAGATAACGCCTCCTGTGGGGTGTATGTCATCGGCGGTCCGGCGCAACGTCCGGCGGGGTTAGACCTGAAAAACTGCGCCATGAAGATGACGCGTAATAACGAAGAGGTTTCTAGCGGGCGCGGCAGCGAATGCCTGGGACATCCGCTTAATGCGGCCGTCTGGCTGGCACGCAAAATGGCCAGTCTGGGTGAACCGCTGCGCACCGGAGATATCATTCTTACCGGGGCATTAGGTCCGATGGTGGCGGTGAATGCGGGCGATCGTTTTGAAGCCCATATTGAAGGCATAGGTTCAGTTGCTGCGACATTTTCAAGCGCAGCCCCAAAAGGAAGTCTGTCATGAGTAAGCGTAAAGTCGCCATTATCGGTTCTGGCAACATTGGTACCGATCTGATGATTAAAATTTTGCGTCAC  >  NC_000913/372505‑372995

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.